RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 NBEAQ8NFP9 2946 aa4.28□□□□□ -1.72
VMP1-215ENST00000592619 SPTBN2O15020 2390 aa4.28□□□□□ -1.72
VMP1-215ENST00000592619 MDC1Q14676 2089 aaKnown RBP4.28□□□□□ -1.72
VMP1-215ENST00000592619 ITPR1Q14643 2758 aa4.28□□□□□ -1.72
VMP1-215ENST00000592619 KMT2BQ9UMN6 2715 aaPredicted RBP4.28□□□□□ -1.72
VMP1-215ENST00000592619 IGLV3-12A0A075B6K2 115 aa4.28□□□□□ -1.72
VMP1-215ENST00000592619 ARRDC5A6NEK1 342 aa4.28□□□□□ -1.72
VMP1-215ENST00000592619 BBIP1A8MTZ0 92 aa4.28□□□□□ -1.72
VMP1-215ENST00000592619 NCBP2P52298 156 aaKnown RBP eCLIP4.28□□□□□ -1.729e-9■□□□□ 10.2
VMP1-215ENST00000592619 ZNF138P52744 262 aa4.28□□□□□ -1.72
VMP1-215ENST00000592619 SYNJ2BPP57105 145 aa4.28□□□□□ -1.72
VMP1-215ENST00000592619 DEFA3P59666 94 aa4.28□□□□□ -1.72
VMP1-215ENST00000592619 REG3AQ06141 175 aa4.28□□□□□ -1.72
VMP1-215ENST00000592619 RTL8BQ17RB0 113 aa4.28□□□□□ -1.72
VMP1-215ENST00000592619 VMA21Q3ZAQ7 101 aa4.28□□□□□ -1.72
VMP1-215ENST00000592619 MEIG1Q5JSS6 88 aa4.28□□□□□ -1.72
VMP1-215ENST00000592619 ZNF678Q5SXM1 525 aa4.28□□□□□ -1.72
VMP1-215ENST00000592619 ZNF773Q6PK81 442 aa4.28□□□□□ -1.72
VMP1-215ENST00000592619 FAM19A3Q7Z5A8 133 aa4.28□□□□□ -1.72
VMP1-215ENST00000592619 CAMK2N1Q7Z7J9 78 aa4.28□□□□□ -1.72
VMP1-215ENST00000592619 RXFP4Q8TDU9 374 aa4.28□□□□□ -1.72
VMP1-215ENST00000592619 C2orf50Q96LR7 162 aa4.28□□□□□ -1.72
VMP1-215ENST00000592619 DERL1Q9BUN8 251 aa4.28□□□□□ -1.72
VMP1-215ENST00000592619 GABARAPL3Q9BY60 117 aa4.28□□□□□ -1.72
VMP1-215ENST00000592619 MRPL20Q9BYC9 149 aaKnown RBP4.28□□□□□ -1.72
VMP1-215ENST00000592619 PRO1933Q9H354 126 aa4.28□□□□□ -1.72
VMP1-215ENST00000592619 CCDC167Q9P0B6 97 aa4.28□□□□□ -1.72
VMP1-215ENST00000592619 MPC1Q9Y5U8 109 aa4.28□□□□□ -1.72
VMP1-215ENST00000592619 ATMQ13315 3056 aa4.28□□□□□ -1.72
VMP1-215ENST00000592619 SPENQ96T58 3664 aaKnown RBP4.28□□□□□ -1.72
VMP1-215ENST00000592619 ANKRD12Q6UB98 2062 aa4.28□□□□□ -1.72
VMP1-215ENST00000592619 CHD8Q9HCK8 2581 aa4.27□□□□□ -1.73
VMP1-215ENST00000592619 CYSRT1A8MQ03 144 aa4.27□□□□□ -1.73
VMP1-215ENST00000592619 KLF7O75840 302 aaPredicted RBP4.27□□□□□ -1.73
VMP1-215ENST00000592619 KRASP01116 189 aa4.27□□□□□ -1.73
VMP1-215ENST00000592619 MT-ND4LP03901 98 aa4.27□□□□□ -1.73
VMP1-215ENST00000592619 IL7P13232 177 aa4.27□□□□□ -1.73
VMP1-215ENST00000592619 CRYGSP22914 178 aa4.27□□□□□ -1.73
VMP1-215ENST00000592619 OPRK1P41145 380 aa4.27□□□□□ -1.73
VMP1-215ENST00000592619 TPPP2P59282 170 aa4.27□□□□□ -1.73
VMP1-215ENST00000592619 HERVK_113P63121 156 aa4.27□□□□□ -1.73
VMP1-215ENST00000592619 HOXC5Q00444 222 aa4.27□□□□□ -1.73
VMP1-215ENST00000592619 MSMO1Q15800 293 aa4.27□□□□□ -1.73
VMP1-215ENST00000592619 SHISA6Q6ZSJ9 500 aa4.27□□□□□ -1.73
VMP1-215ENST00000592619 WDR86Q86TI4 376 aa4.27□□□□□ -1.73
VMP1-215ENST00000592619 MSRB3Q8IXL7 192 aa4.27□□□□□ -1.73
VMP1-215ENST00000592619 TTC9CQ8N5M4 171 aa4.27□□□□□ -1.73
VMP1-215ENST00000592619 DRAM1Q8N682 238 aa4.27□□□□□ -1.73
VMP1-215ENST00000592619 MS4A6EQ96DS6 147 aa4.27□□□□□ -1.73
VMP1-215ENST00000592619 BORCS8Q96FH0 119 aa4.27□□□□□ -1.73
VMP1-215ENST00000592619 F11RQ9Y624 299 aaKnown RBP4.27□□□□□ -1.73
VMP1-215ENST00000592619 USP24Q9UPU5 2620 aa4.27□□□□□ -1.73
VMP1-215ENST00000592619 KNTC1P50748 2209 aa4.27□□□□□ -1.73
VMP1-215ENST00000592619 DSPP15924 2871 aaKnown RBP4.27□□□□□ -1.73
VMP1-215ENST00000592619 IGF2RP11717 2491 aa4.26□□□□□ -1.73
VMP1-215ENST00000592619 SMIM26A0A096LP01 95 aa4.26□□□□□ -1.73
VMP1-215ENST00000592619 GABARAPH6UMI1 98 aa4.26□□□□□ -1.73
VMP1-215ENST00000592619 LYZL6O75951 148 aa4.26□□□□□ -1.73
VMP1-215ENST00000592619 TMBIM6P55061 237 aa4.26□□□□□ -1.73
VMP1-215ENST00000592619 RBM11P57052 281 aaKnown RBP4.26□□□□□ -1.73
VMP1-215ENST00000592619 LINC00303Q3SY05 128 aa4.26□□□□□ -1.73
VMP1-215ENST00000592619 DEFB134Q4QY38 66 aa4.26□□□□□ -1.73
VMP1-215ENST00000592619 ZNF880Q6PDB4 577 aa4.26□□□□□ -1.73
VMP1-215ENST00000592619 Q6ZS49 121 aa4.26□□□□□ -1.73
VMP1-215ENST00000592619 LINC00173Q6ZV60 143 aa4.26□□□□□ -1.73
VMP1-215ENST00000592619 MKXQ8IYA7 352 aa4.26□□□□□ -1.73
VMP1-215ENST00000592619 RNF175Q8N4F7 328 aa4.26□□□□□ -1.73
VMP1-215ENST00000592619 OR5D14Q8NGL3 314 aa4.26□□□□□ -1.73
VMP1-215ENST00000592619 RTN4IP1Q8WWV3 396 aaPredicted RBP4.26□□□□□ -1.73
VMP1-215ENST00000592619 LINC00052Q96N35 136 aa4.26□□□□□ -1.73
VMP1-215ENST00000592619 SAR1AQ9NR31 198 aa4.26□□□□□ -1.73
VMP1-215ENST00000592619 OTORQ9NRC9 128 aa4.26□□□□□ -1.73
VMP1-215ENST00000592619 AK3Q9UIJ7 227 aa4.26□□□□□ -1.73
VMP1-215ENST00000592619 RNF11Q9Y3C5 154 aa4.26□□□□□ -1.73
VMP1-215ENST00000592619 SMG1Q96Q15 3661 aaKnown RBP4.26□□□□□ -1.73
VMP1-215ENST00000592619 ANKRD11Q6UB99 2663 aaPredicted RBP4.26□□□□□ -1.73
VMP1-215ENST00000592619 ACACBO00763 2458 aa4.26□□□□□ -1.73
VMP1-215ENST00000592619 TRBV7-6A0A0J9YX20 115 aa4.25□□□□□ -1.73
VMP1-215ENST00000592619 C7orf71A4D174 169 aa4.25□□□□□ -1.73
VMP1-215ENST00000592619 C4orf51C9J302 202 aa4.25□□□□□ -1.73
VMP1-215ENST00000592619 FNDC10F2Z333 226 aa4.25□□□□□ -1.73
VMP1-215ENST00000592619 DEDDO75618 318 aa4.25□□□□□ -1.73
VMP1-215ENST00000592619 FSTL3O95633 263 aa4.25□□□□□ -1.73
VMP1-215ENST00000592619 APC2O95996 2303 aa4.25□□□□□ -1.73
VMP1-215ENST00000592619 STATHP02808 62 aa4.25□□□□□ -1.73
VMP1-215ENST00000592619 BGLAPP02818 100 aa4.25□□□□□ -1.73
VMP1-215ENST00000592619 CD14P08571 375 aa4.25□□□□□ -1.73
VMP1-215ENST00000592619 SSR2P43308 183 aa4.25□□□□□ -1.73
VMP1-215ENST00000592619 MAP1BP46821 2468 aaKnown RBP4.25□□□□□ -1.73
VMP1-215ENST00000592619 INPP1P49441 399 aa4.25□□□□□ -1.73
VMP1-215ENST00000592619 PLGLB1Q02325 96 aa4.25□□□□□ -1.73
VMP1-215ENST00000592619 UBE2NLQ5JXB2 153 aa4.25□□□□□ -1.73
VMP1-215ENST00000592619 C1orf140Q5VVS0 124 aa4.25□□□□□ -1.73
VMP1-215ENST00000592619 NXNL2Q5VZ03 156 aa4.25□□□□□ -1.73
VMP1-215ENST00000592619 LCN15Q6UWW0 184 aa4.25□□□□□ -1.73
VMP1-215ENST00000592619 AMTNQ6UX39 209 aa4.25□□□□□ -1.73
VMP1-215ENST00000592619 KTN1-AS1Q86SY8 53 aa4.25□□□□□ -1.73
VMP1-215ENST00000592619 SLC22A24Q8N4F4 322 aa4.25□□□□□ -1.73
VMP1-215ENST00000592619 YIPF7Q8N8F6 280 aa4.25□□□□□ -1.73
VMP1-215ENST00000592619 ZNF721Q8TF20 911 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms