RNA–Protein interactions for RNA: ENST00000601324.1

VRK3-222, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-222ENST00000601324 TEX50A0A1B0GTY4 177 aa2.72□□□□□ -1.97
VRK3-222ENST00000601324 YIF1AO95070 293 aa2.72□□□□□ -1.97
VRK3-222ENST00000601324 HBE1P02100 147 aa2.72□□□□□ -1.97
VRK3-222ENST00000601324 ATP5G1P05496 136 aa2.72□□□□□ -1.97
VRK3-222ENST00000601324 OR13C7P0DN81 318 aa2.72□□□□□ -1.97
VRK3-222ENST00000601324 TSPOP30536 169 aa2.72□□□□□ -1.97
VRK3-222ENST00000601324 ATP5G3P48201 142 aa2.72□□□□□ -1.97
VRK3-222ENST00000601324 GBX2P52951 348 aaPredicted RBP2.72□□□□□ -1.97
VRK3-222ENST00000601324 FXYD7P58549 80 aa2.72□□□□□ -1.97
VRK3-222ENST00000601324 TAS2R43P59537 309 aa2.72□□□□□ -1.97
VRK3-222ENST00000601324 NUTF2P61970 127 aaKnown RBP2.72□□□□□ -1.97
VRK3-222ENST00000601324 RRN3P1Q2M238 152 aa2.72□□□□□ -1.97
VRK3-222ENST00000601324 KCTD21Q4G0X4 260 aa2.72□□□□□ -1.97
VRK3-222ENST00000601324 Q56UQ5 140 aa2.72□□□□□ -1.97
VRK3-222ENST00000601324 PSMG4Q5JS54 123 aa2.72□□□□□ -1.97
VRK3-222ENST00000601324 THOC7Q6I9Y2 204 aaKnown RBP2.72□□□□□ -1.97
VRK3-222ENST00000601324 NKAPP1Q8N9T2 125 aa2.72□□□□□ -1.97
VRK3-222ENST00000601324 OR4S2Q8NH73 311 aa2.72□□□□□ -1.97
VRK3-222ENST00000601324 ARHGAP5-AS1Q96IT6 56 aa2.72□□□□□ -1.97
VRK3-222ENST00000601324 FAM210AQ96ND0 272 aa2.72□□□□□ -1.97
VRK3-222ENST00000601324 DERL3Q96Q80 235 aa2.72□□□□□ -1.97
VRK3-222ENST00000601324 TMEM59Q9BXS4 323 aa2.72□□□□□ -1.97
VRK3-222ENST00000601324 PECRQ9BY49 303 aa2.72□□□□□ -1.97
VRK3-222ENST00000601324 SLC35B3Q9H1N7 401 aa2.72□□□□□ -1.97
VRK3-222ENST00000601324 PLEKHJ1Q9NW61 149 aa2.72□□□□□ -1.97
VRK3-222ENST00000601324 TRAV26-1A0A087WT03 109 aa2.71□□□□□ -1.98
VRK3-222ENST00000601324 A0A096LPF7 62 aa2.71□□□□□ -1.98
VRK3-222ENST00000601324 ZNF701M0R085 212 aaPredicted RBP2.71□□□□□ -1.98
VRK3-222ENST00000601324 GNGT2O14610 69 aa2.71□□□□□ -1.98
VRK3-222ENST00000601324 BET1O15155 118 aa2.71□□□□□ -1.98
VRK3-222ENST00000601324 SIVA1O15304 175 aa2.71□□□□□ -1.98
VRK3-222ENST00000601324 RBFOX2O43251 390 aaKnown RBP eCLIP2.71□□□□□ -1.98
VRK3-222ENST00000601324 TMEM50AO95807 157 aa2.71□□□□□ -1.98
VRK3-222ENST00000601324 UBBP0CG47 229 aa2.71□□□□□ -1.98
VRK3-222ENST00000601324 DEFB130BP0DP73 79 aa2.71□□□□□ -1.98
VRK3-222ENST00000601324 DEFB130AP0DP74 79 aa2.71□□□□□ -1.98
VRK3-222ENST00000601324 DCKP27707 260 aa2.71□□□□□ -1.98
VRK3-222ENST00000601324 ETV1P50549 477 aa2.71□□□□□ -1.98
VRK3-222ENST00000601324 MNAT1P51948 309 aa2.71□□□□□ -1.98
VRK3-222ENST00000601324 WFDC2Q14508 124 aa2.71□□□□□ -1.98
VRK3-222ENST00000601324 CLINT1Q14677 625 aa2.71□□□□□ -1.98
VRK3-222ENST00000601324 ACSM3Q53FZ2 586 aa2.71□□□□□ -1.98
VRK3-222ENST00000601324 Q8N814 137 aa2.71□□□□□ -1.98
VRK3-222ENST00000601324 UBAC2Q8NBM4 344 aa2.71□□□□□ -1.98
VRK3-222ENST00000601324 OR51S1Q8NGJ8 323 aa2.71□□□□□ -1.98
VRK3-222ENST00000601324 OR1P1Q8NH06 330 aa2.71□□□□□ -1.98
VRK3-222ENST00000601324 OR10J5Q8NHC4 309 aa2.71□□□□□ -1.98
VRK3-222ENST00000601324 SLC25A46Q96AG3 418 aa2.71□□□□□ -1.98
VRK3-222ENST00000601324 SEC22AQ96IW7 307 aa2.71□□□□□ -1.98
VRK3-222ENST00000601324 LINC00167Q96N53 147 aa2.71□□□□□ -1.98
VRK3-222ENST00000601324 HSD17B10Q99714 261 aaKnown RBP2.71□□□□□ -1.98
VRK3-222ENST00000601324 CMSS1Q9BQ75 279 aaKnown RBP2.71□□□□□ -1.98
VRK3-222ENST00000601324 GINS3Q9BRX5 216 aa2.71□□□□□ -1.98
VRK3-222ENST00000601324 SAV1Q9H4B6 383 aaPredicted RBP2.71□□□□□ -1.98
VRK3-222ENST00000601324 SLC25A22Q9H936 323 aa2.71□□□□□ -1.98
VRK3-222ENST00000601324 PLGRKTQ9HBL7 147 aa2.71□□□□□ -1.98
VRK3-222ENST00000601324 FGF20Q9NP95 211 aaPredicted RBP2.71□□□□□ -1.98
VRK3-222ENST00000601324 MRPL36Q9P0J6 103 aaKnown RBP2.71□□□□□ -1.98
VRK3-222ENST00000601324 PRELID3BQ9Y3B1 194 aa2.71□□□□□ -1.98
VRK3-222ENST00000601324 V9GY05 133 aa2.71□□□□□ -1.98
VRK3-222ENST00000601324 METTL21EPA6NDL7 271 aa2.7□□□□□ -1.98
VRK3-222ENST00000601324 ZNF705GA8MUZ8 300 aaPredicted RBP2.7□□□□□ -1.98
VRK3-222ENST00000601324 MFNGO00587 321 aa2.7□□□□□ -1.98
VRK3-222ENST00000601324 DENRO43583 198 aaKnown RBP2.7□□□□□ -1.98
VRK3-222ENST00000601324 MT-CO2P00403 227 aa2.7□□□□□ -1.98
VRK3-222ENST00000601324 HRASP01112 189 aa2.7□□□□□ -1.98
VRK3-222ENST00000601324 IGKV1-17P01599 117 aa2.7□□□□□ -1.98
VRK3-222ENST00000601324 IGLV2-8P01709 118 aa2.7□□□□□ -1.98
VRK3-222ENST00000601324 TRAPPC2P0DI81 140 aa2.7□□□□□ -1.98
VRK3-222ENST00000601324 TRAPPC2BP0DI82 140 aa2.7□□□□□ -1.98
VRK3-222ENST00000601324 M6PRP20645 277 aa2.7□□□□□ -1.98
VRK3-222ENST00000601324 NPPCP23582 126 aa2.7□□□□□ -1.98
VRK3-222ENST00000601324 CTRLP40313 264 aa2.7□□□□□ -1.98
VRK3-222ENST00000601324 TAS2R31P59538 309 aa2.7□□□□□ -1.98
VRK3-222ENST00000601324 SELENOTP62341 195 aa2.7□□□□□ -1.98
VRK3-222ENST00000601324 DHRS2Q13268 280 aa2.7□□□□□ -1.98
VRK3-222ENST00000601324 RCN1Q15293 331 aa2.7□□□□□ -1.98
VRK3-222ENST00000601324 FOXI2Q6ZQN5 318 aa2.7□□□□□ -1.98
VRK3-222ENST00000601324 Q6ZVH6 145 aa2.7□□□□□ -1.98
VRK3-222ENST00000601324 CIRBP-AS1Q8TBR5 109 aa2.7□□□□□ -1.98
VRK3-222ENST00000601324 APH1BQ8WW43 257 aa2.7□□□□□ -1.98
VRK3-222ENST00000601324 MAFIPQ8WZ33 124 aa2.7□□□□□ -1.98
VRK3-222ENST00000601324 LSM10Q969L4 123 aaKnown RBP2.7□□□□□ -1.98
VRK3-222ENST00000601324 RPUSD4Q96CM3 377 aaKnown RBP2.7□□□□□ -1.98
VRK3-222ENST00000601324 GNPNAT1Q96EK6 184 aaPredicted RBP2.7□□□□□ -1.98
VRK3-222ENST00000601324 MRPL48Q96GC5 212 aaKnown RBP2.7□□□□□ -1.98
VRK3-222ENST00000601324 DCUN1D5Q9BTE7 237 aa2.7□□□□□ -1.98
VRK3-222ENST00000601324 CHAC1Q9BUX1 264 aa2.7□□□□□ -1.98
VRK3-222ENST00000601324 BABAM2Q9NXR7 383 aa2.7□□□□□ -1.98
VRK3-222ENST00000601324 A0A0J9YX75 114 aa2.69□□□□□ -1.98
VRK3-222ENST00000601324 A0A0J9YY99 117 aa2.69□□□□□ -1.98
VRK3-222ENST00000601324 G3V2T6 193 aa2.69□□□□□ -1.98
VRK3-222ENST00000601324 SCGNO76038 276 aa2.69□□□□□ -1.98
VRK3-222ENST00000601324 HSMCR30P0CW71 290 aa2.69□□□□□ -1.98
VRK3-222ENST00000601324 PSG9Q00887 426 aa2.69□□□□□ -1.98
VRK3-222ENST00000601324 INSL4Q14641 139 aa2.69□□□□□ -1.98
VRK3-222ENST00000601324 MSMO1Q15800 293 aa2.69□□□□□ -1.98
VRK3-222ENST00000601324 Q6ZRU5 148 aa2.69□□□□□ -1.98
VRK3-222ENST00000601324 ZFP41Q8N8Y5 198 aa2.69□□□□□ -1.98
VRK3-222ENST00000601324 OR1L8Q8NGR8 309 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms