RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 MAJINQ3KP22 176 aa13.7□□□□□ -0.22
SMARCA4-215ENST00000590574 RAXQ9Y2V3 346 aa13.7□□□□□ -0.22
SMARCA4-215ENST00000590574 UBE2V1Q13404 147 aa13.7□□□□□ -0.22
SMARCA4-215ENST00000590574 TDRG1Q3Y452 100 aa13.7□□□□□ -0.22
SMARCA4-215ENST00000590574 GLMPQ8WWB7 406 aa13.7□□□□□ -0.22
SMARCA4-215ENST00000590574 KIR2DL4Q99706 377 aa13.7□□□□□ -0.22
SMARCA4-215ENST00000590574 LINC00527Q9UJ94 153 aa13.7□□□□□ -0.22
SMARCA4-215ENST00000590574 IGHV1-24A0A0C4DH33 117 aa13.7□□□□□ -0.22
SMARCA4-215ENST00000590574 FAM231BA6NCW3 169 aa13.7□□□□□ -0.22
SMARCA4-215ENST00000590574 SRSF8Q9BRL6 282 aaKnown RBP13.7□□□□□ -0.22
SMARCA4-215ENST00000590574 SEC11AP67812 179 aa13.7□□□□□ -0.22
SMARCA4-215ENST00000590574 ZNF56Q15929 161 aa13.7□□□□□ -0.22
SMARCA4-215ENST00000590574 CACNA1GO43497 2377 aa13.7□□□□□ -0.22
SMARCA4-215ENST00000590574 DPM2O94777 84 aa13.7□□□□□ -0.22
SMARCA4-215ENST00000590574 CCL19Q99731 98 aa13.7□□□□□ -0.22
SMARCA4-215ENST00000590574 M0R1W7 72 aa13.69□□□□□ -0.22
SMARCA4-215ENST00000590574 IGLL1P15814 213 aa13.69□□□□□ -0.22
SMARCA4-215ENST00000590574 COX11Q9Y6N1 276 aa13.69□□□□□ -0.22
SMARCA4-215ENST00000590574 TMEM213A2RRL7 107 aa13.69□□□□□ -0.22
SMARCA4-215ENST00000590574 H7C2G1 150 aa13.69□□□□□ -0.22
SMARCA4-215ENST00000590574 IGKCP01834 107 aa13.69□□□□□ -0.22
SMARCA4-215ENST00000590574 MSMPQ1L6U9 139 aa13.69□□□□□ -0.22
SMARCA4-215ENST00000590574 DAZAP2Q15038 168 aaPredicted RBP13.69□□□□□ -0.22
SMARCA4-215ENST00000590574 PSMG4Q5JS54 123 aa13.69□□□□□ -0.22
SMARCA4-215ENST00000590574 PIP4P1Q86T03 277 aa13.69□□□□□ -0.22
SMARCA4-215ENST00000590574 JKAMPQ9P055 326 aa13.69□□□□□ -0.22
SMARCA4-215ENST00000590574 NAA38Q9BRA0 125 aaKnown RBP13.69□□□□□ -0.22
SMARCA4-215ENST00000590574 EML5Q05BV3 1969 aa13.68□□□□□ -0.22
SMARCA4-215ENST00000590574 HSD52Q0P140 79 aa13.68□□□□□ -0.22
SMARCA4-215ENST00000590574 CTSZQ9UBR2 303 aa13.68□□□□□ -0.22
SMARCA4-215ENST00000590574 FRMD6-AS1P0C7T7 363 aa13.68□□□□□ -0.22
SMARCA4-215ENST00000590574 LGALS3P17931 250 aaKnown RBP13.68□□□□□ -0.22
SMARCA4-215ENST00000590574 SRSF1Q07955 248 aaKnown RBP eCLIP13.68□□□□□ -0.22
SMARCA4-215ENST00000590574 NHP2Q9NX24 153 aaKnown RBP13.68□□□□□ -0.22
SMARCA4-215ENST00000590574 IGLC7A0M8Q6 106 aa13.67□□□□□ -0.22
SMARCA4-215ENST00000590574 IGF2BP2-AS1Q96M15 143 aa13.67□□□□□ -0.22
SMARCA4-215ENST00000590574 SIGLEC15Q6ZMC9 328 aa13.67□□□□□ -0.22
SMARCA4-215ENST00000590574 IGKV1OR2-108A0A075B7D4 117 aa13.67□□□□□ -0.22
SMARCA4-215ENST00000590574 HAX1O00165 279 aa13.67□□□□□ -0.22
SMARCA4-215ENST00000590574 LTAP01374 205 aa13.67□□□□□ -0.22
SMARCA4-215ENST00000590574 IGLC1P0CG04 106 aa13.67□□□□□ -0.22
SMARCA4-215ENST00000590574 MINOS1Q5TGZ0 78 aa13.67□□□□□ -0.22
SMARCA4-215ENST00000590574 MINOS1-NBL1R4GNA1 71 aa13.67□□□□□ -0.22
SMARCA4-215ENST00000590574 CEP192Q8TEP8 1941 aa13.67□□□□□ -0.22
SMARCA4-215ENST00000590574 K7EM74 188 aa13.67□□□□□ -0.22
SMARCA4-215ENST00000590574 PROP1O75360 226 aa13.67□□□□□ -0.22
SMARCA4-215ENST00000590574 PDE6HQ13956 83 aa13.67□□□□□ -0.22
SMARCA4-215ENST00000590574 WIPF2Q8TF74 440 aaPredicted RBP13.67□□□□□ -0.22
SMARCA4-215ENST00000590574 TMEM14CQ9P0S9 112 aa13.67□□□□□ -0.22
SMARCA4-215ENST00000590574 ERCC8Q13216 396 aa13.66□□□□□ -0.22
SMARCA4-215ENST00000590574 DYNLRB2Q8TF09 96 aa13.66□□□□□ -0.22
SMARCA4-215ENST00000590574 SELENOKQ9Y6D0 94 aa13.66□□□□□ -0.22
SMARCA4-215ENST00000590574 RPL13AP40429 203 aaKnown RBP13.66□□□□□ -0.22
SMARCA4-215ENST00000590574 SEM1Q6ZVN7 128 aa13.66□□□□□ -0.22
SMARCA4-215ENST00000590574 ZC2HC1AQ96GY0 325 aa13.66□□□□□ -0.22
SMARCA4-215ENST00000590574 PAX8Q06710 450 aa13.66□□□□□ -0.22
SMARCA4-215ENST00000590574 EIF4EBP1Q13541 118 aaPredicted RBP13.66□□□□□ -0.22
SMARCA4-215ENST00000590574 TMEM219Q86XT9 240 aa13.66□□□□□ -0.22
SMARCA4-215ENST00000590574 RITA1Q96K30 269 aa13.66□□□□□ -0.22
SMARCA4-215ENST00000590574 RIF1Q5UIP0 2472 aaKnown RBP13.66□□□□□ -0.22
SMARCA4-215ENST00000590574 TMEM170BQ5T4T1 132 aa13.66□□□□□ -0.22
SMARCA4-215ENST00000590574 GTSCR1Q86UQ5 136 aa13.66□□□□□ -0.22
SMARCA4-215ENST00000590574 OR9G4Q8NGQ1 327 aa13.66□□□□□ -0.22
SMARCA4-215ENST00000590574 CPAMD8Q8IZJ3 1885 aa13.66□□□□□ -0.22
SMARCA4-215ENST00000590574 OOSP1A8MZH6 123 aa13.65□□□□□ -0.22
SMARCA4-215ENST00000590574 PATE2Q6UY27 113 aa13.65□□□□□ -0.22
SMARCA4-215ENST00000590574 H3BRN7 92 aa13.65□□□□□ -0.22
SMARCA4-215ENST00000590574 SNRPD3P62318 126 aaKnown RBP13.65□□□□□ -0.22
SMARCA4-215ENST00000590574 NDPQ00604 133 aa13.65□□□□□ -0.22
SMARCA4-215ENST00000590574 UTF1Q5T230 341 aa13.65□□□□□ -0.22
SMARCA4-215ENST00000590574 PRTN3P24158 256 aa13.65□□□□□ -0.22
SMARCA4-215ENST00000590574 MRPL16Q9NX20 251 aaKnown RBP13.65□□□□□ -0.22
SMARCA4-215ENST00000590574 MED13Q9UHV7 2174 aa13.65□□□□□ -0.22
SMARCA4-215ENST00000590574 PPP1R17O96001 155 aa13.64□□□□□ -0.23
SMARCA4-215ENST00000590574 STPG4Q8N801 248 aa13.64□□□□□ -0.23
SMARCA4-215ENST00000590574 ZNF562Q6V9R5 426 aa13.64□□□□□ -0.23
SMARCA4-215ENST00000590574 USF3Q68DE3 2245 aa13.64□□□□□ -0.23
SMARCA4-215ENST00000590574 TRAV21A0A0B4J279 112 aa13.64□□□□□ -0.23
SMARCA4-215ENST00000590574 NDUFB8O95169 186 aa13.64□□□□□ -0.23
SMARCA4-215ENST00000590574 ARL6IP6Q8N6S5 226 aa13.64□□□□□ -0.23
SMARCA4-215ENST00000590574 A0A0G2JLM5 398 aa13.64□□□□□ -0.23
SMARCA4-215ENST00000590574 LAGE3Q14657 143 aa13.64□□□□□ -0.23
SMARCA4-215ENST00000590574 FAM167A-AS1Q96KT0 104 aa13.64□□□□□ -0.23
SMARCA4-215ENST00000590574 C17orf77Q96MU5 243 aa13.64□□□□□ -0.23
SMARCA4-215ENST00000590574 GTF3C1Q12789 2109 aa13.64□□□□□ -0.23
SMARCA4-215ENST00000590574 CR1LQ2VPA4 569 aa13.63□□□□□ -0.23
SMARCA4-215ENST00000590574 OR2K2Q8NGT1 345 aa13.63□□□□□ -0.23
SMARCA4-215ENST00000590574 KAAG1Q9UBP8 84 aa13.63□□□□□ -0.23
SMARCA4-215ENST00000590574 TRAV41A0A0B4J266 112 aa13.63□□□□□ -0.23
SMARCA4-215ENST00000590574 PAX1P15863 534 aa13.63□□□□□ -0.23
SMARCA4-215ENST00000590574 KLF5Q13887 457 aaPredicted RBP13.63□□□□□ -0.23
SMARCA4-215ENST00000590574 C8orf31Q8N9H6 132 aa13.63□□□□□ -0.23
SMARCA4-215ENST00000590574 ACACAQ13085 2346 aa13.63□□□□□ -0.23
SMARCA4-215ENST00000590574 C7orf69Q9H7B7 122 aa13.63□□□□□ -0.23
SMARCA4-215ENST00000590574 MED12LQ86YW9 2145 aa13.63□□□□□ -0.23
SMARCA4-215ENST00000590574 FAM104BQ5XKR9 115 aa13.63□□□□□ -0.23
SMARCA4-215ENST00000590574 CEACAM4O75871 244 aa13.62□□□□□ -0.23
SMARCA4-215ENST00000590574 CHD3Q12873 2000 aaKnown RBP13.62□□□□□ -0.23
SMARCA4-215ENST00000590574 E7EUB6 86 aa13.62□□□□□ -0.23
SMARCA4-215ENST00000590574 RNF182Q8N6D2 247 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms