RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 IGHV4-39P01824 125 aa14.97□□□□□ -0.01
PRKCSH-209ENST00000589838 FOXA3P55318 350 aaPredicted RBP14.97□□□□□ -0.01
PRKCSH-209ENST00000589838 TEX43Q6ZNM6 134 aa14.97□□□□□ -0.01
PRKCSH-209ENST00000589838 PIMREGQ9BSJ6 248 aa14.97□□□□□ -0.01
PRKCSH-209ENST00000589838 WNK2Q9Y3S1 2297 aa14.97□□□□□ -0.01
PRKCSH-209ENST00000589838 PMCHP20382 165 aa14.97□□□□□ -0.01
PRKCSH-209ENST00000589838 RAB9AP51151 201 aa14.97□□□□□ -0.01
PRKCSH-209ENST00000589838 DCHS2Q6V1P9 2916 aa14.97□□□□□ -0.01
PRKCSH-209ENST00000589838 ZZEF1O43149 2961 aa14.96□□□□□ -0.01
PRKCSH-209ENST00000589838 KIR2DL5BA0A0G2JN68 375 aa14.96□□□□□ -0.01
PRKCSH-209ENST00000589838 KIR2DL5BA0A0G2JPC4 375 aa14.96□□□□□ -0.01
PRKCSH-209ENST00000589838 PAX8Q06710 450 aa14.96□□□□□ -0.01
PRKCSH-209ENST00000589838 ECSCRQ19T08 205 aa14.96□□□□□ -0.01
PRKCSH-209ENST00000589838 LBHQ53QV2 105 aaPredicted RBP14.96□□□□□ -0.01
PRKCSH-209ENST00000589838 KIR2DL5AQ8N109 375 aa14.96□□□□□ -0.01
PRKCSH-209ENST00000589838 ZNF502Q8TBZ5 544 aa14.96□□□□□ -0.01
PRKCSH-209ENST00000589838 ZC2HC1AQ96GY0 325 aa14.96□□□□□ -0.01
PRKCSH-209ENST00000589838 SSBP4Q9BWG4 385 aaPredicted RBP14.96□□□□□ -0.01
PRKCSH-209ENST00000589838 HAX1O00165 279 aa14.95□□□□□ -0.02
PRKCSH-209ENST00000589838 ATP6V0E1O15342 81 aa14.95□□□□□ -0.02
PRKCSH-209ENST00000589838 CT45A10P0DMU9 189 aa14.95□□□□□ -0.02
PRKCSH-209ENST00000589838 BCL6BQ8N143 479 aaPredicted RBP14.95□□□□□ -0.02
PRKCSH-209ENST00000589838 BORCS7Q96B45 105 aa14.95□□□□□ -0.02
PRKCSH-209ENST00000589838 CHEK1O14757 476 aa14.95□□□□□ -0.02
PRKCSH-209ENST00000589838 KRTDAPP60985 99 aa14.95□□□□□ -0.02
PRKCSH-209ENST00000589838 RHOGP84095 191 aa14.95□□□□□ -0.02
PRKCSH-209ENST00000589838 C15orf32Q32M92 178 aa14.95□□□□□ -0.02
PRKCSH-209ENST00000589838 A0A1B0GW15 77 aa14.94□□□□□ -0.02
PRKCSH-209ENST00000589838 CD33P20138 364 aa14.94□□□□□ -0.02
PRKCSH-209ENST00000589838 Q6AWC8 147 aa14.94□□□□□ -0.02
PRKCSH-209ENST00000589838 PIP4P2Q8N4L2 257 aa14.94□□□□□ -0.02
PRKCSH-209ENST00000589838 M0R3E3 92 aa14.93□□□□□ -0.02
PRKCSH-209ENST00000589838 NDUFS8O00217 210 aa14.93□□□□□ -0.02
PRKCSH-209ENST00000589838 HSBP1O75506 76 aa14.93□□□□□ -0.02
PRKCSH-209ENST00000589838 RIGQ13278 110 aa14.93□□□□□ -0.02
PRKCSH-209ENST00000589838 SAPCD1Q5SSQ6 148 aa14.93□□□□□ -0.02
PRKCSH-209ENST00000589838 CCL19Q99731 98 aa14.93□□□□□ -0.02
PRKCSH-209ENST00000589838 EEF1AKMT3Q96AZ1 226 aa14.93□□□□□ -0.02
PRKCSH-209ENST00000589838 C20orf144Q9BQM9 153 aa14.93□□□□□ -0.02
PRKCSH-209ENST00000589838 VAMP8Q9BV40 100 aa14.93□□□□□ -0.02
PRKCSH-209ENST00000589838 A0A1B0GUT8 65 aa14.92□□□□□ -0.02
PRKCSH-209ENST00000589838 NTF3P20783 257 aa14.92□□□□□ -0.02
PRKCSH-209ENST00000589838 GPR183P32249 361 aa14.92□□□□□ -0.02
PRKCSH-209ENST00000589838 C5orf56Q8N8D9 126 aa14.92□□□□□ -0.02
PRKCSH-209ENST00000589838 MOB4Q9Y3A3 225 aa14.92□□□□□ -0.02
PRKCSH-209ENST00000589838 TRBV7-1A0A0A6YYK4 115 aa14.91□□□□□ -0.02
PRKCSH-209ENST00000589838 IGHV1-69DA0A0B4J2H0 117 aa14.91□□□□□ -0.02
PRKCSH-209ENST00000589838 ZNF785A8K8V0 405 aa14.91□□□□□ -0.02
PRKCSH-209ENST00000589838 IGHV1-69P01742 117 aa14.91□□□□□ -0.02
PRKCSH-209ENST00000589838 CLEC3BP05452 202 aa14.91□□□□□ -0.02
PRKCSH-209ENST00000589838 NIT1Q86X76 327 aa14.91□□□□□ -0.02
PRKCSH-209ENST00000589838 NDFIP1Q9BT67 221 aa14.91□□□□□ -0.02
PRKCSH-209ENST00000589838 TACC2O95359 2948 aa14.91□□□□□ -0.02
PRKCSH-209ENST00000589838 SH2D7A6NKC9 451 aaPredicted RBP14.91□□□□□ -0.02
PRKCSH-209ENST00000589838 CYB5R2Q6BCY4 276 aa14.91□□□□□ -0.02
PRKCSH-209ENST00000589838 COX8CQ7Z4L0 72 aa14.91□□□□□ -0.02
PRKCSH-209ENST00000589838 ATP6V0BQ99437 205 aa14.91□□□□□ -0.02
PRKCSH-209ENST00000589838 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.9□□□□□ -0.02
PRKCSH-209ENST00000589838 APOHP02749 345 aaPredicted RBP14.9□□□□□ -0.02
PRKCSH-209ENST00000589838 DMRTA1Q5VZB9 504 aa14.9□□□□□ -0.02
PRKCSH-209ENST00000589838 RNASEKQ6P5S7 137 aaKnown RBP14.9□□□□□ -0.02
PRKCSH-209ENST00000589838 FAM19A2Q8N3H0 131 aa14.9□□□□□ -0.02
PRKCSH-209ENST00000589838 C10orf105Q8TEF2 133 aa14.9□□□□□ -0.02
PRKCSH-209ENST00000589838 LOC102724200A0A096LPH7 203 aaPredicted RBP14.89□□□□□ -0.03
PRKCSH-209ENST00000589838 M0R2Z0 102 aa14.89□□□□□ -0.03
PRKCSH-209ENST00000589838 RAB4AP20338 218 aa14.89□□□□□ -0.03
PRKCSH-209ENST00000589838 CLEC2AQ6UVW9 174 aa14.89□□□□□ -0.03
PRKCSH-209ENST00000589838 CHCHD1Q96BP2 118 aaKnown RBP14.89□□□□□ -0.03
PRKCSH-209ENST00000589838 SMAD5-AS1Q9Y6J3 95 aa14.89□□□□□ -0.03
PRKCSH-209ENST00000589838 A0A087X0K7 114 aa14.89□□□□□ -0.03
PRKCSH-209ENST00000589838 CRIP1P50238 77 aa14.89□□□□□ -0.03
PRKCSH-209ENST00000589838 GATD1Q8NB37 220 aa14.89□□□□□ -0.03
PRKCSH-209ENST00000589838 ZFAND3Q9H8U3 227 aa14.89□□□□□ -0.03
PRKCSH-209ENST00000589838 G3V318 75 aa14.88□□□□□ -0.03
PRKCSH-209ENST00000589838 C3orf79P0CE67 100 aa14.88□□□□□ -0.03
PRKCSH-209ENST00000589838 RELQ04864 619 aaPredicted RBP14.88□□□□□ -0.03
PRKCSH-209ENST00000589838 C8orf49Q96NF6 230 aa14.88□□□□□ -0.03
PRKCSH-209ENST00000589838 C2orf88Q9BSF0 95 aa14.88□□□□□ -0.03
PRKCSH-209ENST00000589838 MEGF9Q9H1U4 602 aa14.88□□□□□ -0.03
PRKCSH-209ENST00000589838 NCOR2Q9Y618 2525 aa14.88□□□□□ -0.03
PRKCSH-209ENST00000589838 IGHV4-61A0A0C4DH41 118 aa14.87□□□□□ -0.03
PRKCSH-209ENST00000589838 TMEM189A5PLL7 270 aa14.87□□□□□ -0.03
PRKCSH-209ENST00000589838 CRIP2P52943 208 aaPredicted RBP14.87□□□□□ -0.03
PRKCSH-209ENST00000589838 ATP5G2Q06055 141 aa14.87□□□□□ -0.03
PRKCSH-209ENST00000589838 CLEC19AQ6UXS0 136 aa14.87□□□□□ -0.03
PRKCSH-209ENST00000589838 Q8N976 141 aa14.87□□□□□ -0.03
PRKCSH-209ENST00000589838 RNF114Q9Y508 228 aa14.87□□□□□ -0.03
PRKCSH-209ENST00000589838 BUB3O43684 328 aa14.86□□□□□ -0.03
PRKCSH-209ENST00000589838 BMI1P35226 326 aa14.86□□□□□ -0.03
PRKCSH-209ENST00000589838 RPS20P60866 119 aaKnown RBP14.86□□□□□ -0.03
PRKCSH-209ENST00000589838 Q71RC1 249 aaPredicted RBP14.86□□□□□ -0.03
PRKCSH-209ENST00000589838 PRR25Q96S07 402 aa14.86□□□□□ -0.03
PRKCSH-209ENST00000589838 MIEN1Q9BRT3 115 aa14.86□□□□□ -0.03
PRKCSH-209ENST00000589838 CHD8Q9HCK8 2581 aa14.86□□□□□ -0.03
PRKCSH-209ENST00000589838 IGKV2-40A0A087WW87 121 aaPredicted RBP14.86□□□□□ -0.03
PRKCSH-209ENST00000589838 TRAV41A0A0B4J266 112 aa14.86□□□□□ -0.03
PRKCSH-209ENST00000589838 FAM223BA6NKX1 122 aa14.86□□□□□ -0.03
PRKCSH-209ENST00000589838 LINC01548A6NM66 108 aa14.86□□□□□ -0.03
PRKCSH-209ENST00000589838 IGKV2D-40P01614 121 aaPredicted RBP14.86□□□□□ -0.03
PRKCSH-209ENST00000589838 FAM223AQ8IWN6 122 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms