RNA–Protein interactions for RNA: ENST00000605895.5

RER1-209, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 3,044 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-209ENST00000605895 IGFL4Q6B9Z1 124 aa12.28□□□□□ -0.44
RER1-209ENST00000605895 OR5A1Q8NGJ0 315 aa12.28□□□□□ -0.44
RER1-209ENST00000605895 CKS1BP61024 79 aa12.28□□□□□ -0.44
RER1-209ENST00000605895 NPYP01303 97 aa12.27□□□□□ -0.44
RER1-209ENST00000605895 APOBEC3AP31941 199 aaPredicted RBP12.27□□□□□ -0.44
RER1-209ENST00000605895 RPRMLQ8N4K4 120 aa12.27□□□□□ -0.44
RER1-209ENST00000605895 MSRB1Q9NZV6 116 aa12.27□□□□□ -0.44
RER1-209ENST00000605895 NPIPB6E9PJ23 425 aa12.27□□□□□ -0.45
RER1-209ENST00000605895 IGLV2-11P01706 119 aa12.27□□□□□ -0.45
RER1-209ENST00000605895 KIR2DL2P43627 348 aaPredicted RBP12.27□□□□□ -0.45
RER1-209ENST00000605895 IGHV3OR16-8A0A075B7F1 116 aa12.27□□□□□ -0.45
RER1-209ENST00000605895 NDUFS7O75251 213 aa12.27□□□□□ -0.45
RER1-209ENST00000605895 CKS2P33552 79 aa12.27□□□□□ -0.45
RER1-209ENST00000605895 SLC25A48Q6ZT89 311 aaKnown RBP12.27□□□□□ -0.45
RER1-209ENST00000605895 ATP6V0BQ99437 205 aa12.27□□□□□ -0.45
RER1-209ENST00000605895 SPAG8Q99932 426 aaPredicted RBP12.27□□□□□ -0.45
RER1-209ENST00000605895 C16orf97H3BN30 126 aa12.26□□□□□ -0.45
RER1-209ENST00000605895 GATA1P15976 413 aaPredicted RBP12.26□□□□□ -0.45
RER1-209ENST00000605895 POU2AF1Q16633 256 aa12.26□□□□□ -0.45
RER1-209ENST00000605895 TMEM75Q8N9X5 138 aa12.26□□□□□ -0.45
RER1-209ENST00000605895 VGLL1Q99990 258 aa12.26□□□□□ -0.45
RER1-209ENST00000605895 SOX21Q9Y651 276 aaPredicted RBP12.26□□□□□ -0.45
RER1-209ENST00000605895 A0A1W2PNU3 283 aaPredicted RBP12.26□□□□□ -0.45
RER1-209ENST00000605895 BMI1P35226 326 aa12.26□□□□□ -0.45
RER1-209ENST00000605895 SUB1P53999 127 aaKnown RBP eCLIP12.26□□□□□ -0.455e-8■□□□□ 8.7
RER1-209ENST00000605895 TWIST1Q15672 202 aa12.26□□□□□ -0.45
RER1-209ENST00000605895 CHAC1Q9BUX1 264 aa12.26□□□□□ -0.45
RER1-209ENST00000605895 TMEM160Q9NX00 188 aa12.26□□□□□ -0.45
RER1-209ENST00000605895 OVOL3O00110 214 aa12.25□□□□□ -0.45
RER1-209ENST00000605895 PMS2CLQ68D20 193 aa12.25□□□□□ -0.45
RER1-209ENST00000605895 TMEM133Q9H2Q1 129 aa12.25□□□□□ -0.45
RER1-209ENST00000605895 ZNF492Q9P255 531 aa12.25□□□□□ -0.45
RER1-209ENST00000605895 A0A1B0GV72 72 aa12.25□□□□□ -0.45
RER1-209ENST00000605895 WT1P19544 449 aaPredicted RBP12.25□□□□□ -0.45
RER1-209ENST00000605895 CD300EQ496F6 205 aaPredicted RBP12.25□□□□□ -0.45
RER1-209ENST00000605895 MRPL51Q4U2R6 128 aaKnown RBP12.25□□□□□ -0.45
RER1-209ENST00000605895 OR4X2Q8NGF9 303 aa12.25□□□□□ -0.45
RER1-209ENST00000605895 OR9G4Q8NGQ1 327 aa12.25□□□□□ -0.45
RER1-209ENST00000605895 GAFA1Q96PS6 74 aa12.25□□□□□ -0.45
RER1-209ENST00000605895 HIGD1AQ9Y241 93 aa12.25□□□□□ -0.45
RER1-209ENST00000605895 MALRD1Q5VYJ5 2156 aa12.25□□□□□ -0.45
RER1-209ENST00000605895 HBDP02042 147 aa12.24□□□□□ -0.45
RER1-209ENST00000605895 CT83Q5H943 113 aa12.24□□□□□ -0.45
RER1-209ENST00000605895 Q8TAT8 98 aa12.24□□□□□ -0.45
RER1-209ENST00000605895 GFRA4Q9GZZ7 299 aa12.24□□□□□ -0.45
RER1-209ENST00000605895 MBNL2Q5VZF2 373 aaKnown RBP12.24□□□□□ -0.45
RER1-209ENST00000605895 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.24□□□□□ -0.45
RER1-209ENST00000605895 STXBP6Q8NFX7 210 aa12.24□□□□□ -0.45
RER1-209ENST00000605895 C20orf78Q9BR46 151 aa12.24□□□□□ -0.45
RER1-209ENST00000605895 PSG8Q9UQ74 426 aa12.24□□□□□ -0.45
RER1-209ENST00000605895 NBASA2RRP1 2371 aa12.24□□□□□ -0.45
RER1-209ENST00000605895 K7EQM0 130 aa12.24□□□□□ -0.45
RER1-209ENST00000605895 FTH1P19P0C7X4 201 aa12.24□□□□□ -0.45
RER1-209ENST00000605895 CR1LQ2VPA4 569 aa12.24□□□□□ -0.45
RER1-209ENST00000605895 COL25A1Q9BXS0 654 aaPredicted RBP12.24□□□□□ -0.45
RER1-209ENST00000605895 ASH1LQ9NR48 2969 aaKnown RBP12.23□□□□□ -0.45
RER1-209ENST00000605895 SPTBN1Q01082 2364 aaKnown RBP12.23□□□□□ -0.45
RER1-209ENST00000605895 CRYBA4P53673 196 aa12.23□□□□□ -0.45
RER1-209ENST00000605895 TNFAIP6P98066 277 aaPredicted RBP12.23□□□□□ -0.45
RER1-209ENST00000605895 LGALS9BQ3B8N2 356 aa12.23□□□□□ -0.45
RER1-209ENST00000605895 LGALS9CQ6DKI2 356 aa12.23□□□□□ -0.45
RER1-209ENST00000605895 ORMDL3Q8N138 153 aa12.23□□□□□ -0.45
RER1-209ENST00000605895 FOXC2Q99958 501 aa12.23□□□□□ -0.45
RER1-209ENST00000605895 SLC25A39Q9BZJ4 359 aaPredicted RBP12.23□□□□□ -0.45
RER1-209ENST00000605895 ABCA4P78363 2273 aa12.23□□□□□ -0.45
RER1-209ENST00000605895 LEPP41159 167 aa12.23□□□□□ -0.45
RER1-209ENST00000605895 OSR1Q8TAX0 266 aaPredicted RBP12.23□□□□□ -0.45
RER1-209ENST00000605895 SPANXB1Q9NS25 103 aaPredicted RBP12.23□□□□□ -0.45
RER1-209ENST00000605895 LRBAP50851 2863 aa12.22□□□□□ -0.45
RER1-209ENST00000605895 SRSF6Q13247 344 aaKnown RBP12.22□□□□□ -0.45
RER1-209ENST00000605895 ZC2HC1BQ5TFG8 222 aa12.22□□□□□ -0.45
RER1-209ENST00000605895 RNF7Q9UBF6 113 aa12.22□□□□□ -0.45
RER1-209ENST00000605895 TRBV25-1A0A075B6N4 114 aa12.22□□□□□ -0.45
RER1-209ENST00000605895 TGFAP01135 160 aa12.22□□□□□ -0.45
RER1-209ENST00000605895 CCL11P51671 97 aa12.22□□□□□ -0.45
RER1-209ENST00000605895 OR4C13Q8NGP0 309 aa12.22□□□□□ -0.45
RER1-209ENST00000605895 IGKV2-40A0A087WW87 121 aaPredicted RBP12.21□□□□□ -0.45
RER1-209ENST00000605895 IGHV3-35A0A0C4DH35 117 aa12.21□□□□□ -0.45
RER1-209ENST00000605895 NPIPB5A8MRT5 1133 aa12.21□□□□□ -0.45
RER1-209ENST00000605895 IGKV2D-40P01614 121 aaPredicted RBP12.21□□□□□ -0.45
RER1-209ENST00000605895 KLF17Q5JT82 389 aaPredicted RBP12.21□□□□□ -0.45
RER1-209ENST00000605895 MAPKAPK5-AS1Q8N8E1 139 aa12.21□□□□□ -0.45
RER1-209ENST00000605895 C8orf46Q8TAG6 207 aa12.21□□□□□ -0.45
RER1-209ENST00000605895 DEFB104AQ8WTQ1 72 aa12.21□□□□□ -0.45
RER1-209ENST00000605895 ZNF479Q96JC4 524 aa12.21□□□□□ -0.45
RER1-209ENST00000605895 SRSF8Q9BRL6 282 aaKnown RBP12.21□□□□□ -0.45
RER1-209ENST00000605895 RAI1Q7Z5J4 1906 aaPredicted RBP12.21□□□□□ -0.45
RER1-209ENST00000605895 A0A1B0GWB2 263 aa12.21□□□□□ -0.45
RER1-209ENST00000605895 PRRG2O14669 202 aa12.21□□□□□ -0.45
RER1-209ENST00000605895 THAP8Q8NA92 274 aa12.21□□□□□ -0.45
RER1-209ENST00000605895 MDS2Q8NDY4 140 aa12.21□□□□□ -0.45
RER1-209ENST00000605895 TRAV40A0A0B4J280 105 aa12.21□□□□□ -0.46
RER1-209ENST00000605895 TMEM189A5PLL7 270 aa12.21□□□□□ -0.46
RER1-209ENST00000605895 CT45A10P0DMU9 189 aa12.21□□□□□ -0.46
RER1-209ENST00000605895 SCGB2A2Q13296 93 aa12.21□□□□□ -0.46
RER1-209ENST00000605895 FAM104BQ5XKR9 115 aa12.21□□□□□ -0.46
RER1-209ENST00000605895 C22orf34Q6ZV56 151 aa12.2□□□□□ -0.46
RER1-209ENST00000605895 WI2-2373I1.2A0A1W2PRP0 233 aa12.2□□□□□ -0.46
RER1-209ENST00000605895 SMIM17P0DL12 118 aa12.2□□□□□ -0.46
RER1-209ENST00000605895 OTORQ9NRC9 128 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms