RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 LEPROTL1O95214 131 aa3.9□□□□□ -1.78
SPTBN1-206ENST00000602898 CSN1S1P47710 185 aa3.9□□□□□ -1.78
SPTBN1-206ENST00000602898 TMEM258P61165 79 aa3.9□□□□□ -1.78
SPTBN1-206ENST00000602898 C12orf74Q32Q52 190 aa3.9□□□□□ -1.78
SPTBN1-206ENST00000602898 WDR38Q5JTN6 314 aa3.9□□□□□ -1.78
SPTBN1-206ENST00000602898 ZNRF1Q8ND25 227 aa3.9□□□□□ -1.78
SPTBN1-206ENST00000602898 NUP35Q8NFH5 326 aa3.9□□□□□ -1.78
SPTBN1-206ENST00000602898 ELSPBP1Q96BH3 223 aa3.9□□□□□ -1.78
SPTBN1-206ENST00000602898 OTORQ9NRC9 128 aa3.9□□□□□ -1.78
SPTBN1-206ENST00000602898 TIMM9Q9Y5J7 89 aa3.9□□□□□ -1.78
SPTBN1-206ENST00000602898 GON4LQ3T8J9 2241 aa3.9□□□□□ -1.79
SPTBN1-206ENST00000602898 CENPFP49454 3210 aa3.9□□□□□ -1.79
SPTBN1-206ENST00000602898 CTXND1A0A1B0GTU2 59 aa3.9□□□□□ -1.79
SPTBN1-206ENST00000602898 TEX50A0A1B0GTY4 177 aa3.9□□□□□ -1.79
SPTBN1-206ENST00000602898 C4orf51C9J302 202 aa3.9□□□□□ -1.79
SPTBN1-206ENST00000602898 NDUFB2O95178 105 aa3.9□□□□□ -1.79
SPTBN1-206ENST00000602898 IGHG1P01857 330 aa3.9□□□□□ -1.79
SPTBN1-206ENST00000602898 ARFRP1Q13795 201 aa3.9□□□□□ -1.79
SPTBN1-206ENST00000602898 PSMG4Q5JS54 123 aa3.9□□□□□ -1.79
SPTBN1-206ENST00000602898 FAM222AQ5U5X8 452 aa3.9□□□□□ -1.79
SPTBN1-206ENST00000602898 MORN3Q6PF18 240 aaPredicted RBP3.9□□□□□ -1.79
SPTBN1-206ENST00000602898 UNQ9165/PRO28630Q6UXU0 137 aa3.9□□□□□ -1.79
SPTBN1-206ENST00000602898 ZNF493Q6ZR52 646 aa3.9□□□□□ -1.79
SPTBN1-206ENST00000602898 SBSPONQ8IVN8 264 aa3.9□□□□□ -1.79
SPTBN1-206ENST00000602898 BRK1Q8WUW1 75 aa3.9□□□□□ -1.79
SPTBN1-206ENST00000602898 IGF2BP2-AS1Q96M15 143 aa3.9□□□□□ -1.79
SPTBN1-206ENST00000602898 TAS2R4Q9NYW5 299 aa3.9□□□□□ -1.79
SPTBN1-206ENST00000602898 POLEQ07864 2286 aa3.9□□□□□ -1.79
SPTBN1-206ENST00000602898 DOCK11Q5JSL3 2073 aa3.89□□□□□ -1.79
SPTBN1-206ENST00000602898 CRYGAP11844 174 aa3.89□□□□□ -1.79
SPTBN1-206ENST00000602898 NPPCP23582 126 aa3.89□□□□□ -1.79
SPTBN1-206ENST00000602898 PFN2P35080 140 aa3.89□□□□□ -1.79
SPTBN1-206ENST00000602898 SSX8Q7RTT4 187 aa3.89□□□□□ -1.79
SPTBN1-206ENST00000602898 PRNTQ86SH4 94 aa3.89□□□□□ -1.79
SPTBN1-206ENST00000602898 BORCS8Q96FH0 119 aa3.89□□□□□ -1.79
SPTBN1-206ENST00000602898 DPH3Q96FX2 82 aa3.89□□□□□ -1.79
SPTBN1-206ENST00000602898 NCOA6Q14686 2063 aaPredicted RBP3.89□□□□□ -1.79
SPTBN1-206ENST00000602898 CEP290O15078 2479 aa3.89□□□□□ -1.79
SPTBN1-206ENST00000602898 C11orf94C9JXX5 98 aa3.89□□□□□ -1.79
SPTBN1-206ENST00000602898 OVOL1O14753 267 aa3.89□□□□□ -1.79
SPTBN1-206ENST00000602898 NXPH3O95157 252 aa3.89□□□□□ -1.79
SPTBN1-206ENST00000602898 GP1BBP13224 206 aa3.89□□□□□ -1.79
SPTBN1-206ENST00000602898 DSCR4P56555 118 aaPredicted RBP3.89□□□□□ -1.79
SPTBN1-206ENST00000602898 GNB1P62873 340 aa3.89□□□□□ -1.79
SPTBN1-206ENST00000602898 RRN3P1Q2M238 152 aa3.89□□□□□ -1.79
SPTBN1-206ENST00000602898 KLF17Q5JT82 389 aaPredicted RBP3.89□□□□□ -1.79
SPTBN1-206ENST00000602898 ZNF441Q8N8Z8 693 aa3.89□□□□□ -1.79
SPTBN1-206ENST00000602898 WFDC11Q8NEX6 87 aa3.89□□□□□ -1.79
SPTBN1-206ENST00000602898 CNRIP1Q96F85 164 aaPredicted RBP3.89□□□□□ -1.79
SPTBN1-206ENST00000602898 C11orf68Q9H3H3 251 aaKnown RBP3.89□□□□□ -1.79
SPTBN1-206ENST00000602898 C11orf21Q9P2W6 132 aa3.89□□□□□ -1.79
SPTBN1-206ENST00000602898 MDC1Q14676 2089 aaKnown RBP3.89□□□□□ -1.79
SPTBN1-206ENST00000602898 ARID1AO14497 2285 aa3.88□□□□□ -1.79
SPTBN1-206ENST00000602898 SMIM26A0A096LP01 95 aa3.88□□□□□ -1.79
SPTBN1-206ENST00000602898 IGHV1-24A0A0C4DH33 117 aa3.88□□□□□ -1.79
SPTBN1-206ENST00000602898 TRBV7-7A0A0K0K1E9 115 aa3.88□□□□□ -1.79
SPTBN1-206ENST00000602898 LY6LH3BQJ8 138 aa3.88□□□□□ -1.79
SPTBN1-206ENST00000602898 ZNHIT1O43257 154 aa3.88□□□□□ -1.79
SPTBN1-206ENST00000602898 PDCD6O75340 191 aa3.88□□□□□ -1.79
SPTBN1-206ENST00000602898 NCR2O95944 276 aa3.88□□□□□ -1.79
SPTBN1-206ENST00000602898 FXYD2P54710 66 aa3.88□□□□□ -1.79
SPTBN1-206ENST00000602898 MRPL2Q5T653 305 aaKnown RBP3.88□□□□□ -1.79
SPTBN1-206ENST00000602898 TMEM14EPQ6UXP3 125 aa3.88□□□□□ -1.79
SPTBN1-206ENST00000602898 Q6ZPA2 131 aa3.88□□□□□ -1.79
SPTBN1-206ENST00000602898 AMMECR1Q9Y4X0 333 aaPredicted RBP3.88□□□□□ -1.79
SPTBN1-206ENST00000602898 A8MWL6 223 aa3.88□□□□□ -1.79
SPTBN1-206ENST00000602898 C9JCJ5 164 aa3.88□□□□□ -1.79
SPTBN1-206ENST00000602898 RPS27P42677 84 aaKnown RBP3.88□□□□□ -1.79
SPTBN1-206ENST00000602898 SLURP1P55000 103 aa3.88□□□□□ -1.79
SPTBN1-206ENST00000602898 RBMY1FQ15415 496 aaKnown RBP3.88□□□□□ -1.79
SPTBN1-206ENST00000602898 Q6ZQT7 251 aa3.88□□□□□ -1.79
SPTBN1-206ENST00000602898 LYZL2Q7Z4W2 148 aa3.88□□□□□ -1.79
SPTBN1-206ENST00000602898 LYPD6Q86Y78 171 aa3.88□□□□□ -1.79
SPTBN1-206ENST00000602898 CCL17Q92583 94 aa3.88□□□□□ -1.79
SPTBN1-206ENST00000602898 CHCHD5Q9BSY4 110 aa3.88□□□□□ -1.79
SPTBN1-206ENST00000602898 PYGO1Q9Y3Y4 419 aa3.88□□□□□ -1.79
SPTBN1-206ENST00000602898 V9GYV3 84 aa3.88□□□□□ -1.79
SPTBN1-206ENST00000602898 COL4A2P08572 1712 aa3.88□□□□□ -1.79
SPTBN1-206ENST00000602898 ARHGEF17Q96PE2 2063 aaPredicted RBP3.88□□□□□ -1.79
SPTBN1-206ENST00000602898 A0A0G2JRQ6 117 aa3.88□□□□□ -1.79
SPTBN1-206ENST00000602898 C3orf85A0A1B0GTC6 90 aa3.88□□□□□ -1.79
SPTBN1-206ENST00000602898 SSSCA1O60232 199 aa3.88□□□□□ -1.79
SPTBN1-206ENST00000602898 CST7O76096 145 aa3.88□□□□□ -1.79
SPTBN1-206ENST00000602898 DPM2O94777 84 aa3.88□□□□□ -1.79
SPTBN1-206ENST00000602898 SPINT3P49223 89 aa3.88□□□□□ -1.79
SPTBN1-206ENST00000602898 QRFPP83859 136 aa3.88□□□□□ -1.79
SPTBN1-206ENST00000602898 PLGLB1Q02325 96 aa3.88□□□□□ -1.79
SPTBN1-206ENST00000602898 Q6P435 159 aa3.88□□□□□ -1.79
SPTBN1-206ENST00000602898 LINC00173Q6ZV60 143 aa3.88□□□□□ -1.79
SPTBN1-206ENST00000602898 RAB42Q8N4Z0 105 aa3.88□□□□□ -1.79
SPTBN1-206ENST00000602898 IMUPQ9GZP8 106 aa3.88□□□□□ -1.79
SPTBN1-206ENST00000602898 C19orf25Q9UFG5 118 aaPredicted RBP3.88□□□□□ -1.79
SPTBN1-206ENST00000602898 PTPRBP23467 1997 aa3.87□□□□□ -1.79
SPTBN1-206ENST00000602898 TRIP12Q14669 1992 aaPredicted RBP3.87□□□□□ -1.79
SPTBN1-206ENST00000602898 ARID1BQ8NFD5 2236 aaPredicted RBP3.87□□□□□ -1.79
SPTBN1-206ENST00000602898 A0A1B0GWA3 101 aa3.87□□□□□ -1.79
SPTBN1-206ENST00000602898 RBAKDNA6NC62 111 aa3.87□□□□□ -1.79
SPTBN1-206ENST00000602898 K7ERJ3 54 aa3.87□□□□□ -1.79
SPTBN1-206ENST00000602898 PLXNB1O43157 2135 aa3.87□□□□□ -1.79
SPTBN1-206ENST00000602898 FRMD6-AS1P0C7T7 363 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms