RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 GAGE2BQ13066 116 aa4.91□□□□□ -1.62
CHD3-213ENST00000571249 ICAM4Q14773 271 aa4.91□□□□□ -1.62
CHD3-213ENST00000571249 ZNF124Q15973 351 aa4.91□□□□□ -1.62
CHD3-213ENST00000571249 ATP6V1FQ16864 119 aa4.91□□□□□ -1.62
CHD3-213ENST00000571249 IZUMO4Q1ZYL8 232 aa4.91□□□□□ -1.62
CHD3-213ENST00000571249 GAGE2EQ4V326 116 aa4.91□□□□□ -1.62
CHD3-213ENST00000571249 RPL39P5Q59GN2 51 aa4.91□□□□□ -1.62
CHD3-213ENST00000571249 C10orf91Q5T1B1 145 aa4.91□□□□□ -1.62
CHD3-213ENST00000571249 GAGE2AQ6NT46 116 aa4.91□□□□□ -1.62
CHD3-213ENST00000571249 DPPA3Q6W0C5 159 aa4.91□□□□□ -1.62
CHD3-213ENST00000571249 H2BFWTQ7Z2G1 175 aa4.91□□□□□ -1.62
CHD3-213ENST00000571249 STX12Q86Y82 276 aa4.91□□□□□ -1.62
CHD3-213ENST00000571249 ZNF383Q8NA42 475 aa4.91□□□□□ -1.62
CHD3-213ENST00000571249 OR5C1Q8NGR4 320 aa4.91□□□□□ -1.62
CHD3-213ENST00000571249 OR4S2Q8NH73 311 aa4.91□□□□□ -1.62
CHD3-213ENST00000571249 ATP5SQ99766 215 aa4.91□□□□□ -1.62
CHD3-213ENST00000571249 PSMG3Q9BT73 122 aaPredicted RBP4.91□□□□□ -1.62
CHD3-213ENST00000571249 SMIM3Q9BZL3 60 aa4.91□□□□□ -1.62
CHD3-213ENST00000571249 RBKSQ9H477 322 aa4.91□□□□□ -1.62
CHD3-213ENST00000571249 PSENENQ9NZ42 101 aa4.91□□□□□ -1.62
CHD3-213ENST00000571249 GAGE2DQ9UEU5 116 aa4.91□□□□□ -1.62
CHD3-213ENST00000571249 LPAP08519 4548 aa4.91□□□□□ -1.62
CHD3-213ENST00000571249 ZNF705EA8MWA4 302 aaPredicted RBP4.9□□□□□ -1.63
CHD3-213ENST00000571249 GGCTO75223 188 aaKnown RBP4.9□□□□□ -1.63
CHD3-213ENST00000571249 CST7O76096 145 aa4.9□□□□□ -1.63
CHD3-213ENST00000571249 HRASP01112 189 aa4.9□□□□□ -1.63
CHD3-213ENST00000571249 OXTP01178 125 aa4.9□□□□□ -1.63
CHD3-213ENST00000571249 CD5P06127 495 aa4.9□□□□□ -1.63
CHD3-213ENST00000571249 OR9G9P0C7N8 305 aa4.9□□□□□ -1.63
CHD3-213ENST00000571249 CT45A6P0DMU7 189 aa4.9□□□□□ -1.63
CHD3-213ENST00000571249 CT45A5P0DMU8 189 aa4.9□□□□□ -1.63
CHD3-213ENST00000571249 CT45A7P0DMV0 189 aa4.9□□□□□ -1.63
CHD3-213ENST00000571249 ATP6V0CP27449 155 aa4.9□□□□□ -1.63
CHD3-213ENST00000571249 ATP5IP56385 69 aaPredicted RBP4.9□□□□□ -1.63
CHD3-213ENST00000571249 SPCS3P61009 180 aa4.9□□□□□ -1.63
CHD3-213ENST00000571249 HBG1P69891 147 aa4.9□□□□□ -1.63
CHD3-213ENST00000571249 HBG2P69892 147 aa4.9□□□□□ -1.63
CHD3-213ENST00000571249 ARL16Q0P5N6 197 aa4.9□□□□□ -1.63
CHD3-213ENST00000571249 UBE2V1Q13404 147 aa4.9□□□□□ -1.63
CHD3-213ENST00000571249 PSG5Q15238 335 aa4.9□□□□□ -1.63
CHD3-213ENST00000571249 PXDC1Q5TGL8 231 aa4.9□□□□□ -1.63
CHD3-213ENST00000571249 LINC00052Q96N35 136 aa4.9□□□□□ -1.63
CHD3-213ENST00000571249 TM2D2Q9BX73 214 aa4.9□□□□□ -1.63
CHD3-213ENST00000571249 SMDT1Q9H4I9 107 aa4.9□□□□□ -1.63
CHD3-213ENST00000571249 TMEM14BQ9NUH8 114 aa4.9□□□□□ -1.63
CHD3-213ENST00000571249 CELA1Q9UNI1 258 aa4.9□□□□□ -1.63
CHD3-213ENST00000571249 TIMM9Q9Y5J7 89 aa4.9□□□□□ -1.63
CHD3-213ENST00000571249 DMRT1Q9Y5R6 373 aa4.9□□□□□ -1.63
CHD3-213ENST00000571249 TRAV1-1A0A0B4J248 108 aa4.89□□□□□ -1.63
CHD3-213ENST00000571249 TMEM218A2RU14 115 aa4.89□□□□□ -1.63
CHD3-213ENST00000571249 INS-IGF2F8WCM5 200 aa4.89□□□□□ -1.63
CHD3-213ENST00000571249 H0Y8G0 127 aa4.89□□□□□ -1.63
CHD3-213ENST00000571249 RHODO00212 210 aa4.89□□□□□ -1.63
CHD3-213ENST00000571249 IFNA5P01569 189 aa4.89□□□□□ -1.63
CHD3-213ENST00000571249 PRH1P02810 166 aa4.89□□□□□ -1.63
CHD3-213ENST00000571249 APELAP0DMC3 54 aa4.89□□□□□ -1.63
CHD3-213ENST00000571249 M6PRP20645 277 aa4.89□□□□□ -1.63
CHD3-213ENST00000571249 ERVK-16P61578 105 aa4.89□□□□□ -1.63
CHD3-213ENST00000571249 HSPE1P61604 102 aaKnown RBP4.89□□□□□ -1.63
CHD3-213ENST00000571249 RHOGP84095 191 aa4.89□□□□□ -1.63
CHD3-213ENST00000571249 SERF2P84101 59 aa4.89□□□□□ -1.63
CHD3-213ENST00000571249 CLINT1Q14677 625 aa4.89□□□□□ -1.63
CHD3-213ENST00000571249 OR2B11Q5JQS5 317 aa4.89□□□□□ -1.63
CHD3-213ENST00000571249 Q6ZRG5 221 aa4.89□□□□□ -1.63
CHD3-213ENST00000571249 GPHB5Q86YW7 130 aa4.89□□□□□ -1.63
CHD3-213ENST00000571249 C15orf53Q8NAA6 179 aa4.89□□□□□ -1.63
CHD3-213ENST00000571249 OR2G3Q8NGZ4 309 aa4.89□□□□□ -1.63
CHD3-213ENST00000571249 OSR1Q8TAX0 266 aaPredicted RBP4.89□□□□□ -1.63
CHD3-213ENST00000571249 DTD1Q8TEA8 209 aa4.89□□□□□ -1.63
CHD3-213ENST00000571249 PINX1Q96BK5 328 aaKnown RBP4.89□□□□□ -1.63
CHD3-213ENST00000571249 GGACTQ9BVM4 153 aa4.89□□□□□ -1.63
CHD3-213ENST00000571249 QTRT1Q9BXR0 403 aaKnown RBP4.89□□□□□ -1.63
CHD3-213ENST00000571249 TMEM231Q9H6L2 316 aa4.89□□□□□ -1.63
CHD3-213ENST00000571249 DNAJC4Q9NNZ3 241 aa4.89□□□□□ -1.63
CHD3-213ENST00000571249 BET1LQ9NYM9 111 aa4.89□□□□□ -1.63
CHD3-213ENST00000571249 ZNF257Q9Y2Q1 563 aa4.89□□□□□ -1.63
CHD3-213ENST00000571249 CARHSP1Q9Y2V2 147 aaKnown RBP4.89□□□□□ -1.63
CHD3-213ENST00000571249 C15orf61A6NNL5 157 aa4.88□□□□□ -1.63
CHD3-213ENST00000571249 A8MWP6 167 aa4.88□□□□□ -1.63
CHD3-213ENST00000571249 PRSS46E5RG02 174 aa4.88□□□□□ -1.63
CHD3-213ENST00000571249 FNDC10F2Z333 226 aa4.88□□□□□ -1.63
CHD3-213ENST00000571249 H0YJW9 148 aa4.88□□□□□ -1.63
CHD3-213ENST00000571249 UPK2O00526 184 aa4.88□□□□□ -1.63
CHD3-213ENST00000571249 METTL15P1P0C7V9 234 aa4.88□□□□□ -1.63
CHD3-213ENST00000571249 IAPPP10997 89 aa4.88□□□□□ -1.63
CHD3-213ENST00000571249 MIFP14174 115 aa4.88□□□□□ -1.63
CHD3-213ENST00000571249 NPY1RP25929 384 aa4.88□□□□□ -1.63
CHD3-213ENST00000571249 SNCAP37840 140 aa4.88□□□□□ -1.63
CHD3-213ENST00000571249 SSTP61278 116 aa4.88□□□□□ -1.63
CHD3-213ENST00000571249 SSBP2P81877 361 aaPredicted RBP4.88□□□□□ -1.63
CHD3-213ENST00000571249 SLC38A11Q08AI6 406 aa4.88□□□□□ -1.63
CHD3-213ENST00000571249 RTL8BQ17RB0 113 aa4.88□□□□□ -1.63
CHD3-213ENST00000571249 FAM106AQ4KMX7 169 aa4.88□□□□□ -1.63
CHD3-213ENST00000571249 SPANXN5Q5MJ07 72 aa4.88□□□□□ -1.63
CHD3-213ENST00000571249 OR4A47Q6IF82 309 aa4.88□□□□□ -1.63
CHD3-213ENST00000571249 SPSB3Q6PJ21 355 aa4.88□□□□□ -1.63
CHD3-213ENST00000571249 PDPNQ86YL7 162 aa4.88□□□□□ -1.63
CHD3-213ENST00000571249 HSD17B11Q8NBQ5 300 aa4.88□□□□□ -1.63
CHD3-213ENST00000571249 BPIFCQ8NFQ6 507 aa4.88□□□□□ -1.63
CHD3-213ENST00000571249 OR4A16Q8NH70 328 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 800.5 ms