RNA–Protein interactions for RNA: ENST00000599082.1

SOX2-OT-231, SOX2 overlapping transcript, human

TSL 5

Gene SOX2-OT, Length 839 nt, Biotype sense overlapping.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SOX2-OT-231	ENST00000599082	UHRF1BP1	Q6BDS2	1440 aa		1.02	□□□□□ -2.25
SOX2-OT-231	ENST00000599082	OR5AS1	Q8N127	324 aa		1.02	□□□□□ -2.25
SOX2-OT-231	ENST00000599082	ZC2HC1A	Q96GY0	325 aa		1.02	□□□□□ -2.25
SOX2-OT-231	ENST00000599082	HYLS1	Q96M11	299 aa		1.02	□□□□□ -2.25
SOX2-OT-231	ENST00000599082	ZGRF1	Q86YA3	2104 aa		1.01	□□□□□ -2.25
SOX2-OT-231	ENST00000599082	IFNA1	P01562	189 aa		1.01	□□□□□ -2.25
SOX2-OT-231	ENST00000599082	SNCB	Q16143	134 aa		1.01	□□□□□ -2.25
SOX2-OT-231	ENST00000599082	TMEM14EP	Q6UXP3	125 aa		1.01	□□□□□ -2.25
SOX2-OT-231	ENST00000599082	ARPIN	Q7Z6K5	226 aa		1.01	□□□□□ -2.25
SOX2-OT-231	ENST00000599082	GINS3	Q9BRX5	216 aa		1.01	□□□□□ -2.25
SOX2-OT-231	ENST00000599082	CACYBP	Q9HB71	228 aa	Known RBP	1.01	□□□□□ -2.25
SOX2-OT-231	ENST00000599082	ASB4	Q9Y574	426 aa		1.01	□□□□□ -2.25
SOX2-OT-231	ENST00000599082	ZNF462	Q96JM2	2506 aa		1.01	□□□□□ -2.25
SOX2-OT-231	ENST00000599082	MYH3	P11055	1940 aa		1.01	□□□□□ -2.25
SOX2-OT-231	ENST00000599082	TRPM1	Q7Z4N2	1603 aa		1	□□□□□ -2.25
SOX2-OT-231	ENST00000599082	TRAV27	A0A087WT01	109 aa		1	□□□□□ -2.25
SOX2-OT-231	ENST00000599082	IFT20	Q8IY31	132 aa		1	□□□□□ -2.25
SOX2-OT-231	ENST00000599082	PPTC7	Q8NI37	304 aa		1	□□□□□ -2.25
SOX2-OT-231	ENST00000599082		K7ERJ3	54 aa		0.99	□□□□□ -2.25
SOX2-OT-231	ENST00000599082	IFNA14	P01570	189 aa		0.99	□□□□□ -2.25
SOX2-OT-231	ENST00000599082	OGN	P20774	298 aa	Known RBP	0.99	□□□□□ -2.25
SOX2-OT-231	ENST00000599082	BASP1	P80723	227 aa	Known RBP	0.99	□□□□□ -2.25
SOX2-OT-231	ENST00000599082	RPL19	P84098	196 aa	Known RBP	0.99	□□□□□ -2.25
SOX2-OT-231	ENST00000599082	KLRD1	Q13241	179 aa		0.99	□□□□□ -2.25
SOX2-OT-231	ENST00000599082	OR13C6P	Q8NH95	151 aa		0.99	□□□□□ -2.25
SOX2-OT-231	ENST00000599082	PSMF1	Q92530	271 aa		0.99	□□□□□ -2.25
SOX2-OT-231	ENST00000599082	PBDC1	Q9BVG4	233 aa		0.99	□□□□□ -2.25
SOX2-OT-231	ENST00000599082	STOML2	Q9UJZ1	356 aa		0.99	□□□□□ -2.25
SOX2-OT-231	ENST00000599082	APOA2	P02652	100 aa		0.98	□□□□□ -2.25
SOX2-OT-231	ENST00000599082	MSMO1	Q15800	293 aa		0.98	□□□□□ -2.25
SOX2-OT-231	ENST00000599082	LINC00575	Q6W349	94 aa		0.98	□□□□□ -2.25
SOX2-OT-231	ENST00000599082	NCAPD3	P42695	1498 aa		0.98	□□□□□ -2.25
SOX2-OT-231	ENST00000599082	EIF3A	Q14152	1382 aa	Known RBP	0.97	□□□□□ -2.25
SOX2-OT-231	ENST00000599082	ODAM	A1E959	279 aa		0.97	□□□□□ -2.25
SOX2-OT-231	ENST00000599082	IGLV3-1	P01715	115 aa		0.97	□□□□□ -2.25
SOX2-OT-231	ENST00000599082	OR10AG1	Q8NH19	301 aa		0.97	□□□□□ -2.25
SOX2-OT-231	ENST00000599082	MALSU1	Q96EH3	234 aa		0.97	□□□□□ -2.25
SOX2-OT-231	ENST00000599082	ZDBF2	Q9HCK1	2354 aa		0.97	□□□□□ -2.25
SOX2-OT-231	ENST00000599082	TRAV5	A0A0B4J249	113 aa		0.96	□□□□□ -2.26
SOX2-OT-231	ENST00000599082	hDV103S1	A0JD37	113 aa		0.96	□□□□□ -2.26
SOX2-OT-231	ENST00000599082	RER1	O15258	196 aa		0.96	□□□□□ -2.26
SOX2-OT-231	ENST00000599082	MFSD11	O43934	449 aa		0.96	□□□□□ -2.26
SOX2-OT-231	ENST00000599082	IFNA4	P05014	189 aa		0.96	□□□□□ -2.26
SOX2-OT-231	ENST00000599082	TMED4	Q7Z7H5	227 aa		0.96	□□□□□ -2.26
SOX2-OT-231	ENST00000599082	AP3S1	Q92572	193 aa		0.96	□□□□□ -2.26
SOX2-OT-231	ENST00000599082	MAP1LC3B	Q9GZQ8	125 aa		0.96	□□□□□ -2.26
SOX2-OT-231	ENST00000599082	WFDC10A	Q9H1F0	79 aa		0.96	□□□□□ -2.26
SOX2-OT-231	ENST00000599082	CD109	Q6YHK3	1445 aa		0.96	□□□□□ -2.26
SOX2-OT-231	ENST00000599082	JMJD7-PLA2G4B	H0Y9G9	81 aa		0.95	□□□□□ -2.26
SOX2-OT-231	ENST00000599082	PPY	P01298	95 aa		0.95	□□□□□ -2.26
SOX2-OT-231	ENST00000599082	GNG3	P63215	75 aa		0.95	□□□□□ -2.26
SOX2-OT-231	ENST00000599082	EIF3I	Q13347	325 aa	Known RBP	0.95	□□□□□ -2.26
SOX2-OT-231	ENST00000599082	LRRC18	Q8N456	261 aa		0.95	□□□□□ -2.26
SOX2-OT-231	ENST00000599082	CAMSAP2	Q08AD1	1489 aa		0.94	□□□□□ -2.26
SOX2-OT-231	ENST00000599082	HIST1H2BK	O60814	126 aa		0.94	□□□□□ -2.26
SOX2-OT-231	ENST00000599082	CSN2	P05814	226 aa		0.94	□□□□□ -2.26
SOX2-OT-231	ENST00000599082	HIST1H2BJ	P06899	126 aa		0.94	□□□□□ -2.26
SOX2-OT-231	ENST00000599082	C1orf140	Q5VVS0	124 aa		0.94	□□□□□ -2.26
SOX2-OT-231	ENST00000599082	SMIM20	Q8N5G0	67 aa		0.94	□□□□□ -2.26
SOX2-OT-231	ENST00000599082	NUP35	Q8NFH5	326 aa		0.94	□□□□□ -2.26
SOX2-OT-231	ENST00000599082	FRMPD1	Q5SYB0	1578 aa		0.94	□□□□□ -2.26
SOX2-OT-231	ENST00000599082	MUC4	Q99102	2169 aa		0.94	□□□□□ -2.26
SOX2-OT-231	ENST00000599082	NISCH	Q9Y2I1	1504 aa		0.94	□□□□□ -2.26
SOX2-OT-231	ENST00000599082	SPTB	P11277	2137 aa		0.94	□□□□□ -2.26
SOX2-OT-231	ENST00000599082	C9orf170	A2RU37	121 aa		0.93	□□□□□ -2.26
SOX2-OT-231	ENST00000599082	PPP1R2	P41236	205 aa		0.93	□□□□□ -2.26
SOX2-OT-231	ENST00000599082	VBP1	P61758	197 aa		0.93	□□□□□ -2.26
SOX2-OT-231	ENST00000599082	POU6F1	Q14863	301 aa		0.93	□□□□□ -2.26
SOX2-OT-231	ENST00000599082	LYG2	Q86SG7	212 aa		0.93	□□□□□ -2.26
SOX2-OT-231	ENST00000599082	CDC26	Q8NHZ8	85 aa		0.93	□□□□□ -2.26
SOX2-OT-231	ENST00000599082	C5orf67	F2Z3F1	127 aa		0.92	□□□□□ -2.26
SOX2-OT-231	ENST00000599082	PIAS1	O75925	651 aa		0.92	□□□□□ -2.26
SOX2-OT-231	ENST00000599082	GLIPR1L1	Q6UWM5	242 aa		0.92	□□□□□ -2.26
SOX2-OT-231	ENST00000599082	PRRT1	Q99946	306 aa		0.92	□□□□□ -2.26
SOX2-OT-231	ENST00000599082	PTPRD	P23468	1912 aa		0.91	□□□□□ -2.26
SOX2-OT-231	ENST00000599082	TAS2R41	P59536	307 aa		0.91	□□□□□ -2.26
SOX2-OT-231	ENST00000599082	HBB	P68871	147 aa		0.91	□□□□□ -2.26
SOX2-OT-231	ENST00000599082	SPATA45	Q537H7	98 aa		0.91	□□□□□ -2.26
SOX2-OT-231	ENST00000599082	PHF5A	Q7RTV0	110 aa	Known RBP	0.91	□□□□□ -2.26
SOX2-OT-231	ENST00000599082	RTL8A	Q9BWD3	113 aa		0.91	□□□□□ -2.26
SOX2-OT-231	ENST00000599082	RNF11	Q9Y3C5	154 aa		0.91	□□□□□ -2.26
SOX2-OT-231	ENST00000599082	PIK3C2A	O00443	1686 aa		0.91	□□□□□ -2.26
SOX2-OT-231	ENST00000599082	IDO1	P14902	403 aa		0.9	□□□□□ -2.27
SOX2-OT-231	ENST00000599082	UFC1	Q9Y3C8	167 aa		0.9	□□□□□ -2.27
SOX2-OT-231	ENST00000599082	FRAS1	Q86XX4	4008 aa		0.9	□□□□□ -2.27
SOX2-OT-231	ENST00000599082	ADGB	Q8N7X0	1667 aa		0.89	□□□□□ -2.27
SOX2-OT-231	ENST00000599082	TRAV23DV6	A0A075B6W5	121 aa		0.89	□□□□□ -2.27
SOX2-OT-231	ENST00000599082	LYRM1	O43325	122 aa		0.89	□□□□□ -2.27
SOX2-OT-231	ENST00000599082	LTC4S	Q16873	150 aa		0.89	□□□□□ -2.27
SOX2-OT-231	ENST00000599082	FKBP1C	Q5VVH2	108 aa		0.89	□□□□□ -2.27
SOX2-OT-231	ENST00000599082	PLEKHB2	Q96CS7	222 aa		0.89	□□□□□ -2.27
SOX2-OT-231	ENST00000599082	C10orf95	Q9H7T3	257 aa		0.89	□□□□□ -2.27
SOX2-OT-231	ENST00000599082	ERBIN	Q96RT1	1412 aa		0.89	□□□□□ -2.27
SOX2-OT-231	ENST00000599082	GPR31	O00270	319 aa		0.88	□□□□□ -2.27
SOX2-OT-231	ENST00000599082	CIRBP	Q14011	172 aa	Known RBP	0.88	□□□□□ -2.27
SOX2-OT-231	ENST00000599082	SPATA8	Q6RVD6	105 aa		0.88	□□□□□ -2.27
SOX2-OT-231	ENST00000599082	FAM216B	Q8N7L0	139 aa		0.88	□□□□□ -2.27
SOX2-OT-231	ENST00000599082	OR10AC1	Q8NH08	325 aa		0.88	□□□□□ -2.27
SOX2-OT-231	ENST00000599082	HOPX	Q9BPY8	73 aa	Predicted RBP	0.88	□□□□□ -2.27
SOX2-OT-231	ENST00000599082	OR2H1	Q9GZK4	316 aa		0.88	□□□□□ -2.27

Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms