RNA–Protein interactions for RNA: ENST00000615603.4

FOXP1-222, Transcript of forkhead box P1, human

TSL 5 BASIC

Gene FOXP1, Length 7,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FOXP1-222	ENST00000615603	ITGB1BP1	O14713	200 aa		11.48	□□□□□ -0.57
FOXP1-222	ENST00000615603	ERCC8	Q13216	396 aa		11.48	□□□□□ -0.57
FOXP1-222	ENST00000615603	TYMS	P04818	313 aa		11.48	□□□□□ -0.57
FOXP1-222	ENST00000615603	LMO1	P25800	156 aa		11.48	□□□□□ -0.57
FOXP1-222	ENST00000615603	NIT1	Q86X76	327 aa		11.48	□□□□□ -0.57
FOXP1-222	ENST00000615603		A0A087WWL8	130 aa		11.48	□□□□□ -0.57
FOXP1-222	ENST00000615603	GNB1L	Q9BYB4	327 aa		11.48	□□□□□ -0.57
FOXP1-222	ENST00000615603	LAGE3	Q14657	143 aa		11.48	□□□□□ -0.57
FOXP1-222	ENST00000615603	ATP5L2	Q7Z4Y8	100 aa		11.48	□□□□□ -0.57
FOXP1-222	ENST00000615603	IFI27L1	Q96BM0	104 aa		11.48	□□□□□ -0.57
FOXP1-222	ENST00000615603	WDR86	Q86TI4	376 aa		11.48	□□□□□ -0.57
FOXP1-222	ENST00000615603	PHLDA1	Q8WV24	401 aa	Predicted RBP	11.47	□□□□□ -0.57
FOXP1-222	ENST00000615603	PCNX2	A6NKB5	2137 aa		11.47	□□□□□ -0.57
FOXP1-222	ENST00000615603	IGLV1-44	P01699	117 aa		11.47	□□□□□ -0.57
FOXP1-222	ENST00000615603	SHANK2-AS3	Q9BTD1	123 aa		11.47	□□□□□ -0.57
FOXP1-222	ENST00000615603	LSM4	Q9Y4Z0	139 aa	Known RBP	11.47	□□□□□ -0.57
FOXP1-222	ENST00000615603	PLN	P26678	52 aa		11.47	□□□□□ -0.57
FOXP1-222	ENST00000615603	S100A7L2	Q5SY68	101 aa		11.47	□□□□□ -0.57
FOXP1-222	ENST00000615603	ZNF815P	A8K554	130 aa		11.47	□□□□□ -0.57
FOXP1-222	ENST00000615603	TDGF1P3	P51864	188 aa		11.47	□□□□□ -0.57
FOXP1-222	ENST00000615603	LYPD1	Q8N2G4	141 aa		11.47	□□□□□ -0.57
FOXP1-222	ENST00000615603	TMEM190	Q8WZ59	177 aa		11.47	□□□□□ -0.57
FOXP1-222	ENST00000615603	CYTL1	Q9NRR1	136 aa		11.47	□□□□□ -0.57
FOXP1-222	ENST00000615603	ZNF524	Q96C55	264 aa		11.47	□□□□□ -0.57
FOXP1-222	ENST00000615603	SLX1A	Q9BQ83	275 aa		11.47	□□□□□ -0.57
FOXP1-222	ENST00000615603	DMRT1	Q9Y5R6	373 aa		11.46	□□□□□ -0.57
FOXP1-222	ENST00000615603	KNCN	A6PVL3	124 aa		11.46	□□□□□ -0.57
FOXP1-222	ENST00000615603	HOXA3	O43365	443 aa	Predicted RBP	11.46	□□□□□ -0.57
FOXP1-222	ENST00000615603		A0A1B0GWB2	263 aa		11.46	□□□□□ -0.58
FOXP1-222	ENST00000615603		F5H768	121 aa		11.46	□□□□□ -0.58
FOXP1-222	ENST00000615603	TSPAN13	O95857	204 aa		11.46	□□□□□ -0.58
FOXP1-222	ENST00000615603	FANCM	Q8IYD8	2048 aa		11.46	□□□□□ -0.58
FOXP1-222	ENST00000615603	IGKC	P01834	107 aa		11.46	□□□□□ -0.58
FOXP1-222	ENST00000615603	DKK1	O94907	266 aa		11.45	□□□□□ -0.58
FOXP1-222	ENST00000615603	GHRH	P01286	108 aa		11.45	□□□□□ -0.58
FOXP1-222	ENST00000615603	CFHR3	Q02985	330 aa		11.45	□□□□□ -0.58
FOXP1-222	ENST00000615603	SRSF4	Q08170	494 aa	Known RBP	11.45	□□□□□ -0.58
FOXP1-222	ENST00000615603	SPINK13	Q1W4C9	94 aa		11.45	□□□□□ -0.58
FOXP1-222	ENST00000615603	JPT2	Q9H910	190 aa		11.45	□□□□□ -0.58
FOXP1-222	ENST00000615603	C17orf58	Q2M2W7	97 aa		11.45	□□□□□ -0.58
FOXP1-222	ENST00000615603	LINC01551	Q86U37	167 aa		11.45	□□□□□ -0.58
FOXP1-222	ENST00000615603	CUL9	Q8IWT3	2517 aa		11.45	□□□□□ -0.58
FOXP1-222	ENST00000615603	TRAV1-1	A0A0B4J248	108 aa		11.45	□□□□□ -0.58
FOXP1-222	ENST00000615603	MORN3	Q6PF18	240 aa	Predicted RBP	11.45	□□□□□ -0.58
FOXP1-222	ENST00000615603	CST9L	Q9H4G1	147 aa		11.45	□□□□□ -0.58
FOXP1-222	ENST00000615603	MGAM	O43451	1857 aa		11.45	□□□□□ -0.58
FOXP1-222	ENST00000615603	MST1L	Q2TV78	715 aa		11.45	□□□□□ -0.58
FOXP1-222	ENST00000615603	TCTEX1D4	Q5JR98	221 aa		11.45	□□□□□ -0.58
FOXP1-222	ENST00000615603	PLXNA3	P51805	1871 aa		11.45	□□□□□ -0.58
FOXP1-222	ENST00000615603	VCY	O14598	125 aa		11.45	□□□□□ -0.58
FOXP1-222	ENST00000615603	TEX43	Q6ZNM6	134 aa		11.45	□□□□□ -0.58
FOXP1-222	ENST00000615603	TP53BP1	Q12888	1972 aa	Predicted RBP	11.44	□□□□□ -0.58
FOXP1-222	ENST00000615603	DAD1	P61803	113 aa		11.44	□□□□□ -0.58
FOXP1-222	ENST00000615603	TEX36	Q5VZQ5	186 aa		11.44	□□□□□ -0.58
FOXP1-222	ENST00000615603	NHP2	Q9NX24	153 aa	Known RBP	11.44	□□□□□ -0.58
FOXP1-222	ENST00000615603	TRAV13-1	A0A0B4J241	112 aa		11.44	□□□□□ -0.58
FOXP1-222	ENST00000615603	PAX2	Q02962	417 aa		11.44	□□□□□ -0.58
FOXP1-222	ENST00000615603	LINC01549	A6NIU2	74 aa		11.44	□□□□□ -0.58
FOXP1-222	ENST00000615603	ZNF833P	Q6ZTB9	187 aa		11.44	□□□□□ -0.58
FOXP1-222	ENST00000615603	CSTL1	Q9H114	145 aa		11.44	□□□□□ -0.58
FOXP1-222	ENST00000615603	YLPM1	P49750	1951 aa	Known RBP	11.44	□□□□□ -0.58
FOXP1-222	ENST00000615603	DOCK9	Q9BZ29	2069 aa		11.44	□□□□□ -0.58
FOXP1-222	ENST00000615603	CHCHD1	Q96BP2	118 aa	Known RBP	11.43	□□□□□ -0.58
FOXP1-222	ENST00000615603	C6orf226	Q5I0X4	101 aa		11.43	□□□□□ -0.58
FOXP1-222	ENST00000615603	TTC32	Q5I0X7	151 aa		11.43	□□□□□ -0.58
FOXP1-222	ENST00000615603	IGHV4-39	P01824	125 aa		11.43	□□□□□ -0.58
FOXP1-222	ENST00000615603	ARMS2	P0C7Q2	107 aa		11.43	□□□□□ -0.58
FOXP1-222	ENST00000615603	NPC2	P61916	151 aa		11.43	□□□□□ -0.58
FOXP1-222	ENST00000615603	NDUFA4L2	Q9NRX3	87 aa		11.43	□□□□□ -0.58
FOXP1-222	ENST00000615603	PAX4	O43316	350 aa		11.43	□□□□□ -0.58
FOXP1-222	ENST00000615603	MMP23A	O75900	390 aa		11.43	□□□□□ -0.58
FOXP1-222	ENST00000615603	LINC00518	Q8N0U6	118 aa		11.43	□□□□□ -0.58
FOXP1-222	ENST00000615603	ZGRF1	Q86YA3	2104 aa		11.43	□□□□□ -0.58
FOXP1-222	ENST00000615603	YPEL3	P61236	119 aa	Predicted RBP	11.42	□□□□□ -0.58
FOXP1-222	ENST00000615603	LINC00479	Q96M42	142 aa		11.42	□□□□□ -0.58
FOXP1-222	ENST00000615603	KLK9	Q9UKQ9	250 aa		11.42	□□□□□ -0.58
FOXP1-222	ENST00000615603	GTF3C1	Q12789	2109 aa		11.42	□□□□□ -0.58
FOXP1-222	ENST00000615603		E9PQ18	207 aa		11.42	□□□□□ -0.58
FOXP1-222	ENST00000615603	TMEM14B	Q9NUH8	114 aa		11.42	□□□□□ -0.58
FOXP1-222	ENST00000615603	SPG11	Q96JI7	2443 aa		11.42	□□□□□ -0.58
FOXP1-222	ENST00000615603	PDE6H	Q13956	83 aa		11.42	□□□□□ -0.58
FOXP1-222	ENST00000615603	SPCS1	Q9Y6A9	102 aa		11.42	□□□□□ -0.58
FOXP1-222	ENST00000615603	SHISA9	B4DS77	424 aa		11.41	□□□□□ -0.58
FOXP1-222	ENST00000615603	FAM120AOS	Q5T036	256 aa		11.41	□□□□□ -0.58
FOXP1-222	ENST00000615603	MALRD1	Q5VYJ5	2156 aa		11.41	□□□□□ -0.58
FOXP1-222	ENST00000615603	SI	P14410	1827 aa		11.41	□□□□□ -0.58
FOXP1-222	ENST00000615603	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	11.41	□□□□□ -0.58
FOXP1-222	ENST00000615603	DIAPH2-AS1	Q14236	149 aa		11.41	□□□□□ -0.58
FOXP1-222	ENST00000615603		Q86TA4	180 aa		11.41	□□□□□ -0.58
FOXP1-222	ENST00000615603	DMRTC2	Q8IXT2	367 aa	Predicted RBP	11.41	□□□□□ -0.58
FOXP1-222	ENST00000615603	NUP35	Q8NFH5	326 aa		11.41	□□□□□ -0.58
FOXP1-222	ENST00000615603	MCRIP2	Q9BUT9	160 aa	Known RBP	11.41	□□□□□ -0.58
FOXP1-222	ENST00000615603	NCOR1P1	Q9H4R4	102 aa		11.41	□□□□□ -0.58
FOXP1-222	ENST00000615603	TPSG1	Q9NRR2	321 aa		11.41	□□□□□ -0.58
FOXP1-222	ENST00000615603	FNDC10	F2Z333	226 aa		11.41	□□□□□ -0.58
FOXP1-222	ENST00000615603	HIST1H2BK	O60814	126 aa		11.41	□□□□□ -0.58
FOXP1-222	ENST00000615603	HIST1H2BJ	P06899	126 aa		11.41	□□□□□ -0.58
FOXP1-222	ENST00000615603	HIST1H2BO	P23527	126 aa		11.41	□□□□□ -0.58
FOXP1-222	ENST00000615603	HIST1H2BB	P33778	126 aa		11.41	□□□□□ -0.58
FOXP1-222	ENST00000615603	HIST1H2BD	P58876	126 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms