RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 PSG3Q16557 428 aa15.91■□□□□ 0.14
SHKBP1-225ENST00000600733 TP73-AS1Q9UF72 201 aa15.91■□□□□ 0.14
SHKBP1-225ENST00000600733 A0A1B0GUT8 65 aa15.9■□□□□ 0.14
SHKBP1-225ENST00000600733 OR4C46A6NHA9 309 aa15.9■□□□□ 0.14
SHKBP1-225ENST00000600733 SYS1-DBNDD2H3BUS1 97 aa15.9■□□□□ 0.14
SHKBP1-225ENST00000600733 CCL21O00585 134 aa15.9■□□□□ 0.14
SHKBP1-225ENST00000600733 GNG7O60262 68 aa15.9■□□□□ 0.14
SHKBP1-225ENST00000600733 NPBQ8NG41 125 aa15.9■□□□□ 0.14
SHKBP1-225ENST00000600733 ZFP30Q9Y2G7 519 aa15.9■□□□□ 0.14
SHKBP1-225ENST00000600733 CRXO43186 299 aaPredicted RBP15.89■□□□□ 0.13
SHKBP1-225ENST00000600733 NDUFB8O95169 186 aa15.89■□□□□ 0.13
SHKBP1-225ENST00000600733 CSN3P07498 182 aa15.89■□□□□ 0.13
SHKBP1-225ENST00000600733 FOSL1P15407 271 aa15.89■□□□□ 0.13
SHKBP1-225ENST00000600733 FANCD2OSQ96PS1 177 aa15.89■□□□□ 0.13
SHKBP1-225ENST00000600733 RNF24Q9Y225 148 aa15.89■□□□□ 0.13
SHKBP1-225ENST00000600733 WI2-2373I1.2A0A1W2PRP0 233 aa15.89■□□□□ 0.13
SHKBP1-225ENST00000600733 C5orf64Q2M2E5 130 aa15.89■□□□□ 0.13
SHKBP1-225ENST00000600733 FBXL19-AS1Q494R0 122 aa15.89■□□□□ 0.13
SHKBP1-225ENST00000600733 TPPP3Q9BW30 176 aa15.89■□□□□ 0.13
SHKBP1-225ENST00000600733 WNK2Q9Y3S1 2297 aa15.88■□□□□ 0.13
SHKBP1-225ENST00000600733 K7EQM0 130 aa15.88■□□□□ 0.13
SHKBP1-225ENST00000600733 CEACAM3P40198 252 aa15.88■□□□□ 0.13
SHKBP1-225ENST00000600733 NDPQ00604 133 aa15.88■□□□□ 0.13
SHKBP1-225ENST00000600733 LYPD1Q8N2G4 141 aa15.88■□□□□ 0.13
SHKBP1-225ENST00000600733 C8orf49Q96NF6 230 aa15.88■□□□□ 0.13
SHKBP1-225ENST00000600733 MRPS16Q9Y3D3 137 aaKnown RBP15.88■□□□□ 0.13
SHKBP1-225ENST00000600733 IGF2RP11717 2491 aa15.88■□□□□ 0.13
SHKBP1-225ENST00000600733 ATRXP46100 2492 aa15.88■□□□□ 0.13
SHKBP1-225ENST00000600733 C20orf202A1L168 122 aa15.88■□□□□ 0.13
SHKBP1-225ENST00000600733 RAB1BQ9H0U4 201 aa15.88■□□□□ 0.13
SHKBP1-225ENST00000600733 IGLV11-55A0A075B6I3 123 aa15.87■□□□□ 0.13
SHKBP1-225ENST00000600733 ODF3BA8MYP8 253 aa15.87■□□□□ 0.13
SHKBP1-225ENST00000600733 IGHV3-23P01764 117 aa15.87■□□□□ 0.13
SHKBP1-225ENST00000600733 MCRIP2Q9BUT9 160 aaKnown RBP15.87■□□□□ 0.13
SHKBP1-225ENST00000600733 TMUB1Q9BVT8 246 aa15.87■□□□□ 0.13
SHKBP1-225ENST00000600733 LOC105371242A0A075B767 164 aa15.87■□□□□ 0.13
SHKBP1-225ENST00000600733 F8W735 103 aaPredicted RBP15.87■□□□□ 0.13
SHKBP1-225ENST00000600733 DYNAPQ8N1N2 210 aa15.87■□□□□ 0.13
SHKBP1-225ENST00000600733 TIMD4Q96H15 378 aa15.87■□□□□ 0.13
SHKBP1-225ENST00000600733 TIMM8BQ9Y5J9 83 aaPredicted RBP15.87■□□□□ 0.13
SHKBP1-225ENST00000600733 MED13LQ71F56 2210 aa15.86■□□□□ 0.13
SHKBP1-225ENST00000600733 hDV102S1A0JD36 115 aa15.86■□□□□ 0.13
SHKBP1-225ENST00000600733 NCBP2LA6PVI3 153 aaKnown RBP15.86■□□□□ 0.13
SHKBP1-225ENST00000600733 H0Y8G0 127 aa15.85■□□□□ 0.13
SHKBP1-225ENST00000600733 RIGQ13278 110 aa15.85■□□□□ 0.13
SHKBP1-225ENST00000600733 Q6ZVH6 145 aa15.85■□□□□ 0.13
SHKBP1-225ENST00000600733 ARPC1AQ92747 370 aa15.85■□□□□ 0.13
SHKBP1-225ENST00000600733 PRTN3P24158 256 aa15.85■□□□□ 0.13
SHKBP1-225ENST00000600733 MFAP4P55083 255 aa15.85■□□□□ 0.13
SHKBP1-225ENST00000600733 M0R1W7 72 aa15.84■□□□□ 0.13
SHKBP1-225ENST00000600733 C1RLQ9NZP8 487 aa15.84■□□□□ 0.13
SHKBP1-225ENST00000600733 TRAV30A0A087WSZ9 112 aa15.84■□□□□ 0.13
SHKBP1-225ENST00000600733 NPIPB5A8MRT5 1133 aa15.84■□□□□ 0.13
SHKBP1-225ENST00000600733 ZNF562Q6V9R5 426 aa15.84■□□□□ 0.13
SHKBP1-225ENST00000600733 AAMDCQ9H7C9 122 aa15.84■□□□□ 0.13
SHKBP1-225ENST00000600733 TMSB15BA0A087X1C1 80 aa15.83■□□□□ 0.13
SHKBP1-225ENST00000600733 ADORA2A-AS1P86434 159 aa15.83■□□□□ 0.13
SHKBP1-225ENST00000600733 NEU4Q8WWR8 484 aaPredicted RBP15.83■□□□□ 0.13
SHKBP1-225ENST00000600733 CT45A10P0DMU9 189 aa15.83■□□□□ 0.12
SHKBP1-225ENST00000600733 UNQ5815/PRO19632Q6UWF5 114 aa15.83■□□□□ 0.12
SHKBP1-225ENST00000600733 C21orf62Q9NYP8 219 aa15.83■□□□□ 0.12
SHKBP1-225ENST00000600733 OR2T8A6NH00 312 aa15.82■□□□□ 0.12
SHKBP1-225ENST00000600733 OR5AL1P0C617 328 aa15.82■□□□□ 0.12
SHKBP1-225ENST00000600733 PDE6HQ13956 83 aa15.82■□□□□ 0.12
SHKBP1-225ENST00000600733 DMRTA1Q5VZB9 504 aa15.82■□□□□ 0.12
SHKBP1-225ENST00000600733 MAP1LC3CQ9BXW4 147 aa15.82■□□□□ 0.12
SHKBP1-225ENST00000600733 IGKV2-40A0A087WW87 121 aaPredicted RBP15.82■□□□□ 0.12
SHKBP1-225ENST00000600733 IGKV2D-40P01614 121 aaPredicted RBP15.82■□□□□ 0.12
SHKBP1-225ENST00000600733 VMO1Q7Z5L0 202 aa15.82■□□□□ 0.12
SHKBP1-225ENST00000600733 TMEM190Q8WZ59 177 aa15.82■□□□□ 0.12
SHKBP1-225ENST00000600733 PMCHL2Q9BQD1 86 aa15.82■□□□□ 0.12
SHKBP1-225ENST00000600733 TTC9CQ8N5M4 171 aa15.81■□□□□ 0.12
SHKBP1-225ENST00000600733 ST20Q9HBF5 79 aa15.81■□□□□ 0.12
SHKBP1-225ENST00000600733 IGHV3OR16-8A0A075B7F1 116 aa15.8■□□□□ 0.12
SHKBP1-225ENST00000600733 C11orf71Q6IPW1 123 aa15.8■□□□□ 0.12
SHKBP1-225ENST00000600733 GATD1Q8NB37 220 aa15.8■□□□□ 0.12
SHKBP1-225ENST00000600733 ZNF48Q96MX3 618 aaPredicted RBP15.8■□□□□ 0.12
SHKBP1-225ENST00000600733 TMEM191AQ9H0A3 160 aa15.8■□□□□ 0.12
SHKBP1-225ENST00000600733 AP5S1Q9NUS5 200 aa15.8■□□□□ 0.12
SHKBP1-225ENST00000600733 LYZL1Q6UWQ5 148 aa15.8■□□□□ 0.12
SHKBP1-225ENST00000600733 MUC21A0A0G2JKD1 596 aa15.79■□□□□ 0.12
SHKBP1-225ENST00000600733 MUC21A0A140T8X8 626 aa15.79■□□□□ 0.12
SHKBP1-225ENST00000600733 TMEM213A2RRL7 107 aa15.79■□□□□ 0.12
SHKBP1-225ENST00000600733 SH2D1AO60880 128 aa15.79■□□□□ 0.12
SHKBP1-225ENST00000600733 CSN1S1P47710 185 aa15.79■□□□□ 0.12
SHKBP1-225ENST00000600733 MUC21Q5SSG8 566 aa15.79■□□□□ 0.12
SHKBP1-225ENST00000600733 IGFL4Q6B9Z1 124 aa15.79■□□□□ 0.12
SHKBP1-225ENST00000600733 HSPB8Q9UJY1 196 aa15.79■□□□□ 0.12
SHKBP1-225ENST00000600733 SPTBN1Q01082 2364 aaKnown RBP15.79■□□□□ 0.12
SHKBP1-225ENST00000600733 IGHV3-35A0A0C4DH35 117 aa15.79■□□□□ 0.12
SHKBP1-225ENST00000600733 Q6AWC8 147 aa15.79■□□□□ 0.12
SHKBP1-225ENST00000600733 S100A7AQ86SG5 101 aa15.79■□□□□ 0.12
SHKBP1-225ENST00000600733 COL6A6A6NMZ7 2263 aa15.79■□□□□ 0.12
SHKBP1-225ENST00000600733 CACNA1BQ00975 2339 aa15.78■□□□□ 0.12
SHKBP1-225ENST00000600733 A0A1B0GW15 77 aa15.78■□□□□ 0.12
SHKBP1-225ENST00000600733 SERTM2A0A1B0GWG4 89 aa15.78■□□□□ 0.12
SHKBP1-225ENST00000600733 TCF21O43680 179 aa15.78■□□□□ 0.12
SHKBP1-225ENST00000600733 FAM106CPP0CH98 169 aa15.78■□□□□ 0.12
SHKBP1-225ENST00000600733 ZFP36P26651 326 aaKnown RBP15.78■□□□□ 0.12
SHKBP1-225ENST00000600733 FAM106AQ4KMX7 169 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms