RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 IGKV1-39P01597 117 aa7.55□□□□□ -1.2
CLTCL1-208ENST00000615606 IGKV1D-39P04432 117 aa7.55□□□□□ -1.2
CLTCL1-208ENST00000615606 PSG3Q16557 428 aa7.55□□□□□ -1.2
CLTCL1-208ENST00000615606 HIST1H4GQ99525 98 aa7.55□□□□□ -1.2
CLTCL1-208ENST00000615606 GSN-AS1Q9NRJ2 163 aa7.55□□□□□ -1.2
CLTCL1-208ENST00000615606 COX6CP09669 75 aa7.55□□□□□ -1.2
CLTCL1-208ENST00000615606 C1orf194Q5T5A4 169 aa7.55□□□□□ -1.2
CLTCL1-208ENST00000615606 OCC1Q8TAD7 63 aa7.55□□□□□ -1.2
CLTCL1-208ENST00000615606 TPSG1Q9NRR2 321 aa7.55□□□□□ -1.2
CLTCL1-208ENST00000615606 ZNF415Q09FC8 603 aa7.54□□□□□ -1.2
CLTCL1-208ENST00000615606 CENPVL3A0A0U1RRI6 287 aa7.54□□□□□ -1.2
CLTCL1-208ENST00000615606 C7orf71A4D174 169 aa7.54□□□□□ -1.2
CLTCL1-208ENST00000615606 ZNF843Q8N446 348 aa7.54□□□□□ -1.2
CLTCL1-208ENST00000615606 OR11H1Q8NG94 326 aa7.54□□□□□ -1.2
CLTCL1-208ENST00000615606 ST20Q9HBF5 79 aa7.54□□□□□ -1.2
CLTCL1-208ENST00000615606 MED13LQ71F56 2210 aa7.54□□□□□ -1.2
CLTCL1-208ENST00000615606 AMBPP02760 352 aa7.54□□□□□ -1.2
CLTCL1-208ENST00000615606 C2orf88Q9BSF0 95 aa7.54□□□□□ -1.2
CLTCL1-208ENST00000615606 ATP5LO75964 103 aa7.54□□□□□ -1.2
CLTCL1-208ENST00000615606 PPBPP02775 128 aa7.54□□□□□ -1.2
CLTCL1-208ENST00000615606 PRSS2P07478 247 aa7.54□□□□□ -1.2
CLTCL1-208ENST00000615606 DEFB131AP59861 70 aa7.54□□□□□ -1.2
CLTCL1-208ENST00000615606 WT1-ASQ06250 92 aa7.54□□□□□ -1.2
CLTCL1-208ENST00000615606 ERASQ7Z444 233 aa7.54□□□□□ -1.2
CLTCL1-208ENST00000615606 TTC9CQ8N5M4 171 aa7.54□□□□□ -1.2
CLTCL1-208ENST00000615606 TSKUQ8WUA8 353 aa7.54□□□□□ -1.2
CLTCL1-208ENST00000615606 RCHY1Q96PM5 261 aa7.54□□□□□ -1.2
CLTCL1-208ENST00000615606 IMMP2LQ96T52 175 aa7.54□□□□□ -1.2
CLTCL1-208ENST00000615606 ANKHD1Q8IWZ3 2542 aaKnown RBP7.54□□□□□ -1.2
CLTCL1-208ENST00000615606 A0A1B0GW64 132 aa7.53□□□□□ -1.2
CLTCL1-208ENST00000615606 LGALS3P17931 250 aaKnown RBP7.53□□□□□ -1.2
CLTCL1-208ENST00000615606 SUMO2P61956 95 aaKnown RBP7.53□□□□□ -1.2
CLTCL1-208ENST00000615606 LRRC75A-AS1Q8N1F1 130 aa7.53□□□□□ -1.2
CLTCL1-208ENST00000615606 A0A1B0GUS0 222 aa7.53□□□□□ -1.2
CLTCL1-208ENST00000615606 APOHP02749 345 aaPredicted RBP7.53□□□□□ -1.2
CLTCL1-208ENST00000615606 IGHV4-38-2P0DP08 117 aa7.53□□□□□ -1.2
CLTCL1-208ENST00000615606 CIRBPQ14011 172 aaKnown RBP7.53□□□□□ -1.2
CLTCL1-208ENST00000615606 COPS9Q8WXC6 57 aa7.53□□□□□ -1.2
CLTCL1-208ENST00000615606 ALKBH7Q9BT30 221 aaPredicted RBP7.53□□□□□ -1.2
CLTCL1-208ENST00000615606 ZNF256Q9Y2P7 627 aaPredicted RBP7.53□□□□□ -1.2
CLTCL1-208ENST00000615606 NCOR2Q9Y618 2525 aa7.53□□□□□ -1.2
CLTCL1-208ENST00000615606 WIPF3A6NGB9 483 aa7.52□□□□□ -1.2
CLTCL1-208ENST00000615606 TSSC4Q9Y5U2 329 aaPredicted RBP7.52□□□□□ -1.2
CLTCL1-208ENST00000615606 PPIFP30405 207 aaKnown RBP7.52□□□□□ -1.21
CLTCL1-208ENST00000615606 ARL6IP6Q8N6S5 226 aa7.52□□□□□ -1.21
CLTCL1-208ENST00000615606 SCGB3A1Q96QR1 104 aa7.52□□□□□ -1.21
CLTCL1-208ENST00000615606 PRADC1Q9BSG0 188 aa7.52□□□□□ -1.21
CLTCL1-208ENST00000615606 MRPL27Q9P0M9 148 aaKnown RBP7.52□□□□□ -1.21
CLTCL1-208ENST00000615606 TRAV12-3A0A0B4J271 114 aa7.52□□□□□ -1.21
CLTCL1-208ENST00000615606 CTAG1AP78358 180 aa7.52□□□□□ -1.21
CLTCL1-208ENST00000615606 SRSF3P84103 164 aaKnown RBP7.52□□□□□ -1.21
CLTCL1-208ENST00000615606 TCTEX1D4Q5JR98 221 aa7.52□□□□□ -1.21
CLTCL1-208ENST00000615606 C1QL4Q86Z23 238 aa7.52□□□□□ -1.21
CLTCL1-208ENST00000615606 C19orf84I3L1E1 186 aa7.52□□□□□ -1.21
CLTCL1-208ENST00000615606 NUDT10Q8NFP7 164 aa7.52□□□□□ -1.21
CLTCL1-208ENST00000615606 NUDT11Q96G61 164 aa7.52□□□□□ -1.21
CLTCL1-208ENST00000615606 ZNF414Q96IQ9 312 aa7.52□□□□□ -1.21
CLTCL1-208ENST00000615606 LY96Q9Y6Y9 160 aa7.52□□□□□ -1.21
CLTCL1-208ENST00000615606 PGPEP1LA6NFU8 196 aa7.51□□□□□ -1.21
CLTCL1-208ENST00000615606 LINC00587B1AMM8 73 aa7.51□□□□□ -1.21
CLTCL1-208ENST00000615606 ATP5L2Q7Z4Y8 100 aa7.51□□□□□ -1.21
CLTCL1-208ENST00000615606 HOXA5P20719 270 aa7.51□□□□□ -1.21
CLTCL1-208ENST00000615606 MSMPQ1L6U9 139 aa7.51□□□□□ -1.21
CLTCL1-208ENST00000615606 PMCHL2Q9BQD1 86 aa7.51□□□□□ -1.21
CLTCL1-208ENST00000615606 NOTCH2Q04721 2471 aa7.51□□□□□ -1.21
CLTCL1-208ENST00000615606 PAX9P55771 341 aa7.51□□□□□ -1.21
CLTCL1-208ENST00000615606 LOXL1Q08397 574 aaPredicted RBP7.51□□□□□ -1.21
CLTCL1-208ENST00000615606 FOXL1Q12952 345 aa7.51□□□□□ -1.21
CLTCL1-208ENST00000615606 MEIG1Q5JSS6 88 aa7.51□□□□□ -1.21
CLTCL1-208ENST00000615606 DPH3Q96FX2 82 aa7.51□□□□□ -1.21
CLTCL1-208ENST00000615606 TRGV1A0A0A0MS02 117 aa7.51□□□□□ -1.21
CLTCL1-208ENST00000615606 IGFL4Q6B9Z1 124 aa7.51□□□□□ -1.21
CLTCL1-208ENST00000615606 NPBQ8NG41 125 aa7.51□□□□□ -1.21
CLTCL1-208ENST00000615606 Q8TAT8 98 aa7.51□□□□□ -1.21
CLTCL1-208ENST00000615606 C18orf15Q96N68 181 aa7.51□□□□□ -1.21
CLTCL1-208ENST00000615606 H3BRM9 83 aa7.5□□□□□ -1.21
CLTCL1-208ENST00000615606 FXYD7P58549 80 aa7.5□□□□□ -1.21
CLTCL1-208ENST00000615606 MST1LQ2TV78 715 aa7.5□□□□□ -1.21
CLTCL1-208ENST00000615606 UBE2E2Q96LR5 201 aa7.5□□□□□ -1.21
CLTCL1-208ENST00000615606 OR11H2Q8NH07 326 aa7.5□□□□□ -1.21
CLTCL1-208ENST00000615606 TMEM160Q9NX00 188 aa7.5□□□□□ -1.21
CLTCL1-208ENST00000615606 CREBBPQ92793 2442 aa7.5□□□□□ -1.21
CLTCL1-208ENST00000615606 FOXE3Q13461 319 aa7.5□□□□□ -1.21
CLTCL1-208ENST00000615606 LYPD6Q86Y78 171 aa7.5□□□□□ -1.21
CLTCL1-208ENST00000615606 LINC00469Q8N7U9 141 aa7.5□□□□□ -1.21
CLTCL1-208ENST00000615606 C14orf144Q96I85 54 aa7.5□□□□□ -1.21
CLTCL1-208ENST00000615606 NXT2Q9NPJ8 142 aaKnown RBP7.5□□□□□ -1.21
CLTCL1-208ENST00000615606 SH2D1AO60880 128 aa7.5□□□□□ -1.21
CLTCL1-208ENST00000615606 JOSD1Q15040 202 aaPredicted RBP7.5□□□□□ -1.21
CLTCL1-208ENST00000615606 TRAV8-6A0A0B4J262 113 aa7.49□□□□□ -1.21
CLTCL1-208ENST00000615606 ZFP36P26651 326 aaKnown RBP7.49□□□□□ -1.21
CLTCL1-208ENST00000615606 IFI27P40305 119 aaPredicted RBP7.49□□□□□ -1.21
CLTCL1-208ENST00000615606 TMEM170BQ5T4T1 132 aa7.49□□□□□ -1.21
CLTCL1-208ENST00000615606 LGALS1P09382 135 aaKnown RBP7.49□□□□□ -1.21
CLTCL1-208ENST00000615606 THAP8Q8NA92 274 aa7.49□□□□□ -1.21
CLTCL1-208ENST00000615606 IGHV7-4-1A0A0J9YVY3 117 aa7.49□□□□□ -1.21
CLTCL1-208ENST00000615606 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.49□□□□□ -1.21
CLTCL1-208ENST00000615606 IGLC1P0CG04 106 aa7.49□□□□□ -1.21
CLTCL1-208ENST00000615606 DMRTA1Q5VZB9 504 aa7.49□□□□□ -1.21
CLTCL1-208ENST00000615606 FAM19A2Q8N3H0 131 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms