RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 ZNF503Q96F45 646 aa11.14□□□□□ -0.63
SREBF1-221ENST00000583080 CIB3Q96Q77 187 aaPredicted RBP11.14□□□□□ -0.63
SREBF1-221ENST00000583080 NDUFA13Q9P0J0 144 aa11.14□□□□□ -0.63
SREBF1-221ENST00000583080 GAGE12BA1L429 117 aa11.13□□□□□ -0.63
SREBF1-221ENST00000583080 SMCO3A2RU48 225 aa11.13□□□□□ -0.63
SREBF1-221ENST00000583080 H7BYZ3 331 aa11.13□□□□□ -0.63
SREBF1-221ENST00000583080 GAGE7O76087 117 aa11.13□□□□□ -0.63
SREBF1-221ENST00000583080 IL5P05113 134 aa11.13□□□□□ -0.63
SREBF1-221ENST00000583080 LINC00869P0C866 280 aa11.13□□□□□ -0.63
SREBF1-221ENST00000583080 GAGE12FP0CL80 117 aa11.13□□□□□ -0.63
SREBF1-221ENST00000583080 GAGE12GP0CL81 117 aa11.13□□□□□ -0.63
SREBF1-221ENST00000583080 GAGE12IP0CL82 117 aa11.13□□□□□ -0.63
SREBF1-221ENST00000583080 SLC25A6P12236 298 aa11.13□□□□□ -0.63
SREBF1-221ENST00000583080 S100A7P31151 101 aa11.13□□□□□ -0.63
SREBF1-221ENST00000583080 RAP2BP61225 183 aa11.13□□□□□ -0.63
SREBF1-221ENST00000583080 RPP30P78346 268 aaKnown RBP11.13□□□□□ -0.63
SREBF1-221ENST00000583080 Q6ZRN7 208 aaPredicted RBP11.13□□□□□ -0.63
SREBF1-221ENST00000583080 RPUSD4Q96CM3 377 aaKnown RBP11.13□□□□□ -0.63
SREBF1-221ENST00000583080 MRPS12O15235 138 aaKnown RBP11.12□□□□□ -0.63
SREBF1-221ENST00000583080 HYPMO75409 117 aa11.12□□□□□ -0.63
SREBF1-221ENST00000583080 OR5G3P0C626 314 aa11.12□□□□□ -0.63
SREBF1-221ENST00000583080 VAMP1P23763 118 aa11.12□□□□□ -0.63
SREBF1-221ENST00000583080 GFI1BQ5VTD9 330 aa11.12□□□□□ -0.63
SREBF1-221ENST00000583080 LRTM2Q8N967 370 aa11.12□□□□□ -0.63
SREBF1-221ENST00000583080 SNRPCP09234 159 aaKnown RBP11.11□□□□□ -0.63
SREBF1-221ENST00000583080 INAFM2P0DMQ5 153 aa11.11□□□□□ -0.63
SREBF1-221ENST00000583080 PLP1P60201 277 aa11.11□□□□□ -0.63
SREBF1-221ENST00000583080 TMEM128Q5BJH2 165 aa11.11□□□□□ -0.63
SREBF1-221ENST00000583080 LRRC20Q8TCA0 184 aa11.11□□□□□ -0.63
SREBF1-221ENST00000583080 TMPRSS5Q9H3S3 457 aa11.11□□□□□ -0.63
SREBF1-221ENST00000583080 RABL2AQ9UBK7 228 aaPredicted RBP11.11□□□□□ -0.63
SREBF1-221ENST00000583080 RABL2BQ9UNT1 228 aa11.11□□□□□ -0.63
SREBF1-221ENST00000583080 STRAPQ9Y3F4 350 aaKnown RBP11.11□□□□□ -0.63
SREBF1-221ENST00000583080 PMS2P5A8MQ11 134 aa11.1□□□□□ -0.63
SREBF1-221ENST00000583080 PRAC2D3DTV9 90 aa11.1□□□□□ -0.63
SREBF1-221ENST00000583080 CCNKO75909 580 aa11.1□□□□□ -0.63
SREBF1-221ENST00000583080 RLN2P04090 185 aa11.1□□□□□ -0.63
SREBF1-221ENST00000583080 HOXB5P09067 269 aa11.1□□□□□ -0.63
SREBF1-221ENST00000583080 PATE2Q6UY27 113 aa11.1□□□□□ -0.63
SREBF1-221ENST00000583080 MYCBP2O75592 4640 aa11.09□□□□□ -0.63
SREBF1-221ENST00000583080 PIGBOS1A0A0B4J2F0 54 aa11.09□□□□□ -0.63
SREBF1-221ENST00000583080 J3KRW8 73 aa11.09□□□□□ -0.63
SREBF1-221ENST00000583080 ADAP1O75689 374 aa11.09□□□□□ -0.63
SREBF1-221ENST00000583080 XGP55808 180 aa11.09□□□□□ -0.63
SREBF1-221ENST00000583080 PPP1R1AQ13522 171 aa11.09□□□□□ -0.63
SREBF1-221ENST00000583080 LYPD1Q8N2G4 141 aa11.09□□□□□ -0.63
SREBF1-221ENST00000583080 VSIG2Q96IQ7 327 aa11.09□□□□□ -0.63
SREBF1-221ENST00000583080 C20orf144Q9BQM9 153 aa11.09□□□□□ -0.63
SREBF1-221ENST00000583080 ZNF331Q9NQX6 463 aaPredicted RBP11.09□□□□□ -0.63
SREBF1-221ENST00000583080 CCDC59Q9P031 241 aaKnown RBP11.09□□□□□ -0.63
SREBF1-221ENST00000583080 RSL24D1Q9UHA3 163 aaKnown RBP11.09□□□□□ -0.63
SREBF1-221ENST00000583080 A0A096LPF7 62 aa11.08□□□□□ -0.64
SREBF1-221ENST00000583080 H3BNG1 76 aa11.08□□□□□ -0.64
SREBF1-221ENST00000583080 H3BTX0 84 aa11.08□□□□□ -0.64
SREBF1-221ENST00000583080 SLC17A3O00476 420 aa11.08□□□□□ -0.64
SREBF1-221ENST00000583080 SFT2D2O95562 160 aa11.08□□□□□ -0.64
SREBF1-221ENST00000583080 RRAS2P62070 204 aaPredicted RBP11.08□□□□□ -0.64
SREBF1-221ENST00000583080 Q5VSD8 79 aa11.08□□□□□ -0.64
SREBF1-221ENST00000583080 Q6ZTI0 123 aa11.08□□□□□ -0.64
SREBF1-221ENST00000583080 CCDC190Q86UF4 302 aa11.08□□□□□ -0.64
SREBF1-221ENST00000583080 CCDC28AQ8IWP9 274 aa11.08□□□□□ -0.64
SREBF1-221ENST00000583080 DYNC2LI1Q8TCX1 351 aa11.08□□□□□ -0.64
SREBF1-221ENST00000583080 SOSTQ9BQB4 213 aa11.08□□□□□ -0.64
SREBF1-221ENST00000583080 ARL6Q9H0F7 186 aa11.08□□□□□ -0.64
SREBF1-221ENST00000583080 ARV1Q9H2C2 271 aa11.08□□□□□ -0.64
SREBF1-221ENST00000583080 LINC00854A0A1B0GVQ3 168 aa11.07□□□□□ -0.64
SREBF1-221ENST00000583080 SNURFLB1AK76 121 aa11.07□□□□□ -0.64
SREBF1-221ENST00000583080 CXCL2P19875 107 aa11.07□□□□□ -0.64
SREBF1-221ENST00000583080 POLR2GP62487 172 aaKnown RBP eCLIP11.07□□□□□ -0.64
SREBF1-221ENST00000583080 SLC38A11Q08AI6 406 aa11.07□□□□□ -0.64
SREBF1-221ENST00000583080 LCN15Q6UWW0 184 aa11.07□□□□□ -0.64
SREBF1-221ENST00000583080 TRIM63Q969Q1 353 aa11.07□□□□□ -0.64
SREBF1-221ENST00000583080 FLG2Q5D862 2391 aaPredicted RBP11.07□□□□□ -0.64
SREBF1-221ENST00000583080 VPS13BQ7Z7G8 4022 aa11.07□□□□□ -0.64
SREBF1-221ENST00000583080 ANXA7P20073 488 aaKnown RBP11.06□□□□□ -0.64
SREBF1-221ENST00000583080 SELENOTP62341 195 aa11.06□□□□□ -0.64
SREBF1-221ENST00000583080 ZBTB8BQ8NAP8 495 aaPredicted RBP11.06□□□□□ -0.64
SREBF1-221ENST00000583080 SLC50A1Q9BRV3 221 aa11.06□□□□□ -0.64
SREBF1-221ENST00000583080 PSENENQ9NZ42 101 aa11.06□□□□□ -0.64
SREBF1-221ENST00000583080 TNFRSF18Q9Y5U5 241 aa11.06□□□□□ -0.64
SREBF1-221ENST00000583080 TRAV12-3A0A0B4J271 114 aa11.05□□□□□ -0.64
SREBF1-221ENST00000583080 SSSCA1O60232 199 aa11.05□□□□□ -0.64
SREBF1-221ENST00000583080 DNAH10OSP0CZ25 163 aa11.05□□□□□ -0.64
SREBF1-221ENST00000583080 TNFSF8P32971 234 aa11.05□□□□□ -0.64
SREBF1-221ENST00000583080 FAUP35544 74 aaKnown RBP11.05□□□□□ -0.64
SREBF1-221ENST00000583080 KRTAP10-1P60331 282 aa11.05□□□□□ -0.64
SREBF1-221ENST00000583080 ID3Q02535 119 aa11.05□□□□□ -0.64
SREBF1-221ENST00000583080 MORN5Q5VZ52 161 aa11.05□□□□□ -0.64
SREBF1-221ENST00000583080 FABP12A6NFH5 140 aa11.04□□□□□ -0.64
SREBF1-221ENST00000583080 K7EPK0 472 aa11.04□□□□□ -0.64
SREBF1-221ENST00000583080 SIVA1O15304 175 aa11.04□□□□□ -0.64
SREBF1-221ENST00000583080 CT45A10P0DMU9 189 aa11.04□□□□□ -0.64
SREBF1-221ENST00000583080 ERVFC1-1P60608 527 aa11.04□□□□□ -0.64
SREBF1-221ENST00000583080 LINC00305Q7Z4B0 112 aa11.04□□□□□ -0.64
SREBF1-221ENST00000583080 SLIRPQ9GZT3 109 aaKnown RBP11.04□□□□□ -0.64
SREBF1-221ENST00000583080 PGPEP1Q9NXJ5 209 aa11.04□□□□□ -0.64
SREBF1-221ENST00000583080 NXPH4O95158 308 aa11.03□□□□□ -0.64
SREBF1-221ENST00000583080 METTL15P1P0C7V9 234 aa11.03□□□□□ -0.64
SREBF1-221ENST00000583080 DAZ2Q13117 558 aaKnown RBP11.03□□□□□ -0.64
SREBF1-221ENST00000583080 CDPF1Q6NVV7 123 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 135.4 ms