RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 HIST1H4AP62805 103 aaKnown RBP2.03□□□□□ -2.08
KPNB1-208ENST00000580019 RPL30P62888 115 aaKnown RBP2.03□□□□□ -2.08
KPNB1-208ENST00000580019 OR8G1Q15617 311 aa2.03□□□□□ -2.08
KPNB1-208ENST00000580019 NDUFA5Q16718 116 aa2.03□□□□□ -2.08
KPNB1-208ENST00000580019 C10orf91Q5T1B1 145 aa2.03□□□□□ -2.08
KPNB1-208ENST00000580019 AADACL3Q5VUY0 350 aa2.03□□□□□ -2.08
KPNB1-208ENST00000580019 SLC25A34Q6PIV7 304 aa2.03□□□□□ -2.08
KPNB1-208ENST00000580019 Q6ZR54 194 aa2.03□□□□□ -2.08
KPNB1-208ENST00000580019 LRRC28Q86X40 367 aaPredicted RBP2.03□□□□□ -2.08
KPNB1-208ENST00000580019 RPRMLQ8N4K4 120 aa2.03□□□□□ -2.08
KPNB1-208ENST00000580019 CYB561D1Q8N8Q1 229 aa2.03□□□□□ -2.08
KPNB1-208ENST00000580019 BPIFB6Q8NFQ5 453 aa2.03□□□□□ -2.08
KPNB1-208ENST00000580019 PPTC7Q8NI37 304 aa2.03□□□□□ -2.08
KPNB1-208ENST00000580019 H1FXQ92522 213 aaKnown RBP2.03□□□□□ -2.08
KPNB1-208ENST00000580019 FGF13Q92913 245 aa2.03□□□□□ -2.08
KPNB1-208ENST00000580019 RNASE6Q93091 150 aaKnown RBP2.03□□□□□ -2.08
KPNB1-208ENST00000580019 MGLLQ99685 303 aa2.03□□□□□ -2.08
KPNB1-208ENST00000580019 RNF5Q99942 180 aa2.03□□□□□ -2.08
KPNB1-208ENST00000580019 VPS25Q9BRG1 176 aa2.03□□□□□ -2.08
KPNB1-208ENST00000580019 IL36BQ9NZH7 164 aa2.03□□□□□ -2.08
KPNB1-208ENST00000580019 CKLFQ9UBR5 152 aa2.03□□□□□ -2.08
KPNB1-208ENST00000580019 PRO0461Q9UI25 63 aa2.03□□□□□ -2.08
KPNB1-208ENST00000580019 HSPB8Q9UJY1 196 aa2.03□□□□□ -2.08
KPNB1-208ENST00000580019 ICOSQ9Y6W8 199 aa2.03□□□□□ -2.08
KPNB1-208ENST00000580019 AGRNO00468 2067 aa2.03□□□□□ -2.08
KPNB1-208ENST00000580019 TDRD6O60522 2096 aaKnown RBP2.03□□□□□ -2.08
KPNB1-208ENST00000580019 NOTCH1P46531 2555 aa2.03□□□□□ -2.09
KPNB1-208ENST00000580019 SDK2Q58EX2 2172 aa2.02□□□□□ -2.09
KPNB1-208ENST00000580019 EML5Q05BV3 1969 aa2.02□□□□□ -2.09
KPNB1-208ENST00000580019 ZNF638Q14966 1978 aaKnown RBP2.02□□□□□ -2.09
KPNB1-208ENST00000580019 THADAQ6YHU6 1953 aa2.02□□□□□ -2.09
KPNB1-208ENST00000580019 MYH8P13535 1937 aa2.02□□□□□ -2.09
KPNB1-208ENST00000580019 DENND4CQ5VZ89 1909 aa2.02□□□□□ -2.09
KPNB1-208ENST00000580019 IGLV4-69A0A075B6H9 119 aa2.02□□□□□ -2.09
KPNB1-208ENST00000580019 A0A087WX48 190 aa2.02□□□□□ -2.09
KPNB1-208ENST00000580019 TRAV41A0A0B4J266 112 aa2.02□□□□□ -2.09
KPNB1-208ENST00000580019 DHRS12A0PJE2 317 aa2.02□□□□□ -2.09
KPNB1-208ENST00000580019 K7EP13 123 aa2.02□□□□□ -2.09
KPNB1-208ENST00000580019 CYB5BO43169 146 aa2.02□□□□□ -2.09
KPNB1-208ENST00000580019 SLC25A20O43772 301 aa2.02□□□□□ -2.09
KPNB1-208ENST00000580019 ZNF73O43830 326 aaPredicted RBP2.02□□□□□ -2.09
KPNB1-208ENST00000580019 GGCTO75223 188 aaKnown RBP2.02□□□□□ -2.09
KPNB1-208ENST00000580019 IGKV1-5P01602 117 aa2.02□□□□□ -2.09
KPNB1-208ENST00000580019 IGLV7-43P04211 117 aa2.02□□□□□ -2.09
KPNB1-208ENST00000580019 CISD3P0C7P0 127 aa2.02□□□□□ -2.09
KPNB1-208ENST00000580019 SLC25A16P16260 332 aa2.02□□□□□ -2.09
KPNB1-208ENST00000580019 RPL7P18124 248 aaKnown RBP2.02□□□□□ -2.09
KPNB1-208ENST00000580019 RPS3P23396 243 aaKnown RBP eCLIP2.02□□□□□ -2.099e-7■□□□□ 8.9
KPNB1-208ENST00000580019 CRYBB3P26998 211 aa2.02□□□□□ -2.09
KPNB1-208ENST00000580019 CCR2P41597 374 aa2.02□□□□□ -2.09
KPNB1-208ENST00000580019 TSPEAR-AS2P59090 65 aa2.02□□□□□ -2.09
KPNB1-208ENST00000580019 PSG9Q00887 426 aa2.02□□□□□ -2.09
KPNB1-208ENST00000580019 AKR1C1Q04828 323 aa2.02□□□□□ -2.09
KPNB1-208ENST00000580019 FUT5Q11128 374 aa2.02□□□□□ -2.09
KPNB1-208ENST00000580019 WHAMMP3Q1A5X7 153 aa2.02□□□□□ -2.09
KPNB1-208ENST00000580019 RRN3P1Q2M238 152 aa2.02□□□□□ -2.09
KPNB1-208ENST00000580019 LGALS9BQ3B8N2 356 aa2.02□□□□□ -2.09
KPNB1-208ENST00000580019 MORN2Q502X0 79 aa2.02□□□□□ -2.09
KPNB1-208ENST00000580019 Q5W150 140 aa2.02□□□□□ -2.09
KPNB1-208ENST00000580019 LGALS9CQ6DKI2 356 aa2.02□□□□□ -2.09
KPNB1-208ENST00000580019 Q6ZQT7 251 aa2.02□□□□□ -2.09
KPNB1-208ENST00000580019 LCA10Q71F78 164 aa2.02□□□□□ -2.09
KPNB1-208ENST00000580019 LYZL2Q7Z4W2 148 aa2.02□□□□□ -2.09
KPNB1-208ENST00000580019 IFT20Q8IY31 132 aa2.02□□□□□ -2.09
KPNB1-208ENST00000580019 OR8I2Q8N0Y5 310 aa2.02□□□□□ -2.09
KPNB1-208ENST00000580019 LRRC18Q8N456 261 aa2.02□□□□□ -2.09
KPNB1-208ENST00000580019 APCDD1LQ8NCL9 501 aa2.02□□□□□ -2.09
KPNB1-208ENST00000580019 UBALD1Q8TB05 177 aa2.02□□□□□ -2.09
KPNB1-208ENST00000580019 RPS4Y2Q8TD47 263 aa2.02□□□□□ -2.09
KPNB1-208ENST00000580019 CANT1Q8WVQ1 401 aa2.02□□□□□ -2.09
KPNB1-208ENST00000580019 ZNF285Q96NJ3 590 aa2.02□□□□□ -2.09
KPNB1-208ENST00000580019 TM2D3Q9BRN9 247 aa2.02□□□□□ -2.09
KPNB1-208ENST00000580019 UPK3BQ9BT76 320 aa2.02□□□□□ -2.09
KPNB1-208ENST00000580019 PLA2G2FQ9BZM2 168 aa2.02□□□□□ -2.09
KPNB1-208ENST00000580019 LINC00574Q9H8X3 128 aa2.02□□□□□ -2.09
KPNB1-208ENST00000580019 PCTPQ9UKL6 214 aa2.02□□□□□ -2.09
KPNB1-208ENST00000580019 MCTS1Q9ULC4 181 aaKnown RBP2.02□□□□□ -2.09
KPNB1-208ENST00000580019 MED31Q9Y3C7 131 aa2.02□□□□□ -2.09
KPNB1-208ENST00000580019 NUP210Q8TEM1 1887 aaPredicted RBP2.02□□□□□ -2.09
KPNB1-208ENST00000580019 VPS13CQ709C8 3753 aa2.01□□□□□ -2.09
KPNB1-208ENST00000580019 IGSF9BQ9UPX0 1349 aa2.01□□□□□ -2.09
KPNB1-208ENST00000580019 ZNF469Q96JG9 3925 aaPredicted RBP2.01□□□□□ -2.09
KPNB1-208ENST00000580019 IGLV3-10A0A075B6K4 115 aa2.01□□□□□ -2.09
KPNB1-208ENST00000580019 TRDV1A0A1B0GX56 115 aa2.01□□□□□ -2.09
KPNB1-208ENST00000580019 TLCD2A6NGC4 264 aa2.01□□□□□ -2.09
KPNB1-208ENST00000580019 H3BMM0 161 aa2.01□□□□□ -2.09
KPNB1-208ENST00000580019 LECT2O14960 151 aa2.01□□□□□ -2.09
KPNB1-208ENST00000580019 ZNF861PO60384 105 aa2.01□□□□□ -2.09
KPNB1-208ENST00000580019 C1QAP02745 245 aa2.01□□□□□ -2.09
KPNB1-208ENST00000580019 IL4P05112 153 aa2.01□□□□□ -2.09
KPNB1-208ENST00000580019 UBBP0CG47 229 aa2.01□□□□□ -2.09
KPNB1-208ENST00000580019 CRHBPP24387 322 aa2.01□□□□□ -2.09
KPNB1-208ENST00000580019 FXYD7P58549 80 aa2.01□□□□□ -2.09
KPNB1-208ENST00000580019 YPEL3P61236 119 aaPredicted RBP2.01□□□□□ -2.09
KPNB1-208ENST00000580019 PLCXD2Q0VAA5 305 aa2.01□□□□□ -2.09
KPNB1-208ENST00000580019 RTL8BQ17RB0 113 aa2.01□□□□□ -2.09
KPNB1-208ENST00000580019 SPANXN3Q5MJ09 141 aa2.01□□□□□ -2.09
KPNB1-208ENST00000580019 BCL2L15Q5TBC7 163 aa2.01□□□□□ -2.09
KPNB1-208ENST00000580019 RASL11AQ6T310 242 aa2.01□□□□□ -2.09
KPNB1-208ENST00000580019 C16orf47Q6ZP98 133 aaPredicted RBP2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms