RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 ATP5LO75964 103 aa7.83□□□□□ -1.16
NFKB1-212ENST00000600343 UCNP55089 124 aa7.83□□□□□ -1.16
NFKB1-212ENST00000600343 C10orf113Q5VZT2 155 aa7.83□□□□□ -1.16
NFKB1-212ENST00000600343 FXYD5Q96DB9 178 aa7.83□□□□□ -1.16
NFKB1-212ENST00000600343 PTPRBP23467 1997 aa7.83□□□□□ -1.16
NFKB1-212ENST00000600343 TET2Q6N021 2002 aaPredicted RBP7.83□□□□□ -1.16
NFKB1-212ENST00000600343 PCBD1P61457 104 aa7.83□□□□□ -1.16
NFKB1-212ENST00000600343 FLYWCH2Q96CP2 140 aaKnown RBP7.83□□□□□ -1.16
NFKB1-212ENST00000600343 PROK2Q9HC23 129 aa7.83□□□□□ -1.16
NFKB1-212ENST00000600343 PRNDQ9UKY0 176 aa7.83□□□□□ -1.16
NFKB1-212ENST00000600343 MZT1Q08AG7 82 aa7.82□□□□□ -1.16
NFKB1-212ENST00000600343 FOXF2Q12947 444 aa7.82□□□□□ -1.16
NFKB1-212ENST00000600343 PRDM14Q9GZV8 571 aa7.82□□□□□ -1.16
NFKB1-212ENST00000600343 M0R2P5 195 aa7.82□□□□□ -1.16
NFKB1-212ENST00000600343 PLAUP00749 431 aa7.82□□□□□ -1.16
NFKB1-212ENST00000600343 MYCNOSP40205 109 aa7.82□□□□□ -1.16
NFKB1-212ENST00000600343 U3KQK5 164 aa7.82□□□□□ -1.16
NFKB1-212ENST00000600343 CKS2P33552 79 aa7.82□□□□□ -1.16
NFKB1-212ENST00000600343 FAM104BQ5XKR9 115 aa7.82□□□□□ -1.16
NFKB1-212ENST00000600343 NPIPB3Q92617 1050 aa7.82□□□□□ -1.16
NFKB1-212ENST00000600343 TIMD4Q96H15 378 aa7.82□□□□□ -1.16
NFKB1-212ENST00000600343 MRPL35Q9NZE8 188 aaKnown RBP7.82□□□□□ -1.16
NFKB1-212ENST00000600343 BRWD1Q9NSI6 2320 aa7.82□□□□□ -1.16
NFKB1-212ENST00000600343 FAM236AA0A1B0GUQ0 79 aa7.81□□□□□ -1.16
NFKB1-212ENST00000600343 FAM236BA0A1B0GV22 79 aa7.81□□□□□ -1.16
NFKB1-212ENST00000600343 TMEM30CPA0ZSE6 113 aa7.81□□□□□ -1.16
NFKB1-212ENST00000600343 C15orf61A6NNL5 157 aa7.81□□□□□ -1.16
NFKB1-212ENST00000600343 SMKR1H3BMG3 65 aa7.81□□□□□ -1.16
NFKB1-212ENST00000600343 OVOL3O00110 214 aa7.81□□□□□ -1.16
NFKB1-212ENST00000600343 UBE2D1P51668 147 aa7.81□□□□□ -1.16
NFKB1-212ENST00000600343 RPS28P62857 69 aaKnown RBP7.81□□□□□ -1.16
NFKB1-212ENST00000600343 FOXB1Q99853 325 aa7.81□□□□□ -1.16
NFKB1-212ENST00000600343 ZNF56Q15929 161 aa7.81□□□□□ -1.16
NFKB1-212ENST00000600343 MRPL51Q4U2R6 128 aaKnown RBP7.81□□□□□ -1.16
NFKB1-212ENST00000600343 C2orf27AQ580R0 203 aa7.81□□□□□ -1.16
NFKB1-212ENST00000600343 RBAKDNA6NC62 111 aa7.81□□□□□ -1.16
NFKB1-212ENST00000600343 IGHG3P01860 377 aa7.81□□□□□ -1.16
NFKB1-212ENST00000600343 MLANAQ16655 118 aa7.81□□□□□ -1.16
NFKB1-212ENST00000600343 OOEPA6NGQ2 149 aa7.81□□□□□ -1.16
NFKB1-212ENST00000600343 UQCRQO14949 82 aa7.81□□□□□ -1.16
NFKB1-212ENST00000600343 VEGFBP49765 207 aa7.81□□□□□ -1.16
NFKB1-212ENST00000600343 TNFAIP6P98066 277 aaPredicted RBP7.81□□□□□ -1.16
NFKB1-212ENST00000600343 PLGLB1Q02325 96 aa7.81□□□□□ -1.16
NFKB1-212ENST00000600343 PRNTQ86SH4 94 aa7.81□□□□□ -1.16
NFKB1-212ENST00000600343 MSRB2Q9Y3D2 182 aa7.81□□□□□ -1.16
NFKB1-212ENST00000600343 EML6Q6ZMW3 1958 aa7.8□□□□□ -1.16
NFKB1-212ENST00000600343 TM4SF5O14894 197 aa7.8□□□□□ -1.16
NFKB1-212ENST00000600343 TIMM23O14925 209 aa7.8□□□□□ -1.16
NFKB1-212ENST00000600343 NDUFA3O95167 84 aa7.8□□□□□ -1.16
NFKB1-212ENST00000600343 TCRAP04437 139 aa7.8□□□□□ -1.16
NFKB1-212ENST00000600343 LILRA6Q6PI73 481 aa7.8□□□□□ -1.16
NFKB1-212ENST00000600343 Q86TA4 180 aa7.8□□□□□ -1.16
NFKB1-212ENST00000600343 HRCT1Q6UXD1 115 aa7.8□□□□□ -1.16
NFKB1-212ENST00000600343 TRPT1Q86TN4 253 aaKnown RBP7.8□□□□□ -1.16
NFKB1-212ENST00000600343 C11orf53Q8IXP5 236 aa7.8□□□□□ -1.16
NFKB1-212ENST00000600343 ZNF714Q96N38 554 aa7.8□□□□□ -1.16
NFKB1-212ENST00000600343 DEFB118Q96PH6 123 aa7.8□□□□□ -1.16
NFKB1-212ENST00000600343 IGHV3OR15-7A0A075B7D8 119 aa7.79□□□□□ -1.16
NFKB1-212ENST00000600343 FKBP2P26885 142 aaKnown RBP7.79□□□□□ -1.16
NFKB1-212ENST00000600343 PMVKQ15126 192 aa7.79□□□□□ -1.16
NFKB1-212ENST00000600343 DUX4L9Q6RFH8 374 aaPredicted RBP7.79□□□□□ -1.16
NFKB1-212ENST00000600343 SCGB1D4Q6XE38 83 aa7.79□□□□□ -1.16
NFKB1-212ENST00000600343 DUX3Q96PT4 197 aa7.79□□□□□ -1.16
NFKB1-212ENST00000600343 S1PR3Q99500 378 aa7.79□□□□□ -1.16
NFKB1-212ENST00000600343 RTL8AQ9BWD3 113 aa7.79□□□□□ -1.16
NFKB1-212ENST00000600343 TEX49A0A1B0GTD5 131 aa7.79□□□□□ -1.16
NFKB1-212ENST00000600343 K7ESF4 209 aa7.79□□□□□ -1.16
NFKB1-212ENST00000600343 LGALS1P09382 135 aaKnown RBP7.79□□□□□ -1.16
NFKB1-212ENST00000600343 SRSF2Q01130 221 aaKnown RBP7.79□□□□□ -1.16
NFKB1-212ENST00000600343 LINC01559Q495D7 138 aa7.79□□□□□ -1.16
NFKB1-212ENST00000600343 IFI27L2Q9H2X8 130 aa7.79□□□□□ -1.16
NFKB1-212ENST00000600343 TRGV11A0A075B6L2 103 aa7.79□□□□□ -1.16
NFKB1-212ENST00000600343 J3QT63 122 aa7.79□□□□□ -1.16
NFKB1-212ENST00000600343 CRIP2P52943 208 aaPredicted RBP7.79□□□□□ -1.16
NFKB1-212ENST00000600343 C4orf26Q17RF5 130 aa7.79□□□□□ -1.16
NFKB1-212ENST00000600343 GAGE2AQ6NT46 116 aa7.79□□□□□ -1.16
NFKB1-212ENST00000600343 NDUFA11Q86Y39 141 aa7.79□□□□□ -1.16
NFKB1-212ENST00000600343 LINC00526Q96FQ7 95 aa7.79□□□□□ -1.16
NFKB1-212ENST00000600343 H3BTX0 84 aa7.78□□□□□ -1.16
NFKB1-212ENST00000600343 LINC00305Q7Z4B0 112 aa7.78□□□□□ -1.16
NFKB1-212ENST00000600343 ZNRF2Q8NHG8 242 aa7.78□□□□□ -1.16
NFKB1-212ENST00000600343 OCIAD1Q9NX40 245 aa7.78□□□□□ -1.16
NFKB1-212ENST00000600343 LAMA3Q16787 3333 aa7.78□□□□□ -1.16
NFKB1-212ENST00000600343 NOTCH4Q99466 2003 aa7.78□□□□□ -1.16
NFKB1-212ENST00000600343 SPANXCQ9NY87 97 aa7.78□□□□□ -1.16
NFKB1-212ENST00000600343 FOXA2Q9Y261 457 aaPredicted RBP7.78□□□□□ -1.16
NFKB1-212ENST00000600343 CHCHD2Q9Y6H1 151 aaPredicted RBP7.78□□□□□ -1.16
NFKB1-212ENST00000600343 UNC80Q8N2C7 3258 aa7.78□□□□□ -1.16
NFKB1-212ENST00000600343 MBD3L4A6NDZ8 208 aaPredicted RBP7.78□□□□□ -1.16
NFKB1-212ENST00000600343 MBD3L3A6NE82 208 aaPredicted RBP7.78□□□□□ -1.16
NFKB1-212ENST00000600343 MBD3L5A6NJ08 208 aaPredicted RBP7.78□□□□□ -1.16
NFKB1-212ENST00000600343 CD3EP07766 207 aa7.78□□□□□ -1.16
NFKB1-212ENST00000600343 PATE2Q6UY27 113 aa7.78□□□□□ -1.16
NFKB1-212ENST00000600343 MRPL20Q9BYC9 149 aaKnown RBP7.78□□□□□ -1.16
NFKB1-212ENST00000600343 IGLV3-32A0A0A0MS00 114 aa7.77□□□□□ -1.17
NFKB1-212ENST00000600343 TRBV7-7A0A0K0K1E9 115 aa7.77□□□□□ -1.17
NFKB1-212ENST00000600343 Q71RC1 249 aaPredicted RBP7.77□□□□□ -1.17
NFKB1-212ENST00000600343 Q9H3A6 140 aa7.77□□□□□ -1.17
NFKB1-212ENST00000600343 KIAA0100Q14667 2235 aaKnown RBP7.77□□□□□ -1.17
NFKB1-212ENST00000600343 CDX4O14627 284 aaPredicted RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms