RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 SERF1AO75920 110 aa21.8■■□□□ 1.08
CSPG5-205ENST00000610462 CLEC3BP05452 202 aa21.8■■□□□ 1.08
CSPG5-205ENST00000610462 ZNF664Q8N3J9 261 aa21.8■■□□□ 1.08
CSPG5-205ENST00000610462 TOMM20LQ6UXN7 152 aa21.79■■□□□ 1.08
CSPG5-205ENST00000610462 TCF24Q7RTU0 167 aa21.79■■□□□ 1.08
CSPG5-205ENST00000610462 EEF1AKMT3Q96AZ1 226 aa21.79■■□□□ 1.08
CSPG5-205ENST00000610462 GNB4Q9HAV0 340 aa21.79■■□□□ 1.08
CSPG5-205ENST00000610462 ZMAT5Q9UDW3 170 aaKnown RBP21.79■■□□□ 1.08
CSPG5-205ENST00000610462 M0R3E3 92 aa21.79■■□□□ 1.08
CSPG5-205ENST00000610462 DSCR9P59020 149 aa21.79■■□□□ 1.08
CSPG5-205ENST00000610462 IQCJQ1A5X6 159 aa21.79■■□□□ 1.08
CSPG5-205ENST00000610462 OR10J3Q5JRS4 329 aa21.79■■□□□ 1.08
CSPG5-205ENST00000610462 OR4B1Q8NGF8 309 aa21.79■■□□□ 1.08
CSPG5-205ENST00000610462 CCDC140Q96MF4 163 aa21.79■■□□□ 1.08
CSPG5-205ENST00000610462 GFRA4Q9GZZ7 299 aa21.79■■□□□ 1.08
CSPG5-205ENST00000610462 CSMD1Q96PZ7 3565 aa21.78■■□□□ 1.08
CSPG5-205ENST00000610462 CACNA1BQ00975 2339 aa21.78■■□□□ 1.08
CSPG5-205ENST00000610462 CRIP2P52943 208 aaPredicted RBP21.78■■□□□ 1.08
CSPG5-205ENST00000610462 PAFAH1B2P68402 229 aa21.78■■□□□ 1.08
CSPG5-205ENST00000610462 ZFAND3Q9H8U3 227 aa21.78■■□□□ 1.08
CSPG5-205ENST00000610462 F2Z2F3 143 aa21.78■■□□□ 1.08
CSPG5-205ENST00000610462 COL8A1P27658 744 aa21.78■■□□□ 1.08
CSPG5-205ENST00000610462 C19orf54Q5BKX5 351 aa21.78■■□□□ 1.08
CSPG5-205ENST00000610462 GDF5OSQ5U4N7 250 aa21.78■■□□□ 1.08
CSPG5-205ENST00000610462 Q71RC1 249 aaPredicted RBP21.78■■□□□ 1.08
CSPG5-205ENST00000610462 NOL4LQ96MY1 436 aaPredicted RBP21.78■■□□□ 1.08
CSPG5-205ENST00000610462 MS4A10Q96PG2 267 aa21.78■■□□□ 1.08
CSPG5-205ENST00000610462 BBC3Q96PG8 261 aaPredicted RBP21.78■■□□□ 1.08
CSPG5-205ENST00000610462 TRBV7-1A0A0A6YYK4 115 aa21.77■■□□□ 1.08
CSPG5-205ENST00000610462 IGHV3-35A0A0C4DH35 117 aa21.77■■□□□ 1.08
CSPG5-205ENST00000610462 A0A1B0GXF2 115 aa21.77■■□□□ 1.08
CSPG5-205ENST00000610462 TPPP2P59282 170 aa21.77■■□□□ 1.08
CSPG5-205ENST00000610462 CLEC19AQ6UXS0 136 aa21.77■■□□□ 1.08
CSPG5-205ENST00000610462 GTSF1Q8WW33 167 aa21.77■■□□□ 1.08
CSPG5-205ENST00000610462 TRAV41A0A0B4J266 112 aa21.76■■□□□ 1.07
CSPG5-205ENST00000610462 SERTM2A0A1B0GWG4 89 aa21.76■■□□□ 1.07
CSPG5-205ENST00000610462 CSN1S1P47710 185 aa21.76■■□□□ 1.07
CSPG5-205ENST00000610462 SLAQ13239 276 aa21.76■■□□□ 1.07
CSPG5-205ENST00000610462 C16orf54Q6UWD8 224 aa21.76■■□□□ 1.07
CSPG5-205ENST00000610462 ARL6IP6Q8N6S5 226 aa21.76■■□□□ 1.07
CSPG5-205ENST00000610462 ZC2HC1AQ96GY0 325 aa21.76■■□□□ 1.07
CSPG5-205ENST00000610462 SMAD5-AS1Q9Y6J3 95 aa21.76■■□□□ 1.07
CSPG5-205ENST00000610462 USP9XQ93008 2570 aaPredicted RBP21.76■■□□□ 1.07
CSPG5-205ENST00000610462 FAM231BA6NCW3 169 aa21.76■■□□□ 1.07
CSPG5-205ENST00000610462 SRIP30626 198 aa21.76■■□□□ 1.07
CSPG5-205ENST00000610462 NRGNQ92686 78 aa21.76■■□□□ 1.07
CSPG5-205ENST00000610462 COL12A1Q99715 3063 aa21.75■■□□□ 1.07
CSPG5-205ENST00000610462 FLNCQ14315 2725 aa21.75■■□□□ 1.07
CSPG5-205ENST00000610462 ZNF785A8K8V0 405 aa21.75■■□□□ 1.07
CSPG5-205ENST00000610462 SOX21Q9Y651 276 aaPredicted RBP21.75■■□□□ 1.07
CSPG5-205ENST00000610462 IGHV3OR16-8A0A075B7F1 116 aa21.75■■□□□ 1.07
CSPG5-205ENST00000610462 A8MWP6 167 aa21.75■■□□□ 1.07
CSPG5-205ENST00000610462 ZNF253O75346 499 aa21.75■■□□□ 1.07
CSPG5-205ENST00000610462 B4DSR2 109 aa21.74■■□□□ 1.07
CSPG5-205ENST00000610462 RAB9AP51151 201 aa21.73■■□□□ 1.07
CSPG5-205ENST00000610462 ATP5G2Q06055 141 aa21.73■■□□□ 1.07
CSPG5-205ENST00000610462 RBPMS2Q6ZRY4 209 aaKnown RBP21.73■■□□□ 1.07
CSPG5-205ENST00000610462 CAMPP49913 170 aa21.73■■□□□ 1.07
CSPG5-205ENST00000610462 OR2D3Q8NGH3 330 aa21.73■■□□□ 1.07
CSPG5-205ENST00000610462 PGLYRP4Q96LB8 373 aa21.73■■□□□ 1.07
CSPG5-205ENST00000610462 HIF1ANQ9NWT6 349 aa21.73■■□□□ 1.07
CSPG5-205ENST00000610462 USP24Q9UPU5 2620 aa21.72■■□□□ 1.07
CSPG5-205ENST00000610462 SCGB1D1O95968 90 aa21.72■■□□□ 1.07
CSPG5-205ENST00000610462 PRB4P10163 310 aaPredicted RBP21.72■■□□□ 1.07
CSPG5-205ENST00000610462 HBBP68871 147 aa21.72■■□□□ 1.07
CSPG5-205ENST00000610462 A6NDX4 124 aa21.71■■□□□ 1.07
CSPG5-205ENST00000610462 ATP6V0BQ99437 205 aa21.71■■□□□ 1.07
CSPG5-205ENST00000610462 ASCL2Q99929 193 aa21.71■■□□□ 1.07
CSPG5-205ENST00000610462 FAM223BA6NKX1 122 aa21.71■■□□□ 1.07
CSPG5-205ENST00000610462 H3BUX3 64 aa21.71■■□□□ 1.07
CSPG5-205ENST00000610462 SLC25A16P16260 332 aa21.71■■□□□ 1.07
CSPG5-205ENST00000610462 LY6EQ16553 131 aa21.71■■□□□ 1.07
CSPG5-205ENST00000610462 FAM223AQ8IWN6 122 aa21.71■■□□□ 1.07
CSPG5-205ENST00000610462 BUB3O43684 328 aa21.7■■□□□ 1.06
CSPG5-205ENST00000610462 ZNF843Q8N446 348 aa21.7■■□□□ 1.06
CSPG5-205ENST00000610462 LINC00469Q8N7U9 141 aa21.7■■□□□ 1.06
CSPG5-205ENST00000610462 LINC00527Q9UJ94 153 aa21.7■■□□□ 1.06
CSPG5-205ENST00000610462 CLPSL1A2RUU4 121 aa21.7■■□□□ 1.06
CSPG5-205ENST00000610462 COX6B1P14854 86 aa21.7■■□□□ 1.06
CSPG5-205ENST00000610462 NAGKQ9UJ70 344 aa21.7■■□□□ 1.06
CSPG5-205ENST00000610462 IGF1P05019 195 aa21.69■■□□□ 1.06
CSPG5-205ENST00000610462 RELQ04864 619 aaPredicted RBP21.69■■□□□ 1.06
CSPG5-205ENST00000610462 A0A087X0K7 114 aa21.68■■□□□ 1.06
CSPG5-205ENST00000610462 GATA3P23771 443 aa21.68■■□□□ 1.06
CSPG5-205ENST00000610462 SSBP4Q9BWG4 385 aaPredicted RBP21.68■■□□□ 1.06
CSPG5-205ENST00000610462 SAMD10Q9BYL1 202 aa21.68■■□□□ 1.06
CSPG5-205ENST00000610462 SVEP1Q4LDE5 3571 aa21.68■■□□□ 1.06
CSPG5-205ENST00000610462 FBLL1A6NHQ2 334 aaKnown RBP21.68■■□□□ 1.06
CSPG5-205ENST00000610462 CHEK1O14757 476 aa21.68■■□□□ 1.06
CSPG5-205ENST00000610462 CRIP1P50238 77 aa21.68■■□□□ 1.06
CSPG5-205ENST00000610462 FOXA3P55318 350 aaPredicted RBP21.68■■□□□ 1.06
CSPG5-205ENST00000610462 C8orf49Q96NF6 230 aa21.68■■□□□ 1.06
CSPG5-205ENST00000610462 RCHY1Q96PM5 261 aa21.68■■□□□ 1.06
CSPG5-205ENST00000610462 NDUFAF3Q9BU61 184 aa21.68■■□□□ 1.06
CSPG5-205ENST00000610462 C18orf32Q8TCD1 76 aa21.67■■□□□ 1.06
CSPG5-205ENST00000610462 KCNS1Q96KK3 526 aa21.67■■□□□ 1.06
CSPG5-205ENST00000610462 IGKV2-40A0A087WW87 121 aaPredicted RBP21.67■■□□□ 1.06
CSPG5-205ENST00000610462 AVPP01185 164 aa21.67■■□□□ 1.06
CSPG5-205ENST00000610462 IGKV2D-40P01614 121 aaPredicted RBP21.67■■□□□ 1.06
CSPG5-205ENST00000610462 IGHG2P01859 326 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms