RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 PXDC1Q5TGL8 231 aa2.79□□□□□ -1.96
SMARCE1-215ENST00000578995 LEMD1Q68G75 181 aa2.79□□□□□ -1.96
SMARCE1-215ENST00000578995 LCN12Q6JVE5 192 aa2.79□□□□□ -1.96
SMARCE1-215ENST00000578995 TCF24Q7RTU0 167 aa2.79□□□□□ -1.96
SMARCE1-215ENST00000578995 SUN5Q8TC36 379 aa2.79□□□□□ -1.96
SMARCE1-215ENST00000578995 SAT2Q96F10 170 aaPredicted RBP2.79□□□□□ -1.96
SMARCE1-215ENST00000578995 METTL26Q96S19 204 aa2.79□□□□□ -1.96
SMARCE1-215ENST00000578995 GINS3Q9BRX5 216 aa2.79□□□□□ -1.96
SMARCE1-215ENST00000578995 PSMG3Q9BT73 122 aaPredicted RBP2.79□□□□□ -1.96
SMARCE1-215ENST00000578995 SLC25A2Q9BXI2 301 aa2.79□□□□□ -1.96
SMARCE1-215ENST00000578995 MS4A6AQ9H2W1 248 aa2.79□□□□□ -1.96
SMARCE1-215ENST00000578995 MAP6D1Q9H9H5 199 aa2.79□□□□□ -1.96
SMARCE1-215ENST00000578995 SEPSECSQ9HD40 501 aaKnown RBP2.79□□□□□ -1.96
SMARCE1-215ENST00000578995 DOK5Q9P104 306 aa2.79□□□□□ -1.96
SMARCE1-215ENST00000578995 RABAC1Q9UI14 185 aa2.79□□□□□ -1.96
SMARCE1-215ENST00000578995 TIMM9Q9Y5J7 89 aa2.79□□□□□ -1.96
SMARCE1-215ENST00000578995 CSMD3Q7Z407 3707 aa2.78□□□□□ -1.96
SMARCE1-215ENST00000578995 STARD9Q9P2P6 4700 aa2.78□□□□□ -1.96
SMARCE1-215ENST00000578995 SLC17A3O00476 420 aa2.78□□□□□ -1.96
SMARCE1-215ENST00000578995 BCL2L11O43521 198 aa2.78□□□□□ -1.96
SMARCE1-215ENST00000578995 HYPMO75409 117 aa2.78□□□□□ -1.96
SMARCE1-215ENST00000578995 EIF3GO75821 320 aaKnown RBP eCLIP2.78□□□□□ -1.96
SMARCE1-215ENST00000578995 FABP1P07148 127 aa2.78□□□□□ -1.96
SMARCE1-215ENST00000578995 IGHV4-30-4P0DP06 118 aa2.78□□□□□ -1.96
SMARCE1-215ENST00000578995 SPP1P10451 314 aa2.78□□□□□ -1.96
SMARCE1-215ENST00000578995 ORM2P19652 201 aa2.78□□□□□ -1.96
SMARCE1-215ENST00000578995 HLA-DMBP28068 263 aa2.78□□□□□ -1.96
SMARCE1-215ENST00000578995 DEFB1P60022 68 aa2.78□□□□□ -1.96
SMARCE1-215ENST00000578995 RAB2AP61019 212 aa2.78□□□□□ -1.96
SMARCE1-215ENST00000578995 B2MP61769 119 aa2.78□□□□□ -1.96
SMARCE1-215ENST00000578995 GDF5OSQ5U4N7 250 aa2.78□□□□□ -1.96
SMARCE1-215ENST00000578995 SIGLEC15Q6ZMC9 328 aa2.78□□□□□ -1.96
SMARCE1-215ENST00000578995 MIR17HGQ75NE6 70 aa2.78□□□□□ -1.96
SMARCE1-215ENST00000578995 LINC00305Q7Z4B0 112 aa2.78□□□□□ -1.96
SMARCE1-215ENST00000578995 AKAP14Q86UN6 197 aa2.78□□□□□ -1.96
SMARCE1-215ENST00000578995 RPP25LQ8N5L8 163 aaKnown RBP2.78□□□□□ -1.96
SMARCE1-215ENST00000578995 DEFB125Q8N687 156 aa2.78□□□□□ -1.96
SMARCE1-215ENST00000578995 OR1B1Q8NGR6 318 aa2.78□□□□□ -1.96
SMARCE1-215ENST00000578995 STOML3Q8TAV4 291 aa2.78□□□□□ -1.96
SMARCE1-215ENST00000578995 DYNLRB2Q8TF09 96 aa2.78□□□□□ -1.96
SMARCE1-215ENST00000578995 GATAD1Q8WUU5 269 aa2.78□□□□□ -1.96
SMARCE1-215ENST00000578995 FXYD5Q96DB9 178 aa2.78□□□□□ -1.96
SMARCE1-215ENST00000578995 GRAMD2BQ96HH9 432 aa2.78□□□□□ -1.96
SMARCE1-215ENST00000578995 MLST8Q9BVC4 326 aa2.78□□□□□ -1.96
SMARCE1-215ENST00000578995 PBDC1Q9BVG4 233 aa2.78□□□□□ -1.96
SMARCE1-215ENST00000578995 MFFQ9GZY8 342 aa2.78□□□□□ -1.96
SMARCE1-215ENST00000578995 ARL6Q9H0F7 186 aa2.78□□□□□ -1.96
SMARCE1-215ENST00000578995 NRN1Q9NPD7 142 aa2.78□□□□□ -1.96
SMARCE1-215ENST00000578995 RPRMQ9NS64 109 aa2.78□□□□□ -1.96
SMARCE1-215ENST00000578995 ZNF586Q9NXT0 402 aa2.78□□□□□ -1.96
SMARCE1-215ENST00000578995 TMEM14CQ9P0S9 112 aa2.78□□□□□ -1.96
SMARCE1-215ENST00000578995 HIGD1AQ9Y241 93 aa2.78□□□□□ -1.96
SMARCE1-215ENST00000578995 VPS13DQ5THJ4 4388 aa2.78□□□□□ -1.96
SMARCE1-215ENST00000578995 SACSQ9NZJ4 4579 aa2.77□□□□□ -1.97
SMARCE1-215ENST00000578995 MUC4Q99102 2169 aa2.77□□□□□ -1.97
SMARCE1-215ENST00000578995 A0A1W2PS18 150 aa2.77□□□□□ -1.97
SMARCE1-215ENST00000578995 HELTA6NFD8 242 aa2.77□□□□□ -1.97
SMARCE1-215ENST00000578995 OR4C46A6NHA9 309 aa2.77□□□□□ -1.97
SMARCE1-215ENST00000578995 TAAR5O14804 337 aa2.77□□□□□ -1.97
SMARCE1-215ENST00000578995 COX7A2P2O60397 106 aa2.77□□□□□ -1.97
SMARCE1-215ENST00000578995 ZNF253O75346 499 aa2.77□□□□□ -1.97
SMARCE1-215ENST00000578995 SCGB2A1O75556 95 aa2.77□□□□□ -1.97
SMARCE1-215ENST00000578995 CD5P06127 495 aa2.77□□□□□ -1.97
SMARCE1-215ENST00000578995 FRMD6-AS1P0C7T7 363 aa2.77□□□□□ -1.97
SMARCE1-215ENST00000578995 STAG3L2P0CL84 134 aa2.77□□□□□ -1.97
SMARCE1-215ENST00000578995 STAG3L3P0CL85 134 aa2.77□□□□□ -1.97
SMARCE1-215ENST00000578995 PYYP10082 97 aa2.77□□□□□ -1.97
SMARCE1-215ENST00000578995 C4BPBP20851 252 aa2.77□□□□□ -1.97
SMARCE1-215ENST00000578995 NUP62P37198 522 aaPredicted RBP2.77□□□□□ -1.97
SMARCE1-215ENST00000578995 PSMB3P49720 205 aa2.77□□□□□ -1.97
SMARCE1-215ENST00000578995 AP2S1P53680 142 aaPredicted RBP2.77□□□□□ -1.97
SMARCE1-215ENST00000578995 CD81P60033 236 aa2.77□□□□□ -1.97
SMARCE1-215ENST00000578995 ZNF266Q14584 549 aa2.77□□□□□ -1.97
SMARCE1-215ENST00000578995 FFAR4Q5NUL3 377 aa2.77□□□□□ -1.97
SMARCE1-215ENST00000578995 C10orf113Q5VZT2 155 aa2.77□□□□□ -1.97
SMARCE1-215ENST00000578995 AMTNQ6UX39 209 aa2.77□□□□□ -1.97
SMARCE1-215ENST00000578995 TMUB2Q71RG4 321 aa2.77□□□□□ -1.97
SMARCE1-215ENST00000578995 TRPT1Q86TN4 253 aaKnown RBP2.77□□□□□ -1.97
SMARCE1-215ENST00000578995 APRG1Q8IVJ8 170 aa2.77□□□□□ -1.97
SMARCE1-215ENST00000578995 SBSPONQ8IVN8 264 aa2.77□□□□□ -1.97
SMARCE1-215ENST00000578995 GBGT1Q8N5D6 347 aa2.77□□□□□ -1.97
SMARCE1-215ENST00000578995 HSD17B11Q8NBQ5 300 aa2.77□□□□□ -1.97
SMARCE1-215ENST00000578995 CSNK1G2-AS1Q8NCQ2 148 aa2.77□□□□□ -1.97
SMARCE1-215ENST00000578995 CLUHP3Q96NS8 147 aa2.77□□□□□ -1.97
SMARCE1-215ENST00000578995 PFDN5Q99471 154 aa2.77□□□□□ -1.97
SMARCE1-215ENST00000578995 B9D2Q9BPU9 175 aa2.77□□□□□ -1.97
SMARCE1-215ENST00000578995 TM2D3Q9BRN9 247 aa2.77□□□□□ -1.97
SMARCE1-215ENST00000578995 MRPL32Q9BYC8 188 aaKnown RBP2.77□□□□□ -1.97
SMARCE1-215ENST00000578995 TMEM231Q9H6L2 316 aa2.77□□□□□ -1.97
SMARCE1-215ENST00000578995 DNAJC4Q9NNZ3 241 aa2.77□□□□□ -1.97
SMARCE1-215ENST00000578995 ZNF331Q9NQX6 463 aaPredicted RBP2.77□□□□□ -1.97
SMARCE1-215ENST00000578995 UBQLN2Q9UHD9 624 aa2.77□□□□□ -1.97
SMARCE1-215ENST00000578995 FUT9Q9Y231 359 aa2.77□□□□□ -1.97
SMARCE1-215ENST00000578995 PLECQ15149 4684 aaKnown RBP2.77□□□□□ -1.97
SMARCE1-215ENST00000578995 IGKV3-7A0A075B6H7 116 aa2.76□□□□□ -1.97
SMARCE1-215ENST00000578995 TRBV19A0A075B6N1 114 aa2.76□□□□□ -1.97
SMARCE1-215ENST00000578995 A0A0D9SG52 128 aa2.76□□□□□ -1.97
SMARCE1-215ENST00000578995 OR11H12B2RN74 326 aa2.76□□□□□ -1.97
SMARCE1-215ENST00000578995 PRAC2D3DTV9 90 aa2.76□□□□□ -1.97
SMARCE1-215ENST00000578995 F6UB75 175 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms