RNA–Protein interactions for RNA: ENST00000608623.1

LINC01278-202, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

Gene LINC01278, Length 5,053 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-202ENST00000608623 CADM3Q8N126 398 aa2.85□□□□□ -1.95
LINC01278-202ENST00000608623 EIF4E3Q8N5X7 224 aaKnown RBP2.85□□□□□ -1.95
LINC01278-202ENST00000608623 SMIM4Q8WVI0 70 aa2.85□□□□□ -1.95
LINC01278-202ENST00000608623 SAMD10Q9BYL1 202 aa2.85□□□□□ -1.95
LINC01278-202ENST00000608623 HEATR5AQ86XA9 2040 aa2.85□□□□□ -1.95
LINC01278-202ENST00000608623 GCN1Q92616 2671 aaKnown RBP2.85□□□□□ -1.95
LINC01278-202ENST00000608623 KMT2EQ8IZD2 1858 aa2.85□□□□□ -1.95
LINC01278-202ENST00000608623 ZNF727A8MUV8 499 aa2.85□□□□□ -1.95
LINC01278-202ENST00000608623 FAM90A26D6RGX4 464 aa2.85□□□□□ -1.95
LINC01278-202ENST00000608623 TCL1AP56279 114 aa2.85□□□□□ -1.95
LINC01278-202ENST00000608623 FAM222AQ5U5X8 452 aa2.85□□□□□ -1.95
LINC01278-202ENST00000608623 TM2D1Q9BX74 207 aa2.85□□□□□ -1.95
LINC01278-202ENST00000608623 FLVCR2Q9UPI3 526 aa2.85□□□□□ -1.95
LINC01278-202ENST00000608623 WI2-2373I1.2A0A1W2PRP0 233 aa2.85□□□□□ -1.95
LINC01278-202ENST00000608623 UBE2D1P51668 147 aa2.85□□□□□ -1.95
LINC01278-202ENST00000608623 FGF8P55075 233 aaPredicted RBP2.85□□□□□ -1.95
LINC01278-202ENST00000608623 LINC00205P59089 165 aa2.85□□□□□ -1.95
LINC01278-202ENST00000608623 ZNF833PQ6ZTB9 187 aa2.85□□□□□ -1.95
LINC01278-202ENST00000608623 ALKBH7Q9BT30 221 aaPredicted RBP2.85□□□□□ -1.95
LINC01278-202ENST00000608623 ANKRD20A5PA0PJZ0 165 aa2.85□□□□□ -1.95
LINC01278-202ENST00000608623 PMS2P5A8MQ11 134 aa2.85□□□□□ -1.95
LINC01278-202ENST00000608623 HLA-DQB1P01920 261 aa2.85□□□□□ -1.95
LINC01278-202ENST00000608623 PRSS1P07477 247 aa2.85□□□□□ -1.95
LINC01278-202ENST00000608623 CSN3P07498 182 aa2.85□□□□□ -1.95
LINC01278-202ENST00000608623 ADMP35318 185 aa2.85□□□□□ -1.95
LINC01278-202ENST00000608623 RAB32Q13637 225 aa2.85□□□□□ -1.95
LINC01278-202ENST00000608623 ZNF876PQ49A33 203 aa2.85□□□□□ -1.95
LINC01278-202ENST00000608623 CLPSL2Q6UWE3 100 aa2.85□□□□□ -1.95
LINC01278-202ENST00000608623 C5orf24Q7Z6I8 188 aa2.85□□□□□ -1.95
LINC01278-202ENST00000608623 OR13C6PQ8NH95 151 aa2.85□□□□□ -1.95
LINC01278-202ENST00000608623 TMEM190Q8WZ59 177 aa2.85□□□□□ -1.95
LINC01278-202ENST00000608623 SMIM7Q9BQ49 75 aa2.85□□□□□ -1.95
LINC01278-202ENST00000608623 C2orf88Q9BSF0 95 aa2.85□□□□□ -1.95
LINC01278-202ENST00000608623 NXF2Q9GZY0 626 aaKnown RBP2.85□□□□□ -1.95
LINC01278-202ENST00000608623 NCOR1P1Q9H4R4 102 aa2.85□□□□□ -1.95
LINC01278-202ENST00000608623 NXT2Q9NPJ8 142 aaKnown RBP2.85□□□□□ -1.95
LINC01278-202ENST00000608623 PTPRDP23468 1912 aa2.85□□□□□ -1.95
LINC01278-202ENST00000608623 TRBV5-7A0A0A0MS05 114 aa2.84□□□□□ -1.95
LINC01278-202ENST00000608623 RPL35P42766 123 aaKnown RBP2.84□□□□□ -1.95
LINC01278-202ENST00000608623 RHOHQ15669 191 aa2.84□□□□□ -1.95
LINC01278-202ENST00000608623 Q1RN00 199 aa2.84□□□□□ -1.95
LINC01278-202ENST00000608623 PAPPA-AS1Q5QFB9 102 aa2.84□□□□□ -1.95
LINC01278-202ENST00000608623 ARTNQ5T4W7 220 aa2.84□□□□□ -1.95
LINC01278-202ENST00000608623 C18orf65Q6ZTR6 163 aa2.84□□□□□ -1.95
LINC01278-202ENST00000608623 BAP18Q8IXM2 172 aa2.84□□□□□ -1.95
LINC01278-202ENST00000608623 SELENOHQ8IZQ5 122 aaKnown RBP2.84□□□□□ -1.95
LINC01278-202ENST00000608623 OR8A1Q8NGG7 326 aa2.84□□□□□ -1.95
LINC01278-202ENST00000608623 AP1S3Q96PC3 154 aa2.84□□□□□ -1.95
LINC01278-202ENST00000608623 MRPL32Q9BYC8 188 aaKnown RBP2.84□□□□□ -1.95
LINC01278-202ENST00000608623 MRPL16Q9NX20 251 aaKnown RBP2.84□□□□□ -1.95
LINC01278-202ENST00000608623 OR5AC2Q9NZP5 309 aa2.84□□□□□ -1.95
LINC01278-202ENST00000608623 C9orf170A2RU37 121 aa2.84□□□□□ -1.95
LINC01278-202ENST00000608623 APCSP02743 223 aa2.84□□□□□ -1.95
LINC01278-202ENST00000608623 CRYGDP07320 174 aa2.84□□□□□ -1.95
LINC01278-202ENST00000608623 CACNG7P62955 275 aa2.84□□□□□ -1.95
LINC01278-202ENST00000608623 DEFB114Q30KQ6 69 aa2.84□□□□□ -1.95
LINC01278-202ENST00000608623 NHLRC3Q5JS37 347 aa2.84□□□□□ -1.95
LINC01278-202ENST00000608623 OR5A1Q8NGJ0 315 aa2.84□□□□□ -1.95
LINC01278-202ENST00000608623 RAB24Q969Q5 203 aa2.84□□□□□ -1.95
LINC01278-202ENST00000608623 TMPRSS5Q9H3S3 457 aa2.84□□□□□ -1.95
LINC01278-202ENST00000608623 COX11Q9Y6N1 276 aa2.84□□□□□ -1.95
LINC01278-202ENST00000608623 TRAV26-1A0A087WT03 109 aa2.84□□□□□ -1.95
LINC01278-202ENST00000608623 MUC21A0A0G2JKD1 596 aa2.84□□□□□ -1.95
LINC01278-202ENST00000608623 MUC21A0A140T8X8 626 aa2.84□□□□□ -1.95
LINC01278-202ENST00000608623 FABP5P3A8MUU1 101 aa2.84□□□□□ -1.95
LINC01278-202ENST00000608623 F8W036 122 aa2.84□□□□□ -1.95
LINC01278-202ENST00000608623 TMEM50AO95807 157 aa2.84□□□□□ -1.95
LINC01278-202ENST00000608623 IL7P13232 177 aa2.84□□□□□ -1.95
LINC01278-202ENST00000608623 RPS11P62280 158 aaKnown RBP eCLIP2.84□□□□□ -1.95
LINC01278-202ENST00000608623 ISOC2Q96AB3 205 aa2.84□□□□□ -1.95
LINC01278-202ENST00000608623 DUSP21Q9H596 190 aa2.84□□□□□ -1.95
LINC01278-202ENST00000608623 GSN-AS1Q9NRJ2 163 aa2.84□□□□□ -1.95
LINC01278-202ENST00000608623 DYSFO75923 2080 aa2.84□□□□□ -1.95
LINC01278-202ENST00000608623 TRBV25-1A0A075B6N4 114 aa2.84□□□□□ -1.96
LINC01278-202ENST00000608623 TGIF2-C20orf24A0A0A6YYL0 155 aa2.84□□□□□ -1.96
LINC01278-202ENST00000608623 IGKV1D-13A0A0B4J2D9 117 aa2.84□□□□□ -1.96
LINC01278-202ENST00000608623 IGHV4-28A0A0C4DH34 117 aa2.84□□□□□ -1.96
LINC01278-202ENST00000608623 ZNF815PA8K554 130 aa2.84□□□□□ -1.96
LINC01278-202ENST00000608623 SIVA1O15304 175 aa2.84□□□□□ -1.96
LINC01278-202ENST00000608623 TOMM40O96008 361 aa2.84□□□□□ -1.96
LINC01278-202ENST00000608623 IGKV1-13P0DP09 117 aa2.84□□□□□ -1.96
LINC01278-202ENST00000608623 ZNF138P52744 262 aa2.84□□□□□ -1.96
LINC01278-202ENST00000608623 RBMY1FQ15415 496 aaKnown RBP2.84□□□□□ -1.96
LINC01278-202ENST00000608623 SCRT1Q9BWW7 348 aa2.84□□□□□ -1.96
LINC01278-202ENST00000608623 IGHV1OR15-1A0A075B7D0 117 aa2.83□□□□□ -1.96
LINC01278-202ENST00000608623 IGKV2-40A0A087WW87 121 aaPredicted RBP2.83□□□□□ -1.96
LINC01278-202ENST00000608623 IGLV5-52A0A0A0MRZ9 124 aa2.83□□□□□ -1.96
LINC01278-202ENST00000608623 IGKV2-24A0A0C4DH68 120 aa2.83□□□□□ -1.96
LINC01278-202ENST00000608623 hDV102S1A0JD36 115 aa2.83□□□□□ -1.96
LINC01278-202ENST00000608623 C7orf71A4D174 169 aa2.83□□□□□ -1.96
LINC01278-202ENST00000608623 CYSRT1A8MQ03 144 aa2.83□□□□□ -1.96
LINC01278-202ENST00000608623 IGKV1-39P01597 117 aa2.83□□□□□ -1.96
LINC01278-202ENST00000608623 IGKV2D-40P01614 121 aaPredicted RBP2.83□□□□□ -1.96
LINC01278-202ENST00000608623 MT-ND4LP03901 98 aa2.83□□□□□ -1.96
LINC01278-202ENST00000608623 IGKV1D-39P04432 117 aa2.83□□□□□ -1.96
LINC01278-202ENST00000608623 BTF3P20290 206 aaKnown RBP2.83□□□□□ -1.96
LINC01278-202ENST00000608623 M6PRP20645 277 aa2.83□□□□□ -1.96
LINC01278-202ENST00000608623 GCSHP23434 173 aa2.83□□□□□ -1.96
LINC01278-202ENST00000608623 TAGLN2P37802 199 aaKnown RBP2.83□□□□□ -1.96
LINC01278-202ENST00000608623 GAGE6Q13070 117 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms