RNA–Protein interactions for RNA: ENST00000597928.5

USHBP1-207, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 3,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-207ENST00000597928 CKS2P33552 79 aa9.89□□□□□ -0.83
USHBP1-207ENST00000597928 PCP4P48539 62 aa9.89□□□□□ -0.83
USHBP1-207ENST00000597928 EBLN2Q6P2I7 272 aa9.89□□□□□ -0.83
USHBP1-207ENST00000597928 PSG8Q9UQ74 426 aa9.89□□□□□ -0.83
USHBP1-207ENST00000597928 ARL3P36405 182 aa9.89□□□□□ -0.83
USHBP1-207ENST00000597928 MPV17L2Q567V2 206 aa9.89□□□□□ -0.83
USHBP1-207ENST00000597928 CLEC19AQ6UXS0 136 aa9.89□□□□□ -0.83
USHBP1-207ENST00000597928 TMEM191AQ9H0A3 160 aa9.89□□□□□ -0.83
USHBP1-207ENST00000597928 NAV2Q8IVL1 2488 aa9.88□□□□□ -0.83
USHBP1-207ENST00000597928 TRBV9A0A0B4J1U6 114 aa9.88□□□□□ -0.83
USHBP1-207ENST00000597928 FCN3O75636 299 aa9.88□□□□□ -0.83
USHBP1-207ENST00000597928 IGLV2-8P01709 118 aa9.88□□□□□ -0.83
USHBP1-207ENST00000597928 CEACAM3P40198 252 aa9.88□□□□□ -0.83
USHBP1-207ENST00000597928 AARDQ4LEZ3 155 aa9.88□□□□□ -0.83
USHBP1-207ENST00000597928 RBPMS2Q6ZRY4 209 aaKnown RBP9.88□□□□□ -0.83
USHBP1-207ENST00000597928 RNF182Q8N6D2 247 aa9.88□□□□□ -0.83
USHBP1-207ENST00000597928 C8orf46Q8TAG6 207 aa9.88□□□□□ -0.83
USHBP1-207ENST00000597928 C11orf52Q96A22 123 aa9.88□□□□□ -0.83
USHBP1-207ENST00000597928 VPS25Q9BRG1 176 aa9.88□□□□□ -0.83
USHBP1-207ENST00000597928 A0A1B0GUT8 65 aa9.88□□□□□ -0.83
USHBP1-207ENST00000597928 IGKV3-20P01619 116 aa9.88□□□□□ -0.83
USHBP1-207ENST00000597928 LINC00614P0C842 121 aa9.88□□□□□ -0.83
USHBP1-207ENST00000597928 IGLL1P15814 213 aa9.88□□□□□ -0.83
USHBP1-207ENST00000597928 ERCC8Q13216 396 aa9.88□□□□□ -0.83
USHBP1-207ENST00000597928 RIGQ13278 110 aa9.88□□□□□ -0.83
USHBP1-207ENST00000597928 AMN1Q8IY45 258 aa9.88□□□□□ -0.83
USHBP1-207ENST00000597928 AP5S1Q9NUS5 200 aa9.88□□□□□ -0.83
USHBP1-207ENST00000597928 IGKV1D-37A0A075B6S9 117 aa9.88□□□□□ -0.83
USHBP1-207ENST00000597928 SHISA9B4DS77 424 aa9.88□□□□□ -0.83
USHBP1-207ENST00000597928 PDLIM4P50479 330 aa9.88□□□□□ -0.83
USHBP1-207ENST00000597928 SPENQ96T58 3664 aaKnown RBP9.88□□□□□ -0.83
USHBP1-207ENST00000597928 NBR2O15453 112 aa9.87□□□□□ -0.83
USHBP1-207ENST00000597928 COMPP49747 757 aaPredicted RBP9.87□□□□□ -0.83
USHBP1-207ENST00000597928 TCF15Q12870 199 aa9.87□□□□□ -0.83
USHBP1-207ENST00000597928 TEX36Q5VZQ5 186 aa9.87□□□□□ -0.83
USHBP1-207ENST00000597928 BEND2Q8NDZ0 799 aa9.87□□□□□ -0.83
USHBP1-207ENST00000597928 MFAP4P55083 255 aa9.87□□□□□ -0.83
USHBP1-207ENST00000597928 BRD3OSQ6XYD6 125 aa9.87□□□□□ -0.83
USHBP1-207ENST00000597928 C21orf62Q9NYP8 219 aa9.87□□□□□ -0.83
USHBP1-207ENST00000597928 M0QZK8 103 aa9.86□□□□□ -0.83
USHBP1-207ENST00000597928 Q8NA96 180 aa9.86□□□□□ -0.83
USHBP1-207ENST00000597928 NUP37Q8NFH4 326 aa9.86□□□□□ -0.83
USHBP1-207ENST00000597928 G3V318 75 aa9.86□□□□□ -0.83
USHBP1-207ENST00000597928 S100A4P26447 101 aaKnown RBP9.86□□□□□ -0.83
USHBP1-207ENST00000597928 GTSF1Q8WW33 167 aa9.86□□□□□ -0.83
USHBP1-207ENST00000597928 ALKBH7Q9BT30 221 aaPredicted RBP9.86□□□□□ -0.83
USHBP1-207ENST00000597928 SMIM27A0A1W2PRY6 76 aa9.86□□□□□ -0.83
USHBP1-207ENST00000597928 D6R8Y8 96 aa9.86□□□□□ -0.83
USHBP1-207ENST00000597928 LYZL1Q6UWQ5 148 aa9.86□□□□□ -0.83
USHBP1-207ENST00000597928 LCNL1Q6ZST4 164 aa9.86□□□□□ -0.83
USHBP1-207ENST00000597928 DLEU1O43261 78 aa9.85□□□□□ -0.83
USHBP1-207ENST00000597928 IGLV2-23P01705 113 aa9.85□□□□□ -0.83
USHBP1-207ENST00000597928 Q0VG73 95 aa9.85□□□□□ -0.83
USHBP1-207ENST00000597928 CDSNQ15517 529 aa9.85□□□□□ -0.83
USHBP1-207ENST00000597928 COX19Q49B96 90 aa9.85□□□□□ -0.83
USHBP1-207ENST00000597928 OR10J3Q5JRS4 329 aa9.85□□□□□ -0.83
USHBP1-207ENST00000597928 ARPC1AQ92747 370 aa9.85□□□□□ -0.83
USHBP1-207ENST00000597928 IFI27P40305 119 aaPredicted RBP9.85□□□□□ -0.83
USHBP1-207ENST00000597928 IGF2BP2-AS1Q96M15 143 aa9.85□□□□□ -0.83
USHBP1-207ENST00000597928 NDFIP1Q9BT67 221 aa9.85□□□□□ -0.83
USHBP1-207ENST00000597928 IGLC2P0DOY2 106 aa9.85□□□□□ -0.83
USHBP1-207ENST00000597928 IGLC3P0DOY3 106 aa9.85□□□□□ -0.83
USHBP1-207ENST00000597928 LBHQ53QV2 105 aaPredicted RBP9.85□□□□□ -0.83
USHBP1-207ENST00000597928 FAM169BQ8N8A8 192 aa9.85□□□□□ -0.83
USHBP1-207ENST00000597928 THYN1Q9P016 225 aa9.85□□□□□ -0.83
USHBP1-207ENST00000597928 VWC2LB2RUY7 222 aa9.84□□□□□ -0.83
USHBP1-207ENST00000597928 NDUFB8O95169 186 aa9.84□□□□□ -0.83
USHBP1-207ENST00000597928 IGLC1P0CG04 106 aa9.84□□□□□ -0.83
USHBP1-207ENST00000597928 POU2AF1Q16633 256 aa9.84□□□□□ -0.83
USHBP1-207ENST00000597928 SLC25A34Q6PIV7 304 aa9.84□□□□□ -0.83
USHBP1-207ENST00000597928 PRSS57Q6UWY2 283 aa9.84□□□□□ -0.83
USHBP1-207ENST00000597928 TRAV9-2A0A087WT02 112 aa9.84□□□□□ -0.83
USHBP1-207ENST00000597928 TSPOP30536 169 aa9.84□□□□□ -0.83
USHBP1-207ENST00000597928 DEFB1P60022 68 aa9.84□□□□□ -0.83
USHBP1-207ENST00000597928 SCGB2A2Q13296 93 aa9.84□□□□□ -0.83
USHBP1-207ENST00000597928 IGFL3Q6UXB1 125 aa9.84□□□□□ -0.83
USHBP1-207ENST00000597928 FMC1Q96HJ9 113 aa9.84□□□□□ -0.83
USHBP1-207ENST00000597928 PRELID3AQ96N28 172 aa9.84□□□□□ -0.83
USHBP1-207ENST00000597928 C7orf71A4D174 169 aa9.84□□□□□ -0.83
USHBP1-207ENST00000597928 CACNG7P62955 275 aa9.84□□□□□ -0.83
USHBP1-207ENST00000597928 Q86TA4 180 aa9.84□□□□□ -0.83
USHBP1-207ENST00000597928 MTORP42345 2549 aa9.83□□□□□ -0.84
USHBP1-207ENST00000597928 A0A1B0GWJ7 208 aa9.83□□□□□ -0.84
USHBP1-207ENST00000597928 VMO1Q7Z5L0 202 aa9.83□□□□□ -0.84
USHBP1-207ENST00000597928 ZNF738Q8NE65 137 aa9.83□□□□□ -0.84
USHBP1-207ENST00000597928 K7EMI3 77 aa9.83□□□□□ -0.84
USHBP1-207ENST00000597928 SCGB2A1O75556 95 aa9.83□□□□□ -0.84
USHBP1-207ENST00000597928 IGKV1-17P01599 117 aa9.83□□□□□ -0.84
USHBP1-207ENST00000597928 FAM106CPP0CH98 169 aa9.83□□□□□ -0.84
USHBP1-207ENST00000597928 CR1LQ2VPA4 569 aa9.83□□□□□ -0.84
USHBP1-207ENST00000597928 FAM106AQ4KMX7 169 aa9.83□□□□□ -0.84
USHBP1-207ENST00000597928 TEX43Q6ZNM6 134 aa9.83□□□□□ -0.84
USHBP1-207ENST00000597928 TRGV9Q99603 122 aa9.83□□□□□ -0.84
USHBP1-207ENST00000597928 PRSS47A8MTI9 375 aa9.83□□□□□ -0.84
USHBP1-207ENST00000597928 ITGB1BP1O14713 200 aa9.83□□□□□ -0.84
USHBP1-207ENST00000597928 MGPP08493 103 aa9.83□□□□□ -0.84
USHBP1-207ENST00000597928 C15orf32Q32M92 178 aa9.83□□□□□ -0.84
USHBP1-207ENST00000597928 FBLN7Q53RD9 439 aa9.83□□□□□ -0.84
USHBP1-207ENST00000597928 FAM120AOSQ5T036 256 aa9.83□□□□□ -0.84
USHBP1-207ENST00000597928 OTORQ9NRC9 128 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms