RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 NPYP01303 97 aa9.87□□□□□ -0.83
CDCA3-212ENST00000604599 KIR2DL2P43627 348 aaPredicted RBP9.87□□□□□ -0.83
CDCA3-212ENST00000604599 OR10X1Q8NGY0 326 aa9.87□□□□□ -0.83
CDCA3-212ENST00000604599 TRAV26-1A0A087WT03 109 aa9.86□□□□□ -0.83
CDCA3-212ENST00000604599 C19orf67A6NJJ6 358 aa9.86□□□□□ -0.83
CDCA3-212ENST00000604599 IGLV1-44P01699 117 aa9.86□□□□□ -0.83
CDCA3-212ENST00000604599 INSL3P51460 131 aa9.86□□□□□ -0.83
CDCA3-212ENST00000604599 ATP5G2Q06055 141 aa9.86□□□□□ -0.83
CDCA3-212ENST00000604599 MRPL51Q4U2R6 128 aaKnown RBP9.86□□□□□ -0.83
CDCA3-212ENST00000604599 FAM104BQ5XKR9 115 aa9.86□□□□□ -0.83
CDCA3-212ENST00000604599 RITA1Q96K30 269 aa9.86□□□□□ -0.83
CDCA3-212ENST00000604599 C8orf49Q96NF6 230 aa9.86□□□□□ -0.83
CDCA3-212ENST00000604599 A0A1B0GW15 77 aa9.86□□□□□ -0.83
CDCA3-212ENST00000604599 ATP1A1-AS1Q5TC04 95 aa9.86□□□□□ -0.83
CDCA3-212ENST00000604599 PSG8Q9UQ74 426 aa9.86□□□□□ -0.83
CDCA3-212ENST00000604599 IGHV3-72A0A0B4J1Y9 119 aa9.86□□□□□ -0.83
CDCA3-212ENST00000604599 TMEM238LA0A1B0GVL6 79 aa9.86□□□□□ -0.83
CDCA3-212ENST00000604599 A0A1W2PRD5 423 aa9.86□□□□□ -0.83
CDCA3-212ENST00000604599 A0A1W2PRF3 423 aa9.86□□□□□ -0.83
CDCA3-212ENST00000604599 A0A1W2PRM7 423 aa9.86□□□□□ -0.83
CDCA3-212ENST00000604599 WI2-2373I1.2A0A1W2PRP0 233 aa9.86□□□□□ -0.83
CDCA3-212ENST00000604599 IGLV2-23P01705 113 aa9.86□□□□□ -0.83
CDCA3-212ENST00000604599 PAX8Q06710 450 aa9.86□□□□□ -0.83
CDCA3-212ENST00000604599 SCGB2A2Q13296 93 aa9.86□□□□□ -0.83
CDCA3-212ENST00000604599 FOXI2Q6ZQN5 318 aa9.86□□□□□ -0.83
CDCA3-212ENST00000604599 ZNF493Q6ZR52 646 aa9.86□□□□□ -0.83
CDCA3-212ENST00000604599 C9orf106Q8NAJ2 232 aa9.86□□□□□ -0.83
CDCA3-212ENST00000604599 SPATA25Q9BR10 227 aa9.86□□□□□ -0.83
CDCA3-212ENST00000604599 SLC25A39Q9BZJ4 359 aaPredicted RBP9.86□□□□□ -0.83
CDCA3-212ENST00000604599 RNF7Q9UBF6 113 aa9.86□□□□□ -0.83
CDCA3-212ENST00000604599 SH3BGRL2Q9UJC5 107 aa9.86□□□□□ -0.83
CDCA3-212ENST00000604599 TRBV25-1A0A075B6N4 114 aa9.85□□□□□ -0.83
CDCA3-212ENST00000604599 M0R3E3 92 aa9.85□□□□□ -0.83
CDCA3-212ENST00000604599 CRYGCP07315 174 aa9.85□□□□□ -0.83
CDCA3-212ENST00000604599 HOXB4P17483 251 aaPredicted RBP9.85□□□□□ -0.83
CDCA3-212ENST00000604599 CKS2P33552 79 aa9.85□□□□□ -0.83
CDCA3-212ENST00000604599 GTSCR1Q86UQ5 136 aa9.85□□□□□ -0.83
CDCA3-212ENST00000604599 C16orf97H3BN30 126 aa9.85□□□□□ -0.83
CDCA3-212ENST00000604599 ZNF479Q96JC4 524 aa9.85□□□□□ -0.83
CDCA3-212ENST00000604599 BOD1L1Q8NFC6 3051 aa9.85□□□□□ -0.83
CDCA3-212ENST00000604599 F8W1H4 67 aa9.84□□□□□ -0.83
CDCA3-212ENST00000604599 K7EQM0 130 aa9.84□□□□□ -0.83
CDCA3-212ENST00000604599 Q6AWC8 147 aa9.84□□□□□ -0.83
CDCA3-212ENST00000604599 U3KQK5 164 aa9.84□□□□□ -0.83
CDCA3-212ENST00000604599 PRR33A8MZF0 331 aa9.84□□□□□ -0.83
CDCA3-212ENST00000604599 IGLL5B9A064 214 aa9.84□□□□□ -0.83
CDCA3-212ENST00000604599 M0R1B8 84 aa9.84□□□□□ -0.83
CDCA3-212ENST00000604599 ENSAO43768 121 aaKnown RBP9.84□□□□□ -0.83
CDCA3-212ENST00000604599 CT45A10P0DMU9 189 aa9.84□□□□□ -0.83
CDCA3-212ENST00000604599 SIT1Q9Y3P8 196 aa9.84□□□□□ -0.83
CDCA3-212ENST00000604599 ZDBF2Q9HCK1 2354 aa9.84□□□□□ -0.83
CDCA3-212ENST00000604599 E9PLD3 99 aa9.83□□□□□ -0.84
CDCA3-212ENST00000604599 PRSS1P07477 247 aa9.83□□□□□ -0.84
CDCA3-212ENST00000604599 ZNF562Q6V9R5 426 aa9.83□□□□□ -0.84
CDCA3-212ENST00000604599 CEND1Q8N111 149 aa9.83□□□□□ -0.84
CDCA3-212ENST00000604599 TMEM75Q8N9X5 138 aa9.83□□□□□ -0.84
CDCA3-212ENST00000604599 C1orf162Q8NEQ5 155 aaPredicted RBP9.83□□□□□ -0.84
CDCA3-212ENST00000604599 TMEM133Q9H2Q1 129 aa9.83□□□□□ -0.84
CDCA3-212ENST00000604599 LINC00574Q9H8X3 128 aa9.83□□□□□ -0.84
CDCA3-212ENST00000604599 HIGD1BQ9P298 99 aa9.83□□□□□ -0.84
CDCA3-212ENST00000604599 HHLA3Q9XRX5 114 aa9.83□□□□□ -0.84
CDCA3-212ENST00000604599 TM4SF5O14894 197 aa9.83□□□□□ -0.84
CDCA3-212ENST00000604599 CRYBA4P53673 196 aa9.83□□□□□ -0.84
CDCA3-212ENST00000604599 ODF1Q14990 250 aa9.83□□□□□ -0.84
CDCA3-212ENST00000604599 VMA21Q3ZAQ7 101 aa9.83□□□□□ -0.84
CDCA3-212ENST00000604599 RBP4P02753 201 aa9.83□□□□□ -0.84
CDCA3-212ENST00000604599 TNFAIP6P98066 277 aaPredicted RBP9.83□□□□□ -0.84
CDCA3-212ENST00000604599 ZNF71Q9NQZ8 489 aaPredicted RBP9.83□□□□□ -0.84
CDCA3-212ENST00000604599 LINC00312Q9Y6C7 94 aa9.83□□□□□ -0.84
CDCA3-212ENST00000604599 TRBV19A0A075B6N1 114 aa9.82□□□□□ -0.84
CDCA3-212ENST00000604599 ZC2HC1BQ5TFG8 222 aa9.82□□□□□ -0.84
CDCA3-212ENST00000604599 SPRY4Q9C004 299 aa9.82□□□□□ -0.84
CDCA3-212ENST00000604599 TPRP12270 2363 aaKnown RBP9.82□□□□□ -0.84
CDCA3-212ENST00000604599 ZZEF1O43149 2961 aa9.82□□□□□ -0.84
CDCA3-212ENST00000604599 DMXL2Q8TDJ6 3036 aa9.82□□□□□ -0.84
CDCA3-212ENST00000604599 A0A1W2PNU3 283 aaPredicted RBP9.82□□□□□ -0.84
CDCA3-212ENST00000604599 GAS8-AS1O95177 125 aa9.82□□□□□ -0.84
CDCA3-212ENST00000604599 PPIFP30405 207 aaKnown RBP9.82□□□□□ -0.84
CDCA3-212ENST00000604599 LEPP41159 167 aa9.82□□□□□ -0.84
CDCA3-212ENST00000604599 TWIST1Q15672 202 aa9.82□□□□□ -0.84
CDCA3-212ENST00000604599 MRGPRG-AS1Q2M3A8 158 aa9.82□□□□□ -0.84
CDCA3-212ENST00000604599 NGBQ9NPG2 151 aa9.82□□□□□ -0.84
CDCA3-212ENST00000604599 FCER1GP30273 86 aa9.81□□□□□ -0.84
CDCA3-212ENST00000604599 SIGLEC15Q6ZMC9 328 aa9.81□□□□□ -0.84
CDCA3-212ENST00000604599 FOXC2Q99958 501 aa9.81□□□□□ -0.84
CDCA3-212ENST00000604599 TM2D2Q9BX73 214 aa9.81□□□□□ -0.84
CDCA3-212ENST00000604599 TMEM14CQ9P0S9 112 aa9.81□□□□□ -0.84
CDCA3-212ENST00000604599 IGKCP01834 107 aa9.81□□□□□ -0.84
CDCA3-212ENST00000604599 CNTFRP26992 372 aa9.81□□□□□ -0.84
CDCA3-212ENST00000604599 RPL27AP46776 148 aaKnown RBP9.81□□□□□ -0.84
CDCA3-212ENST00000604599 LCNL1Q6ZST4 164 aa9.81□□□□□ -0.84
CDCA3-212ENST00000604599 C20orf78Q9BR46 151 aa9.81□□□□□ -0.84
CDCA3-212ENST00000604599 PLSCR4Q9NRQ2 329 aa9.81□□□□□ -0.84
CDCA3-212ENST00000604599 MALRD1Q5VYJ5 2156 aa9.81□□□□□ -0.84
CDCA3-212ENST00000604599 PKDREJQ9NTG1 2253 aa9.81□□□□□ -0.84
CDCA3-212ENST00000604599 COL27A1Q8IZC6 1860 aaPredicted RBP9.81□□□□□ -0.84
CDCA3-212ENST00000604599 NPIPB5A8MRT5 1133 aa9.8□□□□□ -0.84
CDCA3-212ENST00000604599 LPAL2Q16609 132 aa9.8□□□□□ -0.84
CDCA3-212ENST00000604599 GAGE13Q4V321 117 aa9.8□□□□□ -0.84
CDCA3-212ENST00000604599 GEMIN7Q9H840 131 aaKnown RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms