RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 POLR3KQ9Y2Y1 108 aaPredicted RBP9.6□□□□□ -0.87
SCN8A-208ENST00000599343 COL5A3P25940 1745 aaPredicted RBP9.6□□□□□ -0.87
SCN8A-208ENST00000599343 COL8A2P25067 703 aa9.6□□□□□ -0.87
SCN8A-208ENST00000599343 RNF5Q99942 180 aa9.6□□□□□ -0.87
SCN8A-208ENST00000599343 TP53TG1Q9Y2A0 90 aa9.6□□□□□ -0.87
SCN8A-208ENST00000599343 A0A0G2JNJ9 132 aa9.6□□□□□ -0.87
SCN8A-208ENST00000599343 C9orf153Q5TBE3 101 aa9.6□□□□□ -0.87
SCN8A-208ENST00000599343 PRSS57Q6UWY2 283 aa9.6□□□□□ -0.87
SCN8A-208ENST00000599343 C20orf204Q6ZNR8 217 aa9.6□□□□□ -0.87
SCN8A-208ENST00000599343 IL17RELQ6ZVW7 336 aa9.6□□□□□ -0.87
SCN8A-208ENST00000599343 Q9UFV3 132 aa9.6□□□□□ -0.87
SCN8A-208ENST00000599343 TNS1Q9HBL0 1735 aaKnown RBP9.6□□□□□ -0.87
SCN8A-208ENST00000599343 OVOL3O00110 214 aa9.6□□□□□ -0.87
SCN8A-208ENST00000599343 SYNJ2BPP57105 145 aa9.6□□□□□ -0.87
SCN8A-208ENST00000599343 DSCR9P59020 149 aa9.6□□□□□ -0.87
SCN8A-208ENST00000599343 ARID2Q68CP9 1835 aa9.59□□□□□ -0.87
SCN8A-208ENST00000599343 CNOT1A5YKK6 2376 aaKnown RBP9.59□□□□□ -0.87
SCN8A-208ENST00000599343 FAM231BA6NCW3 169 aa9.59□□□□□ -0.87
SCN8A-208ENST00000599343 FAM223BA6NKX1 122 aa9.59□□□□□ -0.87
SCN8A-208ENST00000599343 IGKV1-16P04430 117 aa9.59□□□□□ -0.87
SCN8A-208ENST00000599343 GNLYP22749 145 aa9.59□□□□□ -0.87
SCN8A-208ENST00000599343 FAM223AQ8IWN6 122 aa9.59□□□□□ -0.87
SCN8A-208ENST00000599343 INTS1Q8N201 2190 aaKnown RBP9.59□□□□□ -0.87
SCN8A-208ENST00000599343 CLPSP04118 112 aa9.59□□□□□ -0.87
SCN8A-208ENST00000599343 Q6ZRM9 215 aa9.59□□□□□ -0.87
SCN8A-208ENST00000599343 PSME4Q14997 1843 aa9.59□□□□□ -0.87
SCN8A-208ENST00000599343 SPTBN1Q01082 2364 aaKnown RBP9.59□□□□□ -0.87
SCN8A-208ENST00000599343 MPDZO75970 2070 aa9.59□□□□□ -0.87
SCN8A-208ENST00000599343 H3BMM0 161 aa9.59□□□□□ -0.87
SCN8A-208ENST00000599343 LYPD1Q8N2G4 141 aa9.59□□□□□ -0.87
SCN8A-208ENST00000599343 UBE2WQ96B02 151 aa9.59□□□□□ -0.87
SCN8A-208ENST00000599343 NTN3O00634 580 aaPredicted RBP9.59□□□□□ -0.87
SCN8A-208ENST00000599343 DEFB131AP59861 70 aa9.59□□□□□ -0.87
SCN8A-208ENST00000599343 NYNRINQ9P2P1 1898 aaKnown RBP9.59□□□□□ -0.87
SCN8A-208ENST00000599343 GAGE12JA6NER3 117 aa9.59□□□□□ -0.87
SCN8A-208ENST00000599343 CD59P13987 128 aa9.59□□□□□ -0.87
SCN8A-208ENST00000599343 QRFPP83859 136 aa9.59□□□□□ -0.87
SCN8A-208ENST00000599343 GAGE1Q13065 139 aa9.59□□□□□ -0.87
SCN8A-208ENST00000599343 GAGE4Q13068 117 aa9.59□□□□□ -0.87
SCN8A-208ENST00000599343 GAGE5Q13069 117 aa9.59□□□□□ -0.87
SCN8A-208ENST00000599343 PMVKQ15126 192 aa9.59□□□□□ -0.87
SCN8A-208ENST00000599343 KLK9Q9UKQ9 250 aa9.59□□□□□ -0.87
SCN8A-208ENST00000599343 THSD7AQ9UPZ6 1657 aa9.58□□□□□ -0.88
SCN8A-208ENST00000599343 B4DSR2 109 aa9.58□□□□□ -0.88
SCN8A-208ENST00000599343 M0R1W7 72 aa9.58□□□□□ -0.88
SCN8A-208ENST00000599343 PFN2P35080 140 aa9.58□□□□□ -0.88
SCN8A-208ENST00000599343 USMG5Q96IX5 58 aa9.58□□□□□ -0.88
SCN8A-208ENST00000599343 SNHG12Q9BXW3 62 aa9.58□□□□□ -0.88
SCN8A-208ENST00000599343 OOSP1A8MZH6 123 aa9.58□□□□□ -0.88
SCN8A-208ENST00000599343 TRPT1Q86TN4 253 aaKnown RBP9.58□□□□□ -0.88
SCN8A-208ENST00000599343 RUSC1-AS1Q66K80 236 aa9.58□□□□□ -0.88
SCN8A-208ENST00000599343 TMEM190Q8WZ59 177 aa9.58□□□□□ -0.88
SCN8A-208ENST00000599343 SHANK2-AS3Q9BTD1 123 aa9.58□□□□□ -0.88
SCN8A-208ENST00000599343 SLC25A16P16260 332 aa9.57□□□□□ -0.88
SCN8A-208ENST00000599343 SPTBN2O15020 2390 aa9.57□□□□□ -0.88
SCN8A-208ENST00000599343 RBMY1FQ15415 496 aaKnown RBP9.57□□□□□ -0.88
SCN8A-208ENST00000599343 RSPO3Q9BXY4 272 aaPredicted RBP9.57□□□□□ -0.88
SCN8A-208ENST00000599343 XCL2Q9UBD3 114 aa9.57□□□□□ -0.88
SCN8A-208ENST00000599343 KIF26BQ2KJY2 2108 aa9.57□□□□□ -0.88
SCN8A-208ENST00000599343 TRAV26-2A0A0B4J265 109 aa9.57□□□□□ -0.88
SCN8A-208ENST00000599343 SAA4P35542 130 aa9.57□□□□□ -0.88
SCN8A-208ENST00000599343 SOCS3O14543 225 aa9.57□□□□□ -0.88
SCN8A-208ENST00000599343 MORN5Q5VZ52 161 aa9.57□□□□□ -0.88
SCN8A-208ENST00000599343 GFRA4Q9GZZ7 299 aa9.57□□□□□ -0.88
SCN8A-208ENST00000599343 TRBV6-6A0A0A6YYG2 114 aa9.56□□□□□ -0.88
SCN8A-208ENST00000599343 CSRP1P21291 193 aaKnown RBP9.56□□□□□ -0.88
SCN8A-208ENST00000599343 C1QTNF4Q9BXJ3 329 aa9.56□□□□□ -0.88
SCN8A-208ENST00000599343 DAZ1Q9NQZ3 744 aaKnown RBP9.56□□□□□ -0.88
SCN8A-208ENST00000599343 ABCA1O95477 2261 aa9.56□□□□□ -0.88
SCN8A-208ENST00000599343 SPINK13Q1W4C9 94 aa9.56□□□□□ -0.88
SCN8A-208ENST00000599343 MRAPQ8TCY5 172 aa9.56□□□□□ -0.88
SCN8A-208ENST00000599343 ABCA7Q8IZY2 2146 aa9.56□□□□□ -0.88
SCN8A-208ENST00000599343 A0A1W2PPI3 338 aa9.56□□□□□ -0.88
SCN8A-208ENST00000599343 DOCK3Q8IZD9 2030 aa9.56□□□□□ -0.88
SCN8A-208ENST00000599343 PLXNA1Q9UIW2 1896 aa9.56□□□□□ -0.88
SCN8A-208ENST00000599343 CYYR1Q96J86 154 aa9.56□□□□□ -0.88
SCN8A-208ENST00000599343 LRRC37AA6NMS7 1700 aa9.56□□□□□ -0.88
SCN8A-208ENST00000599343 BPESC1Q9GZL8 116 aa9.56□□□□□ -0.88
SCN8A-208ENST00000599343 SCN10AQ9Y5Y9 1956 aa9.55□□□□□ -0.88
SCN8A-208ENST00000599343 IGHV3-38A0A0C4DH36 116 aa9.55□□□□□ -0.88
SCN8A-208ENST00000599343 C9JQL5 133 aa9.55□□□□□ -0.88
SCN8A-208ENST00000599343 LYL1P12980 280 aa9.55□□□□□ -0.88
SCN8A-208ENST00000599343 HS3ST6Q96QI5 342 aa9.55□□□□□ -0.88
SCN8A-208ENST00000599343 C18orf32Q8TCD1 76 aa9.55□□□□□ -0.88
SCN8A-208ENST00000599343 TMEM126AQ9H061 195 aa9.55□□□□□ -0.88
SCN8A-208ENST00000599343 TMEM75Q8N9X5 138 aa9.55□□□□□ -0.88
SCN8A-208ENST00000599343 TRAV25A0A0B4J276 109 aa9.55□□□□□ -0.88
SCN8A-208ENST00000599343 ZNF561-AS1K7EIQ3 104 aa9.55□□□□□ -0.88
SCN8A-208ENST00000599343 NEGR1Q7Z3B1 354 aa9.55□□□□□ -0.88
SCN8A-208ENST00000599343 TSSC4Q9Y5U2 329 aaPredicted RBP9.55□□□□□ -0.88
SCN8A-208ENST00000599343 TP53BP1Q12888 1972 aaPredicted RBP9.55□□□□□ -0.88
SCN8A-208ENST00000599343 BRCA1P38398 1863 aaKnown RBP9.55□□□□□ -0.88
SCN8A-208ENST00000599343 NXPH4O95158 308 aa9.54□□□□□ -0.88
SCN8A-208ENST00000599343 C2orf66Q6UXQ4 117 aa9.54□□□□□ -0.88
SCN8A-208ENST00000599343 MRPL52Q86TS9 123 aaKnown RBP9.54□□□□□ -0.88
SCN8A-208ENST00000599343 HAPLN4Q86UW8 402 aa9.54□□□□□ -0.88
SCN8A-208ENST00000599343 RNF166Q96A37 237 aaPredicted RBP9.54□□□□□ -0.88
SCN8A-208ENST00000599343 A8MWP6 167 aa9.54□□□□□ -0.88
SCN8A-208ENST00000599343 ASPHD1Q5U4P2 390 aa9.54□□□□□ -0.88
SCN8A-208ENST00000599343 FREM3P0C091 2139 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms