RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 ZNF726P1Q15940 193 aa9.12□□□□□ -0.95
SHKBP1-213ENST00000597325 C16orf54Q6UWD8 224 aa9.12□□□□□ -0.95
SHKBP1-213ENST00000597325 SIGLEC15Q6ZMC9 328 aa9.12□□□□□ -0.95
SHKBP1-213ENST00000597325 SSX7Q7RTT5 188 aa9.12□□□□□ -0.95
SHKBP1-213ENST00000597325 PAXXQ9BUH6 204 aa9.12□□□□□ -0.95
SHKBP1-213ENST00000597325 KMT2AQ03164 3969 aa9.11□□□□□ -0.95
SHKBP1-213ENST00000597325 A0A1B0GV50 99 aa9.11□□□□□ -0.95
SHKBP1-213ENST00000597325 HELTA6NFD8 242 aa9.11□□□□□ -0.95
SHKBP1-213ENST00000597325 RGS13O14921 159 aa9.11□□□□□ -0.95
SHKBP1-213ENST00000597325 SAP30O75446 220 aa9.11□□□□□ -0.95
SHKBP1-213ENST00000597325 EIF3GO75821 320 aaKnown RBP eCLIP9.11□□□□□ -0.95
SHKBP1-213ENST00000597325 CD5P06127 495 aa9.11□□□□□ -0.95
SHKBP1-213ENST00000597325 CSN3P07498 182 aa9.11□□□□□ -0.95
SHKBP1-213ENST00000597325 ARL14EPLP0DKL9 152 aa9.11□□□□□ -0.95
SHKBP1-213ENST00000597325 CD33P20138 364 aa9.11□□□□□ -0.95
SHKBP1-213ENST00000597325 RPL11P62913 178 aaKnown RBP9.11□□□□□ -0.95
SHKBP1-213ENST00000597325 UBE2L3P68036 154 aaKnown RBP9.11□□□□□ -0.95
SHKBP1-213ENST00000597325 IL34Q6ZMJ4 242 aa9.11□□□□□ -0.95
SHKBP1-213ENST00000597325 GLMPQ8WWB7 406 aa9.11□□□□□ -0.95
SHKBP1-213ENST00000597325 OR51M1Q9H341 326 aa9.11□□□□□ -0.95
SHKBP1-213ENST00000597325 TMEM14CQ9P0S9 112 aa9.11□□□□□ -0.95
SHKBP1-213ENST00000597325 ZNF785A8K8V0 405 aa9.1□□□□□ -0.95
SHKBP1-213ENST00000597325 OR10J4P0C629 311 aa9.1□□□□□ -0.95
SHKBP1-213ENST00000597325 GP9P14770 177 aa9.1□□□□□ -0.95
SHKBP1-213ENST00000597325 EDN2P20800 178 aa9.1□□□□□ -0.95
SHKBP1-213ENST00000597325 GCHFRP30047 84 aa9.1□□□□□ -0.95
SHKBP1-213ENST00000597325 FGF8P55075 233 aaPredicted RBP9.1□□□□□ -0.95
SHKBP1-213ENST00000597325 TCF24Q7RTU0 167 aa9.1□□□□□ -0.95
SHKBP1-213ENST00000597325 MBD3L1Q8WWY6 194 aa9.1□□□□□ -0.95
SHKBP1-213ENST00000597325 FAM167A-AS1Q96KT0 104 aa9.1□□□□□ -0.95
SHKBP1-213ENST00000597325 MCRIP2Q9BUT9 160 aaKnown RBP9.1□□□□□ -0.95
SHKBP1-213ENST00000597325 HRH4Q9H3N8 390 aa9.1□□□□□ -0.95
SHKBP1-213ENST00000597325 TMEM167BQ9NRX6 74 aa9.1□□□□□ -0.95
SHKBP1-213ENST00000597325 DNAH10Q8IVF4 4471 aa9.09□□□□□ -0.95
SHKBP1-213ENST00000597325 TRAV1-1A0A0B4J248 108 aa9.09□□□□□ -0.95
SHKBP1-213ENST00000597325 NMBP08949 121 aa9.09□□□□□ -0.95
SHKBP1-213ENST00000597325 PYYP10082 97 aa9.09□□□□□ -0.95
SHKBP1-213ENST00000597325 MEOX2P50222 304 aa9.09□□□□□ -0.95
SHKBP1-213ENST00000597325 PPT1P50897 306 aa9.09□□□□□ -0.95
SHKBP1-213ENST00000597325 GUK1Q16774 197 aa9.09□□□□□ -0.95
SHKBP1-213ENST00000597325 PCNPQ8WW12 178 aaKnown RBP9.09□□□□□ -0.95
SHKBP1-213ENST00000597325 SIGLEC8Q9NYZ4 499 aa9.09□□□□□ -0.95
SHKBP1-213ENST00000597325 MLXQ9UH92 298 aa9.09□□□□□ -0.95
SHKBP1-213ENST00000597325 IFNA1P01562 189 aa9.08□□□□□ -0.96
SHKBP1-213ENST00000597325 HIST1H1EP10412 219 aaKnown RBP9.08□□□□□ -0.96
SHKBP1-213ENST00000597325 PSMB3P49720 205 aa9.08□□□□□ -0.96
SHKBP1-213ENST00000597325 C9orf66Q5T8R8 295 aa9.08□□□□□ -0.96
SHKBP1-213ENST00000597325 RBPMS2Q6ZRY4 209 aaKnown RBP9.08□□□□□ -0.96
SHKBP1-213ENST00000597325 BLNKQ8WV28 456 aa9.08□□□□□ -0.96
SHKBP1-213ENST00000597325 FXYD5Q96DB9 178 aa9.08□□□□□ -0.96
SHKBP1-213ENST00000597325 ABCA13Q86UQ4 5058 aa9.08□□□□□ -0.96
SHKBP1-213ENST00000597325 IGKV3-7A0A075B6H7 116 aa9.07□□□□□ -0.96
SHKBP1-213ENST00000597325 A0A087X0K7 114 aa9.07□□□□□ -0.96
SHKBP1-213ENST00000597325 IGLC2P0DOY2 106 aa9.07□□□□□ -0.96
SHKBP1-213ENST00000597325 PAFAH1B2P68402 229 aa9.07□□□□□ -0.96
SHKBP1-213ENST00000597325 CLLU1Q5K131 121 aa9.07□□□□□ -0.96
SHKBP1-213ENST00000597325 SAMD13Q5VXD3 122 aa9.07□□□□□ -0.96
SHKBP1-213ENST00000597325 ADAMTSL5Q6ZMM2 481 aa9.07□□□□□ -0.96
SHKBP1-213ENST00000597325 ZNF503Q96F45 646 aa9.07□□□□□ -0.96
SHKBP1-213ENST00000597325 NRN1Q9NPD7 142 aa9.07□□□□□ -0.96
SHKBP1-213ENST00000597325 MANBALQ9NQG1 85 aa9.07□□□□□ -0.96
SHKBP1-213ENST00000597325 SELENOKQ9Y6D0 94 aa9.07□□□□□ -0.96
SHKBP1-213ENST00000597325 TRBV19A0A075B6N1 114 aa9.06□□□□□ -0.96
SHKBP1-213ENST00000597325 DNASE2O00115 360 aaPredicted RBP9.06□□□□□ -0.96
SHKBP1-213ENST00000597325 MRPS12O15235 138 aaKnown RBP9.06□□□□□ -0.96
SHKBP1-213ENST00000597325 SNRPCP09234 159 aaKnown RBP9.06□□□□□ -0.96
SHKBP1-213ENST00000597325 NBEAP1P0C6P0 100 aa9.06□□□□□ -0.96
SHKBP1-213ENST00000597325 INSL3P51460 131 aa9.06□□□□□ -0.96
SHKBP1-213ENST00000597325 PDE6HQ13956 83 aa9.06□□□□□ -0.96
SHKBP1-213ENST00000597325 DEFB114Q30KQ6 69 aa9.06□□□□□ -0.96
SHKBP1-213ENST00000597325 LCN12Q6JVE5 192 aa9.06□□□□□ -0.96
SHKBP1-213ENST00000597325 OR2K2Q8NGT1 345 aa9.06□□□□□ -0.96
SHKBP1-213ENST00000597325 SLC50A1Q9BRV3 221 aa9.06□□□□□ -0.96
SHKBP1-213ENST00000597325 GPR61Q9BZJ8 451 aa9.06□□□□□ -0.96
SHKBP1-213ENST00000597325 TMPRSS5Q9H3S3 457 aa9.06□□□□□ -0.96
SHKBP1-213ENST00000597325 GNG13Q9P2W3 67 aa9.06□□□□□ -0.96
SHKBP1-213ENST00000597325 TRAV25A0A0B4J276 109 aa9.05□□□□□ -0.96
SHKBP1-213ENST00000597325 H3BQ15 152 aa9.05□□□□□ -0.96
SHKBP1-213ENST00000597325 H3BTX0 84 aa9.05□□□□□ -0.96
SHKBP1-213ENST00000597325 TAGLN2P37802 199 aaKnown RBP9.05□□□□□ -0.96
SHKBP1-213ENST00000597325 UBE2G2P60604 165 aa9.05□□□□□ -0.96
SHKBP1-213ENST00000597325 PSG9Q00887 426 aa9.05□□□□□ -0.96
SHKBP1-213ENST00000597325 CD300EQ496F6 205 aaPredicted RBP9.05□□□□□ -0.96
SHKBP1-213ENST00000597325 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.05□□□□□ -0.96
SHKBP1-213ENST00000597325 TMEM61Q8N0U2 210 aa9.05□□□□□ -0.96
SHKBP1-213ENST00000597325 GBGT1Q8N5D6 347 aa9.05□□□□□ -0.96
SHKBP1-213ENST00000597325 LYPD6BQ8NI32 183 aa9.05□□□□□ -0.96
SHKBP1-213ENST00000597325 MS4A6AQ9H2W1 248 aa9.05□□□□□ -0.96
SHKBP1-213ENST00000597325 AAMDCQ9H7C9 122 aa9.05□□□□□ -0.96
SHKBP1-213ENST00000597325 ZNF586Q9NXT0 402 aa9.05□□□□□ -0.96
SHKBP1-213ENST00000597325 SMAD5-AS1Q9Y6J3 95 aa9.05□□□□□ -0.96
SHKBP1-213ENST00000597325 TSPAN4O14817 238 aa9.04□□□□□ -0.96
SHKBP1-213ENST00000597325 ZNF253O75346 499 aa9.04□□□□□ -0.96
SHKBP1-213ENST00000597325 IGLV1-51P01701 117 aa9.04□□□□□ -0.96
SHKBP1-213ENST00000597325 ID1P41134 155 aa9.04□□□□□ -0.96
SHKBP1-213ENST00000597325 TFPI2P48307 235 aa9.04□□□□□ -0.96
SHKBP1-213ENST00000597325 CCL20P78556 96 aa9.04□□□□□ -0.96
SHKBP1-213ENST00000597325 GUCA2BQ16661 112 aa9.04□□□□□ -0.96
SHKBP1-213ENST00000597325 FAM90A2PQ658T7 463 aa9.04□□□□□ -0.96
SHKBP1-213ENST00000597325 SUN5Q8TC36 379 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms