RNA–Protein interactions for RNA: ENST00000578415.1

TSEN54-205, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-205ENST00000578415 KIR3DS1Q14943 382 aa14.53□□□□□ -0.08
TSEN54-205ENST00000578415 OR10J6PQ8NGY7 276 aa14.53□□□□□ -0.08
TSEN54-205ENST00000578415 RXFP4Q8TDU9 374 aa14.53□□□□□ -0.08
TSEN54-205ENST00000578415 ZNF503Q96F45 646 aa14.53□□□□□ -0.08
TSEN54-205ENST00000578415 UPK3BQ9BT76 320 aa14.53□□□□□ -0.08
TSEN54-205ENST00000578415 SMCO3A2RU48 225 aa14.52□□□□□ -0.09
TSEN54-205ENST00000578415 H7BYZ3 331 aa14.52□□□□□ -0.09
TSEN54-205ENST00000578415 ZNF701M0R085 212 aaPredicted RBP14.52□□□□□ -0.09
TSEN54-205ENST00000578415 MRPS12O15235 138 aaKnown RBP14.52□□□□□ -0.09
TSEN54-205ENST00000578415 HOXB5P09067 269 aa14.52□□□□□ -0.09
TSEN54-205ENST00000578415 BTF3P20290 206 aaKnown RBP14.52□□□□□ -0.09
TSEN54-205ENST00000578415 HOXA5P20719 270 aa14.52□□□□□ -0.09
TSEN54-205ENST00000578415 PPP1R1AQ13522 171 aa14.52□□□□□ -0.09
TSEN54-205ENST00000578415 TRIM63Q969Q1 353 aa14.52□□□□□ -0.09
TSEN54-205ENST00000578415 RPUSD4Q96CM3 377 aaKnown RBP14.52□□□□□ -0.09
TSEN54-205ENST00000578415 A0A0J9YY99 117 aa14.51□□□□□ -0.09
TSEN54-205ENST00000578415 CCDC160A6NGH7 325 aa14.51□□□□□ -0.09
TSEN54-205ENST00000578415 NOL3O60936 208 aaKnown RBP14.51□□□□□ -0.09
TSEN54-205ENST00000578415 SFT2D2O95562 160 aa14.51□□□□□ -0.09
TSEN54-205ENST00000578415 OR5G3P0C626 314 aa14.51□□□□□ -0.09
TSEN54-205ENST00000578415 TNFSF8P32971 234 aa14.51□□□□□ -0.09
TSEN54-205ENST00000578415 ESRGQ1W209 222 aa14.51□□□□□ -0.09
TSEN54-205ENST00000578415 A0A1W2PPQ1 181 aa14.5□□□□□ -0.09
TSEN54-205ENST00000578415 FABP12A6NFH5 140 aa14.5□□□□□ -0.09
TSEN54-205ENST00000578415 PMS2P5A8MQ11 134 aa14.5□□□□□ -0.09
TSEN54-205ENST00000578415 FAUP35544 74 aaKnown RBP14.5□□□□□ -0.09
TSEN54-205ENST00000578415 PATE2Q6UY27 113 aa14.5□□□□□ -0.09
TSEN54-205ENST00000578415 LRRC20Q8TCA0 184 aa14.5□□□□□ -0.09
TSEN54-205ENST00000578415 SLIRPQ9GZT3 109 aaKnown RBP14.5□□□□□ -0.09
TSEN54-205ENST00000578415 SELENOTP62341 195 aa14.49□□□□□ -0.09
TSEN54-205ENST00000578415 POLR2GP62487 172 aaKnown RBP eCLIP14.49□□□□□ -0.09
TSEN54-205ENST00000578415 DLK1P80370 383 aa14.49□□□□□ -0.09
TSEN54-205ENST00000578415 PARD6GQ9BYG4 376 aaPredicted RBP14.49□□□□□ -0.09
TSEN54-205ENST00000578415 MRPS16Q9Y3D3 137 aaKnown RBP14.49□□□□□ -0.09
TSEN54-205ENST00000578415 GAGE12BA1L429 117 aa14.48□□□□□ -0.09
TSEN54-205ENST00000578415 CCNKO75909 580 aa14.48□□□□□ -0.09
TSEN54-205ENST00000578415 GAGE7O76087 117 aa14.48□□□□□ -0.09
TSEN54-205ENST00000578415 GAGE12FP0CL80 117 aa14.48□□□□□ -0.09
TSEN54-205ENST00000578415 GAGE12GP0CL81 117 aa14.48□□□□□ -0.09
TSEN54-205ENST00000578415 GAGE12IP0CL82 117 aa14.48□□□□□ -0.09
TSEN54-205ENST00000578415 ID3Q02535 119 aa14.48□□□□□ -0.09
TSEN54-205ENST00000578415 GFI1BQ5VTD9 330 aa14.48□□□□□ -0.09
TSEN54-205ENST00000578415 RAB2BQ8WUD1 216 aa14.48□□□□□ -0.09
TSEN54-205ENST00000578415 C20orf144Q9BQM9 153 aa14.48□□□□□ -0.09
TSEN54-205ENST00000578415 SLC25A21Q9BQT8 299 aaPredicted RBP14.48□□□□□ -0.09
TSEN54-205ENST00000578415 ARL6Q9H0F7 186 aa14.48□□□□□ -0.09
TSEN54-205ENST00000578415 ZNF331Q9NQX6 463 aaPredicted RBP14.48□□□□□ -0.09
TSEN54-205ENST00000578415 ZNF586Q9NXT0 402 aa14.48□□□□□ -0.09
TSEN54-205ENST00000578415 SNRPCP09234 159 aaKnown RBP14.47□□□□□ -0.09
TSEN54-205ENST00000578415 TMBIM6P55061 237 aa14.47□□□□□ -0.09
TSEN54-205ENST00000578415 ARV1Q9H2C2 271 aa14.47□□□□□ -0.09
TSEN54-205ENST00000578415 PSENENQ9NZ42 101 aa14.47□□□□□ -0.09
TSEN54-205ENST00000578415 PRAC2D3DTV9 90 aa14.46□□□□□ -0.09
TSEN54-205ENST00000578415 H3BNG1 76 aa14.46□□□□□ -0.09
TSEN54-205ENST00000578415 K7EPK0 472 aa14.46□□□□□ -0.09
TSEN54-205ENST00000578415 ADAP1O75689 374 aa14.46□□□□□ -0.09
TSEN54-205ENST00000578415 CXCL2P19875 107 aa14.46□□□□□ -0.09
TSEN54-205ENST00000578415 AP3S2P59780 193 aa14.46□□□□□ -0.09
TSEN54-205ENST00000578415 RRAS2P62070 204 aaPredicted RBP14.46□□□□□ -0.09
TSEN54-205ENST00000578415 TOMM5Q8N4H5 51 aa14.46□□□□□ -0.09
TSEN54-205ENST00000578415 NDUFA13Q9P0J0 144 aa14.46□□□□□ -0.09
TSEN54-205ENST00000578415 RLN2P04090 185 aa14.45□□□□□ -0.1
TSEN54-205ENST00000578415 ANXA7P20073 488 aaKnown RBP14.45□□□□□ -0.1
TSEN54-205ENST00000578415 LCN15Q6UWW0 184 aa14.45□□□□□ -0.1
TSEN54-205ENST00000578415 Q6ZRN7 208 aaPredicted RBP14.45□□□□□ -0.1
TSEN54-205ENST00000578415 S100A7AQ86SG5 101 aa14.45□□□□□ -0.1
TSEN54-205ENST00000578415 CCDC28AQ8IWP9 274 aa14.45□□□□□ -0.1
TSEN54-205ENST00000578415 MCFD2Q8NI22 146 aa14.45□□□□□ -0.1
TSEN54-205ENST00000578415 SLC17A3O00476 420 aa14.44□□□□□ -0.1
TSEN54-205ENST00000578415 SSSCA1O60232 199 aa14.44□□□□□ -0.1
TSEN54-205ENST00000578415 LINC00315P59091 139 aa14.44□□□□□ -0.1
TSEN54-205ENST00000578415 SLC38A11Q08AI6 406 aa14.44□□□□□ -0.1
TSEN54-205ENST00000578415 ZBTB8BQ8NAP8 495 aaPredicted RBP14.44□□□□□ -0.1
TSEN54-205ENST00000578415 BCL7BQ9BQE9 202 aa14.44□□□□□ -0.1
TSEN54-205ENST00000578415 SLC50A1Q9BRV3 221 aa14.44□□□□□ -0.1
TSEN54-205ENST00000578415 RBM38Q9H0Z9 239 aaKnown RBP14.44□□□□□ -0.1
TSEN54-205ENST00000578415 TMPRSS5Q9H3S3 457 aa14.44□□□□□ -0.1
TSEN54-205ENST00000578415 NPVFQ9HCQ7 196 aa14.44□□□□□ -0.1
TSEN54-205ENST00000578415 BATF3Q9NR55 127 aa14.44□□□□□ -0.1
TSEN54-205ENST00000578415 EPM2AB3EWF7 344 aa14.43□□□□□ -0.1
TSEN54-205ENST00000578415 METTL15P1P0C7V9 234 aa14.43□□□□□ -0.1
TSEN54-205ENST00000578415 PYDC2Q56P42 97 aa14.43□□□□□ -0.1
TSEN54-205ENST00000578415 TMEM14EPQ6UXP3 125 aa14.43□□□□□ -0.1
TSEN54-205ENST00000578415 CCDC190Q86UF4 302 aa14.43□□□□□ -0.1
TSEN54-205ENST00000578415 SMIM8Q96KF7 97 aa14.43□□□□□ -0.1
TSEN54-205ENST00000578415 A0A096LPF7 62 aa14.42□□□□□ -0.1
TSEN54-205ENST00000578415 A6NHS1 94 aa14.42□□□□□ -0.1
TSEN54-205ENST00000578415 SNURFLB1AK76 121 aa14.42□□□□□ -0.1
TSEN54-205ENST00000578415 FNDC10F2Z333 226 aa14.42□□□□□ -0.1
TSEN54-205ENST00000578415 H3BMQ9 156 aa14.42□□□□□ -0.1
TSEN54-205ENST00000578415 H3BTX0 84 aa14.42□□□□□ -0.1
TSEN54-205ENST00000578415 TEPPQ6URK8 271 aa14.42□□□□□ -0.1
TSEN54-205ENST00000578415 LINC00305Q7Z4B0 112 aa14.42□□□□□ -0.1
TSEN54-205ENST00000578415 VSIG2Q96IQ7 327 aa14.42□□□□□ -0.1
TSEN54-205ENST00000578415 RNF24Q9Y225 148 aa14.42□□□□□ -0.1
TSEN54-205ENST00000578415 V9GYH0 126 aa14.42□□□□□ -0.1
TSEN54-205ENST00000578415 LINC00854A0A1B0GVQ3 168 aa14.41□□□□□ -0.1
TSEN54-205ENST00000578415 C9orf170A2RU37 121 aa14.41□□□□□ -0.1
TSEN54-205ENST00000578415 DAZ2Q13117 558 aaKnown RBP14.41□□□□□ -0.1
TSEN54-205ENST00000578415 PXDC1Q5TGL8 231 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms