RNA–Protein interactions for RNA: ENST00000588652.5

ERCC2-211, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, human

TSL 2

Gene ERCC2, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERCC2-211	ENST00000588652	TTC9C	Q8N5M4	171 aa		13.78	□□□□□ -0.2
ERCC2-211	ENST00000588652	OR4F17	Q8NGA8	305 aa		13.78	□□□□□ -0.2
ERCC2-211	ENST00000588652		S4R3C0	116 aa		13.78	□□□□□ -0.2
ERCC2-211	ENST00000588652	NPIPB6	E9PJ23	425 aa		13.78	□□□□□ -0.2
ERCC2-211	ENST00000588652	COL8A1	P27658	744 aa		13.78	□□□□□ -0.2
ERCC2-211	ENST00000588652	RBPMS2	Q6ZRY4	209 aa	Known RBP	13.78	□□□□□ -0.2
ERCC2-211	ENST00000588652	GOLT1A	Q6ZVE7	132 aa		13.78	□□□□□ -0.2
ERCC2-211	ENST00000588652		Q71RC1	249 aa	Predicted RBP	13.78	□□□□□ -0.2
ERCC2-211	ENST00000588652	PRNT	Q86SH4	94 aa		13.78	□□□□□ -0.2
ERCC2-211	ENST00000588652	ZNF491	Q8N8L2	437 aa		13.78	□□□□□ -0.2
ERCC2-211	ENST00000588652	URB1-AS1	Q96HZ7	61 aa		13.78	□□□□□ -0.2
ERCC2-211	ENST00000588652	FAM231B	A6NCW3	169 aa		13.77	□□□□□ -0.21
ERCC2-211	ENST00000588652	CIART	Q8N365	385 aa	Predicted RBP	13.77	□□□□□ -0.21
ERCC2-211	ENST00000588652	SHANK2-AS3	Q9BTD1	123 aa		13.77	□□□□□ -0.21
ERCC2-211	ENST00000588652	COL12A1	Q99715	3063 aa		13.77	□□□□□ -0.21
ERCC2-211	ENST00000588652	IGHV4-39	P01824	125 aa		13.76	□□□□□ -0.21
ERCC2-211	ENST00000588652	BTF3	P20290	206 aa	Known RBP	13.76	□□□□□ -0.21
ERCC2-211	ENST00000588652	G0S2	P27469	103 aa		13.76	□□□□□ -0.21
ERCC2-211	ENST00000588652	LCN12	Q6JVE5	192 aa		13.76	□□□□□ -0.21
ERCC2-211	ENST00000588652	EBLN2	Q6P2I7	272 aa		13.76	□□□□□ -0.21
ERCC2-211	ENST00000588652		Q8N9W7	124 aa		13.76	□□□□□ -0.21
ERCC2-211	ENST00000588652	GNG7	O60262	68 aa		13.76	□□□□□ -0.21
ERCC2-211	ENST00000588652	FAM106CP	P0CH98	169 aa		13.76	□□□□□ -0.21
ERCC2-211	ENST00000588652	IGLC2	P0DOY2	106 aa		13.76	□□□□□ -0.21
ERCC2-211	ENST00000588652	IGLC3	P0DOY3	106 aa		13.76	□□□□□ -0.21
ERCC2-211	ENST00000588652	SAA4	P35542	130 aa		13.76	□□□□□ -0.21
ERCC2-211	ENST00000588652	S100A7A	Q86SG5	101 aa		13.76	□□□□□ -0.21
ERCC2-211	ENST00000588652	RNF125	Q96EQ8	232 aa		13.76	□□□□□ -0.21
ERCC2-211	ENST00000588652	IGHV7-81	A0A0B4J1V7	117 aa		13.75	□□□□□ -0.21
ERCC2-211	ENST00000588652		H3BRN7	92 aa		13.75	□□□□□ -0.21
ERCC2-211	ENST00000588652		K7EQM0	130 aa		13.75	□□□□□ -0.21
ERCC2-211	ENST00000588652	IL4	P05112	153 aa		13.75	□□□□□ -0.21
ERCC2-211	ENST00000588652	PMCHL1	Q16048	86 aa		13.75	□□□□□ -0.21
ERCC2-211	ENST00000588652	FAM120AOS	Q5T036	256 aa		13.75	□□□□□ -0.21
ERCC2-211	ENST00000588652	TRBV19	A0A075B6N1	114 aa		13.75	□□□□□ -0.21
ERCC2-211	ENST00000588652	TRAV30	A0A087WSZ9	112 aa		13.75	□□□□□ -0.21
ERCC2-211	ENST00000588652	TRBV6-1	A0A0K0K1D8	114 aa		13.75	□□□□□ -0.21
ERCC2-211	ENST00000588652	TMEM8B	A6NDV4	472 aa		13.75	□□□□□ -0.21
ERCC2-211	ENST00000588652		F8W735	103 aa	Predicted RBP	13.75	□□□□□ -0.21
ERCC2-211	ENST00000588652	EGR2	P11161	476 aa	Predicted RBP	13.75	□□□□□ -0.21
ERCC2-211	ENST00000588652	MFAP4	P55083	255 aa		13.75	□□□□□ -0.21
ERCC2-211	ENST00000588652	ATOH7	Q8N100	152 aa		13.75	□□□□□ -0.21
ERCC2-211	ENST00000588652	KLHDC1	Q8N7A1	406 aa		13.75	□□□□□ -0.21
ERCC2-211	ENST00000588652	ZNF48	Q96MX3	618 aa	Predicted RBP	13.75	□□□□□ -0.21
ERCC2-211	ENST00000588652	UQCR10	Q9UDW1	63 aa		13.75	□□□□□ -0.21
ERCC2-211	ENST00000588652	CHEK1	O14757	476 aa		13.74	□□□□□ -0.21
ERCC2-211	ENST00000588652	LYPD1	Q8N2G4	141 aa		13.74	□□□□□ -0.21
ERCC2-211	ENST00000588652	C17orf77	Q96MU5	243 aa		13.74	□□□□□ -0.21
ERCC2-211	ENST00000588652	LPAR2	Q9HBW0	351 aa		13.74	□□□□□ -0.21
ERCC2-211	ENST00000588652	C1RL	Q9NZP8	487 aa		13.74	□□□□□ -0.21
ERCC2-211	ENST00000588652	WI2-2373I1.2	A0A1W2PRP0	233 aa		13.74	□□□□□ -0.21
ERCC2-211	ENST00000588652	C2orf70	A6NJV1	201 aa		13.74	□□□□□ -0.21
ERCC2-211	ENST00000588652	FOXA3	P55318	350 aa	Predicted RBP	13.74	□□□□□ -0.21
ERCC2-211	ENST00000588652	BATF	Q16520	125 aa		13.74	□□□□□ -0.21
ERCC2-211	ENST00000588652	IGSF10	Q6WRI0	2623 aa		13.73	□□□□□ -0.21
ERCC2-211	ENST00000588652	ZNF785	A8K8V0	405 aa		13.73	□□□□□ -0.21
ERCC2-211	ENST00000588652	ZNF25	P17030	456 aa	Predicted RBP	13.73	□□□□□ -0.21
ERCC2-211	ENST00000588652	MAJIN	Q3KP22	176 aa		13.73	□□□□□ -0.21
ERCC2-211	ENST00000588652	C21orf62	Q9NYP8	219 aa		13.73	□□□□□ -0.21
ERCC2-211	ENST00000588652	THYN1	Q9P016	225 aa		13.73	□□□□□ -0.21
ERCC2-211	ENST00000588652	ZFP30	Q9Y2G7	519 aa		13.73	□□□□□ -0.21
ERCC2-211	ENST00000588652	HLA-DRB1	P01911	266 aa		13.73	□□□□□ -0.21
ERCC2-211	ENST00000588652	TM4SF20	Q53R12	229 aa		13.73	□□□□□ -0.21
ERCC2-211	ENST00000588652	SIGLEC15	Q6ZMC9	328 aa		13.73	□□□□□ -0.21
ERCC2-211	ENST00000588652	TMEM75	Q8N9X5	138 aa		13.73	□□□□□ -0.21
ERCC2-211	ENST00000588652		M0QZ24	198 aa		13.72	□□□□□ -0.21
ERCC2-211	ENST00000588652	NDUFB8	O95169	186 aa		13.72	□□□□□ -0.21
ERCC2-211	ENST00000588652	APOH	P02749	345 aa	Predicted RBP	13.72	□□□□□ -0.21
ERCC2-211	ENST00000588652	FCGR2B	P31994	310 aa	Predicted RBP	13.72	□□□□□ -0.21
ERCC2-211	ENST00000588652	PIP4P2	Q8N4L2	257 aa		13.72	□□□□□ -0.21
ERCC2-211	ENST00000588652	TXN2	Q99757	166 aa		13.72	□□□□□ -0.21
ERCC2-211	ENST00000588652	ABCA2	Q9BZC7	2435 aa		13.72	□□□□□ -0.21
ERCC2-211	ENST00000588652	SH2D7	A6NKC9	451 aa	Predicted RBP	13.72	□□□□□ -0.21
ERCC2-211	ENST00000588652	MRPS12	O15235	138 aa	Known RBP	13.72	□□□□□ -0.21
ERCC2-211	ENST00000588652		Q56UQ5	140 aa		13.72	□□□□□ -0.21
ERCC2-211	ENST00000588652	ZC2HC1A	Q96GY0	325 aa		13.72	□□□□□ -0.21
ERCC2-211	ENST00000588652	NPFF	O15130	113 aa		13.71	□□□□□ -0.21
ERCC2-211	ENST00000588652	SPATA12	Q7Z6I5	190 aa		13.71	□□□□□ -0.21
ERCC2-211	ENST00000588652	BCL6B	Q8N143	479 aa	Predicted RBP	13.71	□□□□□ -0.21
ERCC2-211	ENST00000588652	CLEC5A	Q9NY25	188 aa		13.71	□□□□□ -0.21
ERCC2-211	ENST00000588652	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	13.71	□□□□□ -0.22
ERCC2-211	ENST00000588652	HAX1	O00165	279 aa		13.71	□□□□□ -0.22
ERCC2-211	ENST00000588652	ZNF124	Q15973	351 aa		13.71	□□□□□ -0.22
ERCC2-211	ENST00000588652		Q6ZN92	141 aa		13.71	□□□□□ -0.22
ERCC2-211	ENST00000588652	CHCHD1	Q96BP2	118 aa	Known RBP	13.71	□□□□□ -0.22
ERCC2-211	ENST00000588652	PSG8	Q9UQ74	426 aa		13.71	□□□□□ -0.22
ERCC2-211	ENST00000588652	CENPVL3	A0A0U1RRI6	287 aa		13.7	□□□□□ -0.22
ERCC2-211	ENST00000588652	IGHV3-23	P01764	117 aa		13.7	□□□□□ -0.22
ERCC2-211	ENST00000588652	ASCL2	Q99929	193 aa		13.7	□□□□□ -0.22
ERCC2-211	ENST00000588652	TMEM208	Q9BTX3	173 aa		13.7	□□□□□ -0.22
ERCC2-211	ENST00000588652	VPS13C	Q709C8	3753 aa		13.7	□□□□□ -0.22
ERCC2-211	ENST00000588652	SMAD7	O15105	426 aa	Known RBP	13.7	□□□□□ -0.22
ERCC2-211	ENST00000588652	HNRNPA3	P51991	378 aa	Known RBP	13.7	□□□□□ -0.22
ERCC2-211	ENST00000588652	PSG3	Q16557	428 aa		13.7	□□□□□ -0.22
ERCC2-211	ENST00000588652	ZNF414	Q96IQ9	312 aa		13.7	□□□□□ -0.22
ERCC2-211	ENST00000588652	NDFIP1	Q9BT67	221 aa		13.7	□□□□□ -0.22
ERCC2-211	ENST00000588652	TRAV9-2	A0A087WT02	112 aa		13.69	□□□□□ -0.22
ERCC2-211	ENST00000588652	IGHV1-24	A0A0C4DH33	117 aa		13.69	□□□□□ -0.22
ERCC2-211	ENST00000588652	PRB4	P10163	310 aa	Predicted RBP	13.69	□□□□□ -0.22
ERCC2-211	ENST00000588652	AAMDC	Q9H7C9	122 aa		13.69	□□□□□ -0.22

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