RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 CLVS1Q8IUQ0 354 aaPredicted RBP9.19□□□□□ -0.94
COPS3-214ENST00000577246 OR51S1Q8NGJ8 323 aa9.19□□□□□ -0.94
COPS3-214ENST00000577246 SMIM4Q8WVI0 70 aa9.19□□□□□ -0.94
COPS3-214ENST00000577246 C18orf15Q96N68 181 aa9.19□□□□□ -0.94
COPS3-214ENST00000577246 PRR13Q9NZ81 148 aa9.19□□□□□ -0.94
COPS3-214ENST00000577246 HIGD1AQ9Y241 93 aa9.19□□□□□ -0.94
COPS3-214ENST00000577246 A0A087X0K7 114 aa9.18□□□□□ -0.94
COPS3-214ENST00000577246 SLC25A6P12236 298 aa9.18□□□□□ -0.94
COPS3-214ENST00000577246 CXCL2P19875 107 aa9.18□□□□□ -0.94
COPS3-214ENST00000577246 ICAM4Q14773 271 aa9.18□□□□□ -0.94
COPS3-214ENST00000577246 RPUSD4Q96CM3 377 aaKnown RBP9.18□□□□□ -0.94
COPS3-214ENST00000577246 RGS5O15539 181 aa9.17□□□□□ -0.94
COPS3-214ENST00000577246 PITX3O75364 302 aa9.17□□□□□ -0.94
COPS3-214ENST00000577246 HYPMO75409 117 aa9.17□□□□□ -0.94
COPS3-214ENST00000577246 IL5P05113 134 aa9.17□□□□□ -0.94
COPS3-214ENST00000577246 GATA2P23769 480 aaPredicted RBP9.17□□□□□ -0.94
COPS3-214ENST00000577246 RABL2AQ9UBK7 228 aaPredicted RBP9.17□□□□□ -0.94
COPS3-214ENST00000577246 RABL2BQ9UNT1 228 aa9.17□□□□□ -0.94
COPS3-214ENST00000577246 TRGV2A0A075B6R0 118 aa9.16□□□□□ -0.94
COPS3-214ENST00000577246 TRAV9-2A0A087WT02 112 aa9.16□□□□□ -0.94
COPS3-214ENST00000577246 A0A096LPF7 62 aa9.16□□□□□ -0.94
COPS3-214ENST00000577246 PRSS46E5RG02 174 aa9.16□□□□□ -0.94
COPS3-214ENST00000577246 J3QL48 77 aa9.16□□□□□ -0.94
COPS3-214ENST00000577246 OR5G3P0C626 314 aa9.16□□□□□ -0.94
COPS3-214ENST00000577246 SELENOTP62341 195 aa9.16□□□□□ -0.94
COPS3-214ENST00000577246 DAZ2Q13117 558 aaKnown RBP9.16□□□□□ -0.94
COPS3-214ENST00000577246 Q6ZSN1 163 aa9.16□□□□□ -0.94
COPS3-214ENST00000577246 CYP2G1PQ6ZSU1 146 aa9.16□□□□□ -0.94
COPS3-214ENST00000577246 SLC50A1Q9BRV3 221 aa9.16□□□□□ -0.94
COPS3-214ENST00000577246 TMPRSS5Q9H3S3 457 aa9.16□□□□□ -0.94
COPS3-214ENST00000577246 CTDSPLO15194 276 aa9.15□□□□□ -0.94
COPS3-214ENST00000577246 SYNGR2O43760 224 aa9.15□□□□□ -0.94
COPS3-214ENST00000577246 LINC00869P0C866 280 aa9.15□□□□□ -0.94
COPS3-214ENST00000577246 ANXA7P20073 488 aaKnown RBP9.15□□□□□ -0.94
COPS3-214ENST00000577246 PLP1P60201 277 aa9.15□□□□□ -0.94
COPS3-214ENST00000577246 LCN15Q6UWW0 184 aa9.15□□□□□ -0.94
COPS3-214ENST00000577246 TMEM182Q6ZP80 229 aaPredicted RBP9.15□□□□□ -0.94
COPS3-214ENST00000577246 ACOT7LQ6ZUV0 252 aa9.15□□□□□ -0.94
COPS3-214ENST00000577246 CCDC190Q86UF4 302 aa9.15□□□□□ -0.94
COPS3-214ENST00000577246 PYGO2Q9BRQ0 406 aa9.15□□□□□ -0.94
COPS3-214ENST00000577246 MCUBQ9NWR8 336 aa9.15□□□□□ -0.94
COPS3-214ENST00000577246 STRAPQ9Y3F4 350 aaKnown RBP9.15□□□□□ -0.94
COPS3-214ENST00000577246 A0A087WTM6 91 aa9.14□□□□□ -0.95
COPS3-214ENST00000577246 SMCO3A2RU48 225 aa9.14□□□□□ -0.95
COPS3-214ENST00000577246 K7EP13 123 aa9.14□□□□□ -0.95
COPS3-214ENST00000577246 WRBO00258 174 aa9.14□□□□□ -0.95
COPS3-214ENST00000577246 NXPH4O95158 308 aa9.14□□□□□ -0.95
COPS3-214ENST00000577246 SPANXN5Q5MJ07 72 aa9.14□□□□□ -0.95
COPS3-214ENST00000577246 GFI1BQ5VTD9 330 aa9.14□□□□□ -0.95
COPS3-214ENST00000577246 TMED4Q7Z7H5 227 aa9.14□□□□□ -0.95
COPS3-214ENST00000577246 ZNF680Q8NEM1 530 aa9.14□□□□□ -0.95
COPS3-214ENST00000577246 ICOSQ9Y6W8 199 aa9.14□□□□□ -0.95
COPS3-214ENST00000577246 ANKRD20A5PA0PJZ0 165 aa9.13□□□□□ -0.95
COPS3-214ENST00000577246 GCSHP23434 173 aa9.13□□□□□ -0.95
COPS3-214ENST00000577246 FUSP35637 526 aaKnown RBP eCLIP9.13□□□□□ -0.95
COPS3-214ENST00000577246 LEPP41159 167 aa9.13□□□□□ -0.95
COPS3-214ENST00000577246 KRTAP10-1P60331 282 aa9.13□□□□□ -0.95
COPS3-214ENST00000577246 IL18Q14116 193 aa9.13□□□□□ -0.95
COPS3-214ENST00000577246 VSIG2Q96IQ7 327 aa9.13□□□□□ -0.95
COPS3-214ENST00000577246 ZNF331Q9NQX6 463 aaPredicted RBP9.13□□□□□ -0.95
COPS3-214ENST00000577246 MYCBP2O75592 4640 aa9.12□□□□□ -0.95
COPS3-214ENST00000577246 PMS2P5A8MQ11 134 aa9.12□□□□□ -0.95
COPS3-214ENST00000577246 SMR3BP02814 79 aaPredicted RBP9.12□□□□□ -0.95
COPS3-214ENST00000577246 TMEM128Q5BJH2 165 aa9.12□□□□□ -0.95
COPS3-214ENST00000577246 PXDC1Q5TGL8 231 aa9.12□□□□□ -0.95
COPS3-214ENST00000577246 Q6ZTI0 123 aa9.12□□□□□ -0.95
COPS3-214ENST00000577246 LRTM2Q8N967 370 aa9.12□□□□□ -0.95
COPS3-214ENST00000577246 ODF3Q96PU9 254 aa9.12□□□□□ -0.95
COPS3-214ENST00000577246 MIXL1Q9H2W2 232 aa9.12□□□□□ -0.95
COPS3-214ENST00000577246 MDFICQ9P1T7 246 aa9.12□□□□□ -0.95
COPS3-214ENST00000577246 H3BP45 60 aa9.11□□□□□ -0.95
COPS3-214ENST00000577246 PAX4O43316 350 aa9.11□□□□□ -0.95
COPS3-214ENST00000577246 DNAH10OSP0CZ25 163 aa9.11□□□□□ -0.95
COPS3-214ENST00000577246 VAMP1P23763 118 aa9.11□□□□□ -0.95
COPS3-214ENST00000577246 FAUP35544 74 aaKnown RBP9.11□□□□□ -0.95
COPS3-214ENST00000577246 SLAQ13239 276 aa9.11□□□□□ -0.95
COPS3-214ENST00000577246 KIR3DS1Q14943 382 aa9.11□□□□□ -0.95
COPS3-214ENST00000577246 CTF1Q16619 201 aa9.11□□□□□ -0.95
COPS3-214ENST00000577246 BPIFA4PQ86YQ2 179 aa9.11□□□□□ -0.95
COPS3-214ENST00000577246 DIRAS2Q96HU8 199 aa9.11□□□□□ -0.95
COPS3-214ENST00000577246 ARL6Q9H0F7 186 aa9.11□□□□□ -0.95
COPS3-214ENST00000577246 ARV1Q9H2C2 271 aa9.11□□□□□ -0.95
COPS3-214ENST00000577246 PXMP4Q9Y6I8 212 aa9.11□□□□□ -0.95
COPS3-214ENST00000577246 LY96Q9Y6Y9 160 aa9.11□□□□□ -0.95
COPS3-214ENST00000577246 TRGV1A0A0A0MS02 117 aa9.1□□□□□ -0.95
COPS3-214ENST00000577246 TRAV12-3A0A0B4J271 114 aa9.1□□□□□ -0.95
COPS3-214ENST00000577246 TMEM70Q9BUB7 260 aa9.1□□□□□ -0.95
COPS3-214ENST00000577246 RSL24D1Q9UHA3 163 aaKnown RBP9.1□□□□□ -0.95
COPS3-214ENST00000577246 FUT9Q9Y231 359 aa9.1□□□□□ -0.95
COPS3-214ENST00000577246 FAT1Q14517 4588 aa9.1□□□□□ -0.95
COPS3-214ENST00000577246 NPIPB6E9PJ23 425 aa9.09□□□□□ -0.95
COPS3-214ENST00000577246 FNDC10F2Z333 226 aa9.09□□□□□ -0.95
COPS3-214ENST00000577246 J3KRW8 73 aa9.09□□□□□ -0.95
COPS3-214ENST00000577246 K7EPK0 472 aa9.09□□□□□ -0.95
COPS3-214ENST00000577246 MRPS12O15235 138 aaKnown RBP9.09□□□□□ -0.95
COPS3-214ENST00000577246 ZNF324O75467 553 aaPredicted RBP9.09□□□□□ -0.95
COPS3-214ENST00000577246 EVI2AP22794 236 aa9.09□□□□□ -0.95
COPS3-214ENST00000577246 MRPL23Q16540 153 aaKnown RBP9.09□□□□□ -0.95
COPS3-214ENST00000577246 C4orf46Q504U0 113 aa9.09□□□□□ -0.95
COPS3-214ENST00000577246 ZBTB8BQ8NAP8 495 aaPredicted RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms