RNA–Protein interactions for RNA: ENST00000575709.5

USP6-206, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 8,185 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-206ENST00000575709 WIPF3A6NGB9 483 aa8.64□□□□□ -1.03
USP6-206ENST00000575709 ZFP2Q6ZN57 461 aa8.64□□□□□ -1.03
USP6-206ENST00000575709 C11orf44Q8N8P7 122 aa8.64□□□□□ -1.03
USP6-206ENST00000575709 RNASE8Q8TDE3 154 aaKnown RBP8.64□□□□□ -1.03
USP6-206ENST00000575709 COX14Q96I36 57 aa8.64□□□□□ -1.03
USP6-206ENST00000575709 IGHV4OR15-8A0A075B7B6 117 aa8.64□□□□□ -1.03
USP6-206ENST00000575709 A0A087WW49 117 aa8.64□□□□□ -1.03
USP6-206ENST00000575709 ARMS2P0C7Q2 107 aa8.64□□□□□ -1.03
USP6-206ENST00000575709 F5P12259 2224 aa8.64□□□□□ -1.03
USP6-206ENST00000575709 FAM186AA6NE01 2351 aa8.64□□□□□ -1.03
USP6-206ENST00000575709 TRAV26-2A0A0B4J265 109 aa8.64□□□□□ -1.03
USP6-206ENST00000575709 SHISA3A0PJX4 238 aa8.64□□□□□ -1.03
USP6-206ENST00000575709 I3L3M4 83 aa8.64□□□□□ -1.03
USP6-206ENST00000575709 IGHMP01871 453 aa8.64□□□□□ -1.03
USP6-206ENST00000575709 ANKRD39Q53RE8 183 aa8.64□□□□□ -1.03
USP6-206ENST00000575709 SIGLEC12Q96PQ1 595 aa8.64□□□□□ -1.03
USP6-206ENST00000575709 PLCH1Q4KWH8 1693 aa8.63□□□□□ -1.03
USP6-206ENST00000575709 IGFL4Q6B9Z1 124 aa8.63□□□□□ -1.03
USP6-206ENST00000575709 TMEM133Q9H2Q1 129 aa8.63□□□□□ -1.03
USP6-206ENST00000575709 TRAV1-1A0A0B4J248 108 aa8.63□□□□□ -1.03
USP6-206ENST00000575709 IGHV3-16A0A0C4DH30 117 aa8.63□□□□□ -1.03
USP6-206ENST00000575709 TM4SF4P48230 202 aa8.63□□□□□ -1.03
USP6-206ENST00000575709 HGFACQ04756 655 aa8.63□□□□□ -1.03
USP6-206ENST00000575709 FAM216BQ8N7L0 139 aa8.63□□□□□ -1.03
USP6-206ENST00000575709 SIGLEC9Q9Y336 463 aa8.63□□□□□ -1.03
USP6-206ENST00000575709 TMEM213A2RRL7 107 aa8.63□□□□□ -1.03
USP6-206ENST00000575709 PRCDQ00LT1 54 aa8.63□□□□□ -1.03
USP6-206ENST00000575709 CFHR3Q02985 330 aa8.63□□□□□ -1.03
USP6-206ENST00000575709 KLF2Q9Y5W3 355 aaPredicted RBP8.63□□□□□ -1.03
USP6-206ENST00000575709 ABCA3Q99758 1704 aa8.63□□□□□ -1.03
USP6-206ENST00000575709 USP54Q70EL1 1684 aa8.63□□□□□ -1.03
USP6-206ENST00000575709 ZNF329Q86UD4 541 aa8.63□□□□□ -1.03
USP6-206ENST00000575709 SPANXB1Q9NS25 103 aaPredicted RBP8.63□□□□□ -1.03
USP6-206ENST00000575709 ADCYAP1P18509 176 aa8.62□□□□□ -1.03
USP6-206ENST00000575709 ID3Q02535 119 aa8.62□□□□□ -1.03
USP6-206ENST00000575709 GFRA4Q9GZZ7 299 aa8.62□□□□□ -1.03
USP6-206ENST00000575709 GREB1LQ9C091 1923 aaPredicted RBP8.62□□□□□ -1.03
USP6-206ENST00000575709 LRP6O75581 1613 aa8.62□□□□□ -1.03
USP6-206ENST00000575709 PLAC1Q9HBJ0 212 aa8.62□□□□□ -1.03
USP6-206ENST00000575709 LYL1P12980 280 aa8.62□□□□□ -1.03
USP6-206ENST00000575709 MORN2Q502X0 79 aa8.62□□□□□ -1.03
USP6-206ENST00000575709 C2orf66Q6UXQ4 117 aa8.62□□□□□ -1.03
USP6-206ENST00000575709 TRPM7Q96QT4 1865 aa8.62□□□□□ -1.03
USP6-206ENST00000575709 RNF152Q8N8N0 203 aa8.62□□□□□ -1.03
USP6-206ENST00000575709 TRPM3Q9HCF6 1732 aaPredicted RBP8.62□□□□□ -1.03
USP6-206ENST00000575709 TRBV25-1A0A075B6N4 114 aa8.62□□□□□ -1.03
USP6-206ENST00000575709 TRAV3A0A0B4J244 114 aa8.62□□□□□ -1.03
USP6-206ENST00000575709 CXCL5P42830 114 aa8.62□□□□□ -1.03
USP6-206ENST00000575709 FOXE3Q13461 319 aa8.62□□□□□ -1.03
USP6-206ENST00000575709 VSIG2Q96IQ7 327 aa8.62□□□□□ -1.03
USP6-206ENST00000575709 LINC00477Q96M19 166 aa8.62□□□□□ -1.03
USP6-206ENST00000575709 SPSB3Q6PJ21 355 aa8.62□□□□□ -1.03
USP6-206ENST00000575709 C8orf49Q96NF6 230 aa8.62□□□□□ -1.03
USP6-206ENST00000575709 PNRC2Q9NPJ4 139 aaKnown RBP8.62□□□□□ -1.03
USP6-206ENST00000575709 MRPL35Q9NZE8 188 aaKnown RBP8.62□□□□□ -1.03
USP6-206ENST00000575709 DDX60LQ5H9U9 1706 aaKnown RBP8.62□□□□□ -1.03
USP6-206ENST00000575709 NREPQ16612 68 aa8.62□□□□□ -1.03
USP6-206ENST00000575709 RNASE13Q5GAN3 156 aaKnown RBP8.62□□□□□ -1.03
USP6-206ENST00000575709 ARFGEF1Q9Y6D6 1849 aa8.61□□□□□ -1.03
USP6-206ENST00000575709 IGHV2-70DA0A0C4DH43 119 aa8.61□□□□□ -1.03
USP6-206ENST00000575709 IGLC7A0M8Q6 106 aa8.61□□□□□ -1.03
USP6-206ENST00000575709 C22orf46C9J442 243 aa8.61□□□□□ -1.03
USP6-206ENST00000575709 PRR4Q16378 134 aa8.61□□□□□ -1.03
USP6-206ENST00000575709 CLPSL2Q6UWE3 100 aa8.61□□□□□ -1.03
USP6-206ENST00000575709 C20orf173Q96LM9 149 aa8.61□□□□□ -1.03
USP6-206ENST00000575709 CYTL1Q9NRR1 136 aa8.61□□□□□ -1.03
USP6-206ENST00000575709 SIVA1O15304 175 aa8.61□□□□□ -1.03
USP6-206ENST00000575709 CR1LQ2VPA4 569 aa8.61□□□□□ -1.03
USP6-206ENST00000575709 LGALS9BQ3B8N2 356 aa8.61□□□□□ -1.03
USP6-206ENST00000575709 LGALS9CQ6DKI2 356 aa8.61□□□□□ -1.03
USP6-206ENST00000575709 FOXI2Q6ZQN5 318 aa8.61□□□□□ -1.03
USP6-206ENST00000575709 COX7B2Q8TF08 81 aa8.61□□□□□ -1.03
USP6-206ENST00000575709 TRAV23DV6A0A075B6W5 121 aa8.61□□□□□ -1.03
USP6-206ENST00000575709 NDUFB1O75438 58 aa8.61□□□□□ -1.03
USP6-206ENST00000575709 CFC1BP0CG36 223 aa8.61□□□□□ -1.03
USP6-206ENST00000575709 CFC1P0CG37 223 aa8.61□□□□□ -1.03
USP6-206ENST00000575709 C15orf32Q32M92 178 aa8.61□□□□□ -1.03
USP6-206ENST00000575709 LAIR2Q6ISS4 152 aa8.61□□□□□ -1.03
USP6-206ENST00000575709 ZNF497Q6ZNH5 498 aa8.61□□□□□ -1.03
USP6-206ENST00000575709 LINC00479Q96M42 142 aa8.61□□□□□ -1.03
USP6-206ENST00000575709 PATJQ8NI35 1801 aa8.61□□□□□ -1.03
USP6-206ENST00000575709 GREB1Q4ZG55 1949 aa8.61□□□□□ -1.03
USP6-206ENST00000575709 A6NED7 52 aa8.61□□□□□ -1.03
USP6-206ENST00000575709 DKK1O94907 266 aa8.61□□□□□ -1.03
USP6-206ENST00000575709 Q8N8P6 123 aa8.61□□□□□ -1.03
USP6-206ENST00000575709 LY96Q9Y6Y9 160 aa8.61□□□□□ -1.03
USP6-206ENST00000575709 COL16A1Q07092 1604 aaPredicted RBP8.61□□□□□ -1.03
USP6-206ENST00000575709 TRBV6-7A0A0A0MS04 114 aa8.61□□□□□ -1.03
USP6-206ENST00000575709 SUPT4H1P63272 117 aaKnown RBP8.61□□□□□ -1.03
USP6-206ENST00000575709 RPP25LQ8N5L8 163 aaKnown RBP8.61□□□□□ -1.03
USP6-206ENST00000575709 LINC00312Q9Y6C7 94 aa8.61□□□□□ -1.03
USP6-206ENST00000575709 YPEL1O60688 119 aa8.6□□□□□ -1.03
USP6-206ENST00000575709 DEFB130BP0DP73 79 aa8.6□□□□□ -1.03
USP6-206ENST00000575709 DEFB130AP0DP74 79 aa8.6□□□□□ -1.03
USP6-206ENST00000575709 YPEL2Q96QA6 119 aa8.6□□□□□ -1.03
USP6-206ENST00000575709 IGHV2OR16-5A0A0B4J2B6 119 aa8.6□□□□□ -1.03
USP6-206ENST00000575709 BUB3O43684 328 aa8.6□□□□□ -1.03
USP6-206ENST00000575709 IGKV4-1P06312 121 aa8.6□□□□□ -1.03
USP6-206ENST00000575709 C3orf22Q8N5N4 141 aa8.6□□□□□ -1.03
USP6-206ENST00000575709 FAM236DA0A1B0GTK5 79 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms