RNA–Protein interactions for RNA: ENST00000615665.4

SSBP2-220, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene SSBP2, Length 4,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-220ENST00000615665 FAM231DQ6ZW35 169 aa11.22□□□□□ -0.61
SSBP2-220ENST00000615665 LYPD1Q8N2G4 141 aa11.22□□□□□ -0.61
SSBP2-220ENST00000615665 C22orf46C9J442 243 aa11.21□□□□□ -0.61
SSBP2-220ENST00000615665 LINC00614P0C842 121 aa11.21□□□□□ -0.61
SSBP2-220ENST00000615665 TRAV8-6A0A0B4J262 113 aa11.21□□□□□ -0.61
SSBP2-220ENST00000615665 YPEL4Q96NS1 127 aa11.21□□□□□ -0.61
SSBP2-220ENST00000615665 PTPRQQ9UMZ3 2332 aa11.21□□□□□ -0.62
SSBP2-220ENST00000615665 SMIM27A0A1W2PRY6 76 aa11.21□□□□□ -0.62
SSBP2-220ENST00000615665 IGLC1P0CG04 106 aa11.21□□□□□ -0.62
SSBP2-220ENST00000615665 RITA1Q96K30 269 aa11.21□□□□□ -0.62
SSBP2-220ENST00000615665 MRPL27Q9P0M9 148 aaKnown RBP11.21□□□□□ -0.62
SSBP2-220ENST00000615665 PRSS46E5RG02 174 aa11.21□□□□□ -0.62
SSBP2-220ENST00000615665 M0R3E3 92 aa11.21□□□□□ -0.62
SSBP2-220ENST00000615665 MGPP08493 103 aa11.21□□□□□ -0.62
SSBP2-220ENST00000615665 MORN5Q5VZ52 161 aa11.21□□□□□ -0.62
SSBP2-220ENST00000615665 NOTCH2Q04721 2471 aa11.2□□□□□ -0.62
SSBP2-220ENST00000615665 IGKV2-40A0A087WW87 121 aaPredicted RBP11.2□□□□□ -0.62
SSBP2-220ENST00000615665 E7EUB6 86 aa11.2□□□□□ -0.62
SSBP2-220ENST00000615665 IGKV2D-40P01614 121 aaPredicted RBP11.2□□□□□ -0.62
SSBP2-220ENST00000615665 RPL13AP40429 203 aaKnown RBP11.2□□□□□ -0.62
SSBP2-220ENST00000615665 ID1P41134 155 aa11.2□□□□□ -0.62
SSBP2-220ENST00000615665 ORMDL3Q8N138 153 aa11.2□□□□□ -0.62
SSBP2-220ENST00000615665 SLC50A1Q9BRV3 221 aa11.2□□□□□ -0.62
SSBP2-220ENST00000615665 A8MWP6 167 aa11.2□□□□□ -0.62
SSBP2-220ENST00000615665 PSG3Q16557 428 aa11.2□□□□□ -0.62
SSBP2-220ENST00000615665 CACNA1AO00555 2505 aa11.2□□□□□ -0.62
SSBP2-220ENST00000615665 FABP5P3A8MUU1 101 aa11.19□□□□□ -0.62
SSBP2-220ENST00000615665 H3BUT2 72 aa11.19□□□□□ -0.62
SSBP2-220ENST00000615665 C3orf79P0CE67 100 aa11.19□□□□□ -0.62
SSBP2-220ENST00000615665 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.19□□□□□ -0.62
SSBP2-220ENST00000615665 CHCHD1Q96BP2 118 aaKnown RBP11.19□□□□□ -0.62
SSBP2-220ENST00000615665 ZNF492Q9P255 531 aa11.19□□□□□ -0.62
SSBP2-220ENST00000615665 ASPHD1Q5U4P2 390 aa11.19□□□□□ -0.62
SSBP2-220ENST00000615665 MYOZ3Q8TDC0 251 aa11.19□□□□□ -0.62
SSBP2-220ENST00000615665 SNHG12Q9BXW3 62 aa11.19□□□□□ -0.62
SSBP2-220ENST00000615665 C7orf69Q9H7B7 122 aa11.19□□□□□ -0.62
SSBP2-220ENST00000615665 IGLV2-23P01705 113 aa11.19□□□□□ -0.62
SSBP2-220ENST00000615665 POLR3KQ9Y2Y1 108 aaPredicted RBP11.19□□□□□ -0.62
SSBP2-220ENST00000615665 INS-IGF2F8WCM5 200 aa11.19□□□□□ -0.62
SSBP2-220ENST00000615665 FBLN7Q53RD9 439 aa11.19□□□□□ -0.62
SSBP2-220ENST00000615665 BPESC1Q9GZL8 116 aa11.19□□□□□ -0.62
SSBP2-220ENST00000615665 HCFC1P51610 2035 aa11.19□□□□□ -0.62
SSBP2-220ENST00000615665 PATE2Q6UY27 113 aa11.18□□□□□ -0.62
SSBP2-220ENST00000615665 FAM181BA6NEQ2 426 aa11.18□□□□□ -0.62
SSBP2-220ENST00000615665 GNLYP22749 145 aa11.18□□□□□ -0.62
SSBP2-220ENST00000615665 C18orf32Q8TCD1 76 aa11.18□□□□□ -0.62
SSBP2-220ENST00000615665 FAM167A-AS1Q96KT0 104 aa11.18□□□□□ -0.62
SSBP2-220ENST00000615665 HIST1H4GQ99525 98 aa11.18□□□□□ -0.62
SSBP2-220ENST00000615665 COL25A1Q9BXS0 654 aaPredicted RBP11.18□□□□□ -0.62
SSBP2-220ENST00000615665 CUL9Q8IWT3 2517 aa11.18□□□□□ -0.62
SSBP2-220ENST00000615665 FAM208BQ5VWN6 2430 aa11.18□□□□□ -0.62
SSBP2-220ENST00000615665 TRBV19A0A075B6N1 114 aa11.18□□□□□ -0.62
SSBP2-220ENST00000615665 TRAV9-2A0A087WT02 112 aa11.18□□□□□ -0.62
SSBP2-220ENST00000615665 TRAV40A0A0B4J280 105 aa11.17□□□□□ -0.62
SSBP2-220ENST00000615665 NPSP0C0P6 89 aa11.17□□□□□ -0.62
SSBP2-220ENST00000615665 SAA4P35542 130 aa11.17□□□□□ -0.62
SSBP2-220ENST00000615665 CT83Q5H943 113 aa11.17□□□□□ -0.62
SSBP2-220ENST00000615665 DMRTC2Q8IXT2 367 aaPredicted RBP11.17□□□□□ -0.62
SSBP2-220ENST00000615665 ASCL2Q99929 193 aa11.17□□□□□ -0.62
SSBP2-220ENST00000615665 TMEM14CQ9P0S9 112 aa11.17□□□□□ -0.62
SSBP2-220ENST00000615665 NPIPB5A8MRT5 1133 aa11.17□□□□□ -0.62
SSBP2-220ENST00000615665 TGFAP01135 160 aa11.17□□□□□ -0.62
SSBP2-220ENST00000615665 SLAQ13239 276 aa11.17□□□□□ -0.62
SSBP2-220ENST00000615665 FAM106AQ4KMX7 169 aa11.17□□□□□ -0.62
SSBP2-220ENST00000615665 Q6ZWC4 215 aa11.17□□□□□ -0.62
SSBP2-220ENST00000615665 TMEM219Q86XT9 240 aa11.17□□□□□ -0.62
SSBP2-220ENST00000615665 C2orf88Q9BSF0 95 aa11.17□□□□□ -0.62
SSBP2-220ENST00000615665 GFRA4Q9GZZ7 299 aa11.17□□□□□ -0.62
SSBP2-220ENST00000615665 LINC00527Q9UJ94 153 aa11.17□□□□□ -0.62
SSBP2-220ENST00000615665 TNRC6BQ9UPQ9 1833 aaKnown RBP11.17□□□□□ -0.62
SSBP2-220ENST00000615665 NPFFO15130 113 aa11.17□□□□□ -0.62
SSBP2-220ENST00000615665 PDE6HQ13956 83 aa11.17□□□□□ -0.62
SSBP2-220ENST00000615665 PEF1Q9UBV8 284 aaKnown RBP11.17□□□□□ -0.62
SSBP2-220ENST00000615665 PTPN13Q12923 2485 aa11.17□□□□□ -0.62
SSBP2-220ENST00000615665 NDUFB8O95169 186 aa11.17□□□□□ -0.62
SSBP2-220ENST00000615665 AMMECR1LQ6DCA0 310 aa11.17□□□□□ -0.62
SSBP2-220ENST00000615665 PLXNB1O43157 2135 aa11.16□□□□□ -0.62
SSBP2-220ENST00000615665 IGLV1-47P01700 117 aa11.16□□□□□ -0.62
SSBP2-220ENST00000615665 IGHV3-11P01762 117 aa11.16□□□□□ -0.62
SSBP2-220ENST00000615665 HIST1H1AQ02539 215 aaPredicted RBP11.16□□□□□ -0.62
SSBP2-220ENST00000615665 COX6B1P14854 86 aa11.16□□□□□ -0.62
SSBP2-220ENST00000615665 MOB4Q9Y3A3 225 aa11.16□□□□□ -0.62
SSBP2-220ENST00000615665 PHLDA3Q9Y5J5 127 aa11.16□□□□□ -0.62
SSBP2-220ENST00000615665 TMEM160Q9NX00 188 aa11.16□□□□□ -0.62
SSBP2-220ENST00000615665 JKAMPQ9P055 326 aa11.16□□□□□ -0.62
SSBP2-220ENST00000615665 TRAV41A0A0B4J266 112 aa11.15□□□□□ -0.62
SSBP2-220ENST00000615665 H3BRN7 92 aa11.15□□□□□ -0.62
SSBP2-220ENST00000615665 Q8TAT8 98 aa11.15□□□□□ -0.62
SSBP2-220ENST00000615665 MRPL36Q9P0J6 103 aaKnown RBP11.15□□□□□ -0.62
SSBP2-220ENST00000615665 A1L4Q6 167 aa11.15□□□□□ -0.62
SSBP2-220ENST00000615665 SH2D7A6NKC9 451 aaPredicted RBP11.15□□□□□ -0.62
SSBP2-220ENST00000615665 UBE2E1P51965 193 aa11.15□□□□□ -0.62
SSBP2-220ENST00000615665 TMEM75Q8N9X5 138 aa11.15□□□□□ -0.62
SSBP2-220ENST00000615665 PRUNE2Q8WUY3 3088 aa11.15□□□□□ -0.62
SSBP2-220ENST00000615665 CSPG4Q6UVK1 2322 aa11.15□□□□□ -0.62
SSBP2-220ENST00000615665 LYZL1Q6UWQ5 148 aa11.15□□□□□ -0.62
SSBP2-220ENST00000615665 ZNF414Q96IQ9 312 aa11.15□□□□□ -0.62
SSBP2-220ENST00000615665 A0A0G2JLM5 398 aa11.15□□□□□ -0.63
SSBP2-220ENST00000615665 FAM231BA6NCW3 169 aa11.15□□□□□ -0.63
SSBP2-220ENST00000615665 SH2D1AO60880 128 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms