RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 PEF1Q9UBV8 284 aaKnown RBP10.03□□□□□ -0.8
MSH6-213ENST00000614496 TLN1Q9Y490 2541 aaKnown RBP10.03□□□□□ -0.8
MSH6-213ENST00000614496 TMEM213A2RRL7 107 aa10.03□□□□□ -0.8
MSH6-213ENST00000614496 CCL25O15444 150 aa10.03□□□□□ -0.8
MSH6-213ENST00000614496 NBR2O15453 112 aa10.03□□□□□ -0.8
MSH6-213ENST00000614496 TMEM155Q4W5P6 130 aa10.03□□□□□ -0.8
MSH6-213ENST00000614496 TMEM97Q5BJF2 176 aa10.03□□□□□ -0.8
MSH6-213ENST00000614496 NUP37Q8NFH4 326 aa10.03□□□□□ -0.8
MSH6-213ENST00000614496 PPP1R14DQ9NXH3 145 aa10.03□□□□□ -0.8
MSH6-213ENST00000614496 RABAC1Q9UI14 185 aa10.03□□□□□ -0.8
MSH6-213ENST00000614496 IGLC7A0M8Q6 106 aa10.03□□□□□ -0.8
MSH6-213ENST00000614496 E7EQL1 145 aa10.03□□□□□ -0.8
MSH6-213ENST00000614496 BUB1B-PAK6H3BSN5 160 aa10.03□□□□□ -0.8
MSH6-213ENST00000614496 SFTPCP11686 197 aa10.03□□□□□ -0.8
MSH6-213ENST00000614496 EVI2AP22794 236 aa10.03□□□□□ -0.8
MSH6-213ENST00000614496 GUSBP1Q15486 140 aa10.03□□□□□ -0.8
MSH6-213ENST00000614496 SPANXN1Q5VSR9 72 aa10.03□□□□□ -0.8
MSH6-213ENST00000614496 MAP1LC3AQ9H492 121 aa10.03□□□□□ -0.8
MSH6-213ENST00000614496 PRR30Q53SZ7 412 aaPredicted RBP10.02□□□□□ -0.81
MSH6-213ENST00000614496 Q5PR19 223 aa10.02□□□□□ -0.81
MSH6-213ENST00000614496 LINC00322Q6ZN03 302 aaPredicted RBP10.02□□□□□ -0.81
MSH6-213ENST00000614496 FER1L6-AS1Q8NA97 138 aa10.02□□□□□ -0.81
MSH6-213ENST00000614496 C8orf49Q96NF6 230 aa10.02□□□□□ -0.81
MSH6-213ENST00000614496 WDFY4Q6ZS81 3184 aa10.02□□□□□ -0.81
MSH6-213ENST00000614496 LOC105371242A0A075B767 164 aa10.02□□□□□ -0.81
MSH6-213ENST00000614496 GTSF1Q8WW33 167 aa10.02□□□□□ -0.81
MSH6-213ENST00000614496 THAP8Q8NA92 274 aa10.01□□□□□ -0.81
MSH6-213ENST00000614496 TRAV30A0A087WSZ9 112 aa10.01□□□□□ -0.81
MSH6-213ENST00000614496 GOSR1O95249 250 aa10.01□□□□□ -0.81
MSH6-213ENST00000614496 ZC2HC1AQ96GY0 325 aa10.01□□□□□ -0.81
MSH6-213ENST00000614496 PSG9Q00887 426 aa10.01□□□□□ -0.81
MSH6-213ENST00000614496 HIST1H1AQ02539 215 aaPredicted RBP10.01□□□□□ -0.81
MSH6-213ENST00000614496 SAPCD1Q5SSQ6 148 aa10.01□□□□□ -0.81
MSH6-213ENST00000614496 ARPC1AQ92747 370 aa10□□□□□ -0.81
MSH6-213ENST00000614496 TMEM160Q9NX00 188 aa10□□□□□ -0.81
MSH6-213ENST00000614496 IGKV1D-37A0A075B6S9 117 aa10□□□□□ -0.81
MSH6-213ENST00000614496 IGLC1P0CG04 106 aa10□□□□□ -0.81
MSH6-213ENST00000614496 CEACAM8P31997 349 aaPredicted RBP10□□□□□ -0.81
MSH6-213ENST00000614496 PVRIGQ6DKI7 326 aa10□□□□□ -0.81
MSH6-213ENST00000614496 WIPF2Q8TF74 440 aaPredicted RBP10□□□□□ -0.81
MSH6-213ENST00000614496 COL25A1Q9BXS0 654 aaPredicted RBP10□□□□□ -0.81
MSH6-213ENST00000614496 TRAV8-6A0A0B4J262 113 aa10□□□□□ -0.81
MSH6-213ENST00000614496 PSG3Q16557 428 aa10□□□□□ -0.81
MSH6-213ENST00000614496 CCDC144NLQ6NUI1 221 aa10□□□□□ -0.81
MSH6-213ENST00000614496 PRSS33Q8NF86 280 aa10□□□□□ -0.81
MSH6-213ENST00000614496 MYOZ3Q8TDC0 251 aa10□□□□□ -0.81
MSH6-213ENST00000614496 C1RLQ9NZP8 487 aa10□□□□□ -0.81
MSH6-213ENST00000614496 IGHV3OR16-10A0A075B7F0 116 aa9.99□□□□□ -0.81
MSH6-213ENST00000614496 ZNF672Q499Z4 452 aaPredicted RBP9.99□□□□□ -0.81
MSH6-213ENST00000614496 TMEM78Q5T7P6 136 aa9.99□□□□□ -0.81
MSH6-213ENST00000614496 IGFL2Q6UWQ7 119 aa9.99□□□□□ -0.81
MSH6-213ENST00000614496 IFI27L1Q96BM0 104 aa9.99□□□□□ -0.81
MSH6-213ENST00000614496 ZNF492Q9P255 531 aa9.99□□□□□ -0.81
MSH6-213ENST00000614496 MGPP08493 103 aa9.99□□□□□ -0.81
MSH6-213ENST00000614496 ARHGAP32A7KAX9 2087 aa9.99□□□□□ -0.81
MSH6-213ENST00000614496 SH2D1AO60880 128 aa9.99□□□□□ -0.81
MSH6-213ENST00000614496 HBDP02042 147 aa9.99□□□□□ -0.81
MSH6-213ENST00000614496 RNASE8Q8TDE3 154 aaKnown RBP9.99□□□□□ -0.81
MSH6-213ENST00000614496 FOXC2Q99958 501 aa9.99□□□□□ -0.81
MSH6-213ENST00000614496 FRYQ5TBA9 3013 aa9.98□□□□□ -0.81
MSH6-213ENST00000614496 KLF5Q13887 457 aaPredicted RBP9.98□□□□□ -0.81
MSH6-213ENST00000614496 Q6AWC8 147 aa9.98□□□□□ -0.81
MSH6-213ENST00000614496 TRBV19A0A075B6N1 114 aa9.98□□□□□ -0.81
MSH6-213ENST00000614496 LTAP01374 205 aa9.98□□□□□ -0.81
MSH6-213ENST00000614496 LEPP41159 167 aa9.98□□□□□ -0.81
MSH6-213ENST00000614496 SHANK2-AS3Q9BTD1 123 aa9.98□□□□□ -0.81
MSH6-213ENST00000614496 UBTD1Q9HAC8 227 aa9.98□□□□□ -0.81
MSH6-213ENST00000614496 FABP2P12104 132 aa9.97□□□□□ -0.81
MSH6-213ENST00000614496 GP9P14770 177 aa9.97□□□□□ -0.81
MSH6-213ENST00000614496 PAX1P15863 534 aa9.97□□□□□ -0.81
MSH6-213ENST00000614496 MS4A6AQ9H2W1 248 aa9.97□□□□□ -0.81
MSH6-213ENST00000614496 NBEAQ8NFP9 2946 aa9.97□□□□□ -0.81
MSH6-213ENST00000614496 IGLV2-23P01705 113 aa9.97□□□□□ -0.81
MSH6-213ENST00000614496 PLP1P60201 277 aa9.97□□□□□ -0.81
MSH6-213ENST00000614496 CT83Q5H943 113 aa9.97□□□□□ -0.81
MSH6-213ENST00000614496 TNFRSF14Q92956 283 aa9.97□□□□□ -0.81
MSH6-213ENST00000614496 C2orf70A6NJV1 201 aa9.97□□□□□ -0.81
MSH6-213ENST00000614496 RPS20P60866 119 aaKnown RBP9.97□□□□□ -0.81
MSH6-213ENST00000614496 CLEC19AQ6UXS0 136 aa9.97□□□□□ -0.81
MSH6-213ENST00000614496 LINC00311Q8N616 119 aa9.97□□□□□ -0.81
MSH6-213ENST00000614496 C16orf92Q96LL3 132 aa9.97□□□□□ -0.81
MSH6-213ENST00000614496 GFRA4Q9GZZ7 299 aa9.97□□□□□ -0.81
MSH6-213ENST00000614496 A0A1B0GW15 77 aa9.96□□□□□ -0.81
MSH6-213ENST00000614496 F5H697 171 aa9.96□□□□□ -0.81
MSH6-213ENST00000614496 CTRLP40313 264 aa9.96□□□□□ -0.81
MSH6-213ENST00000614496 RIPPLY3P57055 190 aa9.96□□□□□ -0.81
MSH6-213ENST00000614496 FAM71F2Q6NXP2 309 aa9.96□□□□□ -0.81
MSH6-213ENST00000614496 PRSS57Q6UWY2 283 aa9.96□□□□□ -0.81
MSH6-213ENST00000614496 CEP295Q9C0D2 2601 aa9.96□□□□□ -0.81
MSH6-213ENST00000614496 FAM120AOSQ5T036 256 aa9.96□□□□□ -0.81
MSH6-213ENST00000614496 BVES-AS1Q5T3Y7 98 aa9.96□□□□□ -0.82
MSH6-213ENST00000614496 PRO3102Q9H379 93 aa9.96□□□□□ -0.82
MSH6-213ENST00000614496 LINC00527Q9UJ94 153 aa9.96□□□□□ -0.82
MSH6-213ENST00000614496 NDUFB8O95169 186 aa9.96□□□□□ -0.82
MSH6-213ENST00000614496 FAM106CPP0CH98 169 aa9.96□□□□□ -0.82
MSH6-213ENST00000614496 TMEM75Q8N9X5 138 aa9.96□□□□□ -0.82
MSH6-213ENST00000614496 SMIM12Q96EX1 92 aa9.96□□□□□ -0.82
MSH6-213ENST00000614496 SPCS1Q9Y6A9 102 aa9.96□□□□□ -0.82
MSH6-213ENST00000614496 ATRXP46100 2492 aa9.96□□□□□ -0.82
MSH6-213ENST00000614496 FABP5P3A8MUU1 101 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms