RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 LYZL2Q7Z4W2 148 aa6.17□□□□□ -1.42
SMG6-218ENST00000575454 RPUSD4Q96CM3 377 aaKnown RBP6.17□□□□□ -1.42
SMG6-218ENST00000575454 SHANK2-AS3Q9BTD1 123 aa6.17□□□□□ -1.42
SMG6-218ENST00000575454 EXTL2Q9UBQ6 330 aa6.17□□□□□ -1.42
SMG6-218ENST00000575454 HIGD1AQ9Y241 93 aa6.17□□□□□ -1.42
SMG6-218ENST00000575454 RNF213Q63HN8 5207 aa6.16□□□□□ -1.42
SMG6-218ENST00000575454 TRGV2A0A075B6R0 118 aa6.16□□□□□ -1.42
SMG6-218ENST00000575454 A0A087WTM6 91 aa6.16□□□□□ -1.42
SMG6-218ENST00000575454 A0A087WXM4 84 aa6.16□□□□□ -1.42
SMG6-218ENST00000575454 A0A087X0K7 114 aa6.16□□□□□ -1.42
SMG6-218ENST00000575454 A0A096LPF7 62 aa6.16□□□□□ -1.42
SMG6-218ENST00000575454 HYPMO75409 117 aa6.16□□□□□ -1.42
SMG6-218ENST00000575454 SMR3BP02814 79 aaPredicted RBP6.16□□□□□ -1.42
SMG6-218ENST00000575454 AKAIN1P0CW23 69 aa6.16□□□□□ -1.42
SMG6-218ENST00000575454 CXCL2P19875 107 aa6.16□□□□□ -1.42
SMG6-218ENST00000575454 NCS1P62166 190 aa6.16□□□□□ -1.42
SMG6-218ENST00000575454 AKR1C1Q04828 323 aa6.16□□□□□ -1.42
SMG6-218ENST00000575454 MDFICQ9P1T7 246 aa6.16□□□□□ -1.42
SMG6-218ENST00000575454 SCP2D1Q9UJQ7 156 aa6.16□□□□□ -1.42
SMG6-218ENST00000575454 NACAE9PAV3 2078 aa6.16□□□□□ -1.42
SMG6-218ENST00000575454 DUXBA0A1W2PPF3 345 aa6.15□□□□□ -1.42
SMG6-218ENST00000575454 H3BRN7 92 aa6.15□□□□□ -1.42
SMG6-218ENST00000575454 NXPH4O95158 308 aa6.15□□□□□ -1.42
SMG6-218ENST00000575454 IL5P05113 134 aa6.15□□□□□ -1.42
SMG6-218ENST00000575454 IAPPP10997 89 aa6.15□□□□□ -1.42
SMG6-218ENST00000575454 SLC25A6P12236 298 aa6.15□□□□□ -1.42
SMG6-218ENST00000575454 GATA2P23769 480 aaPredicted RBP6.15□□□□□ -1.42
SMG6-218ENST00000575454 VBP1P61758 197 aa6.15□□□□□ -1.42
SMG6-218ENST00000575454 SELENOTP62341 195 aa6.15□□□□□ -1.42
SMG6-218ENST00000575454 SLAQ13239 276 aa6.15□□□□□ -1.42
SMG6-218ENST00000575454 SERTAD4-AS1Q5TG53 156 aa6.15□□□□□ -1.42
SMG6-218ENST00000575454 TMED4Q7Z7H5 227 aa6.15□□□□□ -1.42
SMG6-218ENST00000575454 CCDC190Q86UF4 302 aa6.15□□□□□ -1.42
SMG6-218ENST00000575454 OR51S1Q8NGJ8 323 aa6.15□□□□□ -1.42
SMG6-218ENST00000575454 TMPRSS5Q9H3S3 457 aa6.15□□□□□ -1.42
SMG6-218ENST00000575454 ICOSQ9Y6W8 199 aa6.15□□□□□ -1.42
SMG6-218ENST00000575454 PITX3O75364 302 aa6.14□□□□□ -1.43
SMG6-218ENST00000575454 ANXA7P20073 488 aaKnown RBP6.14□□□□□ -1.43
SMG6-218ENST00000575454 FUSP35637 526 aaKnown RBP eCLIP6.14□□□□□ -1.43
SMG6-218ENST00000575454 C4orf46Q504U0 113 aa6.14□□□□□ -1.43
SMG6-218ENST00000575454 GFI1BQ5VTD9 330 aa6.14□□□□□ -1.43
SMG6-218ENST00000575454 FAAP20Q6NZ36 180 aa6.14□□□□□ -1.43
SMG6-218ENST00000575454 LCN15Q6UWW0 184 aa6.14□□□□□ -1.43
SMG6-218ENST00000575454 CYP2G1PQ6ZSU1 146 aa6.14□□□□□ -1.43
SMG6-218ENST00000575454 CLVS1Q8IUQ0 354 aaPredicted RBP6.14□□□□□ -1.43
SMG6-218ENST00000575454 ZNF680Q8NEM1 530 aa6.14□□□□□ -1.43
SMG6-218ENST00000575454 VSIG2Q96IQ7 327 aa6.14□□□□□ -1.43
SMG6-218ENST00000575454 PYGO2Q9BRQ0 406 aa6.14□□□□□ -1.43
SMG6-218ENST00000575454 TMEM70Q9BUB7 260 aa6.14□□□□□ -1.43
SMG6-218ENST00000575454 FUNDC2Q9BWH2 189 aa6.14□□□□□ -1.43
SMG6-218ENST00000575454 PRR13Q9NZ81 148 aa6.14□□□□□ -1.43
SMG6-218ENST00000575454 RABL2AQ9UBK7 228 aaPredicted RBP6.14□□□□□ -1.43
SMG6-218ENST00000575454 RABL2BQ9UNT1 228 aa6.14□□□□□ -1.43
SMG6-218ENST00000575454 LY96Q9Y6Y9 160 aa6.14□□□□□ -1.43
SMG6-218ENST00000575454 PRSS46E5RG02 174 aa6.13□□□□□ -1.43
SMG6-218ENST00000575454 PAX4O43316 350 aa6.13□□□□□ -1.43
SMG6-218ENST00000575454 OR5G3P0C626 314 aa6.13□□□□□ -1.43
SMG6-218ENST00000575454 EVI2AP22794 236 aa6.13□□□□□ -1.43
SMG6-218ENST00000575454 LEPP41159 167 aa6.13□□□□□ -1.43
SMG6-218ENST00000575454 PLP1P60201 277 aa6.13□□□□□ -1.43
SMG6-218ENST00000575454 PXDC1Q5TGL8 231 aa6.13□□□□□ -1.43
SMG6-218ENST00000575454 TMEM182Q6ZP80 229 aaPredicted RBP6.13□□□□□ -1.43
SMG6-218ENST00000575454 Q6ZTI0 123 aa6.13□□□□□ -1.43
SMG6-218ENST00000575454 ACOT7LQ6ZUV0 252 aa6.13□□□□□ -1.43
SMG6-218ENST00000575454 SYT8Q8NBV8 401 aa6.13□□□□□ -1.43
SMG6-218ENST00000575454 NTN5Q8WTR8 489 aaPredicted RBP6.13□□□□□ -1.43
SMG6-218ENST00000575454 SMIM4Q8WVI0 70 aa6.13□□□□□ -1.43
SMG6-218ENST00000575454 ODF3Q96PU9 254 aa6.13□□□□□ -1.43
SMG6-218ENST00000575454 SLC50A1Q9BRV3 221 aa6.13□□□□□ -1.43
SMG6-218ENST00000575454 MSRB1Q9NZV6 116 aa6.13□□□□□ -1.43
SMG6-218ENST00000575454 STRAPQ9Y3F4 350 aaKnown RBP6.13□□□□□ -1.43
SMG6-218ENST00000575454 IGLV5-52A0A0A0MRZ9 124 aa6.12□□□□□ -1.43
SMG6-218ENST00000575454 SMCO3A2RU48 225 aa6.12□□□□□ -1.43
SMG6-218ENST00000575454 KRTAP29-1A8MX34 341 aaPredicted RBP6.12□□□□□ -1.43
SMG6-218ENST00000575454 NPIPB6E9PJ23 425 aa6.12□□□□□ -1.43
SMG6-218ENST00000575454 SYNGR2O43760 224 aa6.12□□□□□ -1.43
SMG6-218ENST00000575454 ZNF324O75467 553 aaPredicted RBP6.12□□□□□ -1.43
SMG6-218ENST00000575454 ATP6V1G2O95670 118 aa6.12□□□□□ -1.43
SMG6-218ENST00000575454 PLA2G1BP04054 148 aaKnown RBP6.12□□□□□ -1.43
SMG6-218ENST00000575454 LINC00869P0C866 280 aa6.12□□□□□ -1.43
SMG6-218ENST00000575454 DNAH10OSP0CZ25 163 aa6.12□□□□□ -1.43
SMG6-218ENST00000575454 MRPL23Q16540 153 aaKnown RBP6.12□□□□□ -1.43
SMG6-218ENST00000575454 SPANXN5Q5MJ07 72 aa6.12□□□□□ -1.43
SMG6-218ENST00000575454 C10orf126Q8N4M7 172 aa6.12□□□□□ -1.43
SMG6-218ENST00000575454 ZBTB8BQ8NAP8 495 aaPredicted RBP6.12□□□□□ -1.43
SMG6-218ENST00000575454 ZNF331Q9NQX6 463 aaPredicted RBP6.12□□□□□ -1.43
SMG6-218ENST00000575454 PRO0255Q9UI72 69 aa6.12□□□□□ -1.43
SMG6-218ENST00000575454 FUT9Q9Y231 359 aa6.12□□□□□ -1.43
SMG6-218ENST00000575454 TRGV1A0A0A0MS02 117 aa6.11□□□□□ -1.43
SMG6-218ENST00000575454 TRAV12-3A0A0B4J271 114 aa6.11□□□□□ -1.43
SMG6-218ENST00000575454 PMS2P5A8MQ11 134 aa6.11□□□□□ -1.43
SMG6-218ENST00000575454 WRBO00258 174 aa6.11□□□□□ -1.43
SMG6-218ENST00000575454 CTDSPLO15194 276 aa6.11□□□□□ -1.43
SMG6-218ENST00000575454 SLC25A5P05141 298 aaKnown RBP6.11□□□□□ -1.43
SMG6-218ENST00000575454 KIR3DS1Q14943 382 aa6.11□□□□□ -1.43
SMG6-218ENST00000575454 LYPD5Q6UWN5 251 aa6.11□□□□□ -1.43
SMG6-218ENST00000575454 BPIFA4PQ86YQ2 179 aa6.11□□□□□ -1.43
SMG6-218ENST00000575454 LRTM2Q8N967 370 aa6.11□□□□□ -1.43
SMG6-218ENST00000575454 LINC00467Q9BRT7 94 aa6.11□□□□□ -1.43
SMG6-218ENST00000575454 ARL6Q9H0F7 186 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms