RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 C2CD3Q4AC94 2353 aa4.99□□□□□ -1.61
CTDNEP1-204ENST00000570484 TNCP24821 2201 aa4.99□□□□□ -1.61
CTDNEP1-204ENST00000570484 OR4C46A6NHA9 309 aa4.99□□□□□ -1.61
CTDNEP1-204ENST00000570484 EIF3GO75821 320 aaKnown RBP eCLIP4.99□□□□□ -1.61
CTDNEP1-204ENST00000570484 APOHP02749 345 aaPredicted RBP4.99□□□□□ -1.61
CTDNEP1-204ENST00000570484 CSN3P07498 182 aa4.99□□□□□ -1.61
CTDNEP1-204ENST00000570484 PYYP10082 97 aa4.99□□□□□ -1.61
CTDNEP1-204ENST00000570484 HIST1H1EP10412 219 aaKnown RBP4.99□□□□□ -1.61
CTDNEP1-204ENST00000570484 EDN2P20800 178 aa4.99□□□□□ -1.61
CTDNEP1-204ENST00000570484 GCHFRP30047 84 aa4.99□□□□□ -1.61
CTDNEP1-204ENST00000570484 ID1P41134 155 aa4.99□□□□□ -1.61
CTDNEP1-204ENST00000570484 PSMB3P49720 205 aa4.99□□□□□ -1.61
CTDNEP1-204ENST00000570484 SNRPD3P62318 126 aaKnown RBP4.99□□□□□ -1.61
CTDNEP1-204ENST00000570484 PDE6HQ13956 83 aa4.99□□□□□ -1.61
CTDNEP1-204ENST00000570484 ZNF726P1Q15940 193 aa4.99□□□□□ -1.61
CTDNEP1-204ENST00000570484 GUCA2BQ16661 112 aa4.99□□□□□ -1.61
CTDNEP1-204ENST00000570484 KRTAP21-3Q3LHN1 58 aa4.99□□□□□ -1.61
CTDNEP1-204ENST00000570484 PRR31Q5SQ13 230 aa4.99□□□□□ -1.61
CTDNEP1-204ENST00000570484 SSX7Q7RTT5 188 aa4.99□□□□□ -1.61
CTDNEP1-204ENST00000570484 OR2K2Q8NGT1 345 aa4.99□□□□□ -1.61
CTDNEP1-204ENST00000570484 GLMPQ8WWB7 406 aa4.99□□□□□ -1.61
CTDNEP1-204ENST00000570484 ZNF414Q96IQ9 312 aa4.99□□□□□ -1.61
CTDNEP1-204ENST00000570484 C16orf92Q96LL3 132 aa4.99□□□□□ -1.61
CTDNEP1-204ENST00000570484 CLUHP3Q96NS8 147 aa4.99□□□□□ -1.61
CTDNEP1-204ENST00000570484 SLC50A1Q9BRV3 221 aa4.99□□□□□ -1.61
CTDNEP1-204ENST00000570484 AAMDCQ9H7C9 122 aa4.99□□□□□ -1.61
CTDNEP1-204ENST00000570484 SIGLEC8Q9NYZ4 499 aa4.99□□□□□ -1.61
CTDNEP1-204ENST00000570484 GNG13Q9P2W3 67 aa4.99□□□□□ -1.61
CTDNEP1-204ENST00000570484 MLXQ9UH92 298 aa4.99□□□□□ -1.61
CTDNEP1-204ENST00000570484 A0A087X0K7 114 aa4.98□□□□□ -1.61
CTDNEP1-204ENST00000570484 TRAV25A0A0B4J276 109 aa4.98□□□□□ -1.61
CTDNEP1-204ENST00000570484 H3BTX0 84 aa4.98□□□□□ -1.61
CTDNEP1-204ENST00000570484 NMBP08949 121 aa4.98□□□□□ -1.61
CTDNEP1-204ENST00000570484 TAGLN2P37802 199 aaKnown RBP4.98□□□□□ -1.61
CTDNEP1-204ENST00000570484 TFPI2P48307 235 aa4.98□□□□□ -1.61
CTDNEP1-204ENST00000570484 UBE2G2P60604 165 aa4.98□□□□□ -1.61
CTDNEP1-204ENST00000570484 PSG9Q00887 426 aa4.98□□□□□ -1.61
CTDNEP1-204ENST00000570484 CD300EQ496F6 205 aaPredicted RBP4.98□□□□□ -1.61
CTDNEP1-204ENST00000570484 GTSCR1Q86UQ5 136 aa4.98□□□□□ -1.61
CTDNEP1-204ENST00000570484 TMEM61Q8N0U2 210 aa4.98□□□□□ -1.61
CTDNEP1-204ENST00000570484 GBGT1Q8N5D6 347 aa4.98□□□□□ -1.61
CTDNEP1-204ENST00000570484 CMTM2Q8TAZ6 248 aa4.98□□□□□ -1.61
CTDNEP1-204ENST00000570484 PCNPQ8WW12 178 aaKnown RBP4.98□□□□□ -1.61
CTDNEP1-204ENST00000570484 MBD3L1Q8WWY6 194 aa4.98□□□□□ -1.61
CTDNEP1-204ENST00000570484 FAM167A-AS1Q96KT0 104 aa4.98□□□□□ -1.61
CTDNEP1-204ENST00000570484 SPAG8Q99932 426 aaPredicted RBP4.98□□□□□ -1.61
CTDNEP1-204ENST00000570484 SELENOKQ9Y6D0 94 aa4.98□□□□□ -1.61
CTDNEP1-204ENST00000570484 JMJD1CQ15652 2540 aa4.98□□□□□ -1.61
CTDNEP1-204ENST00000570484 TRBV19A0A075B6N1 114 aa4.97□□□□□ -1.61
CTDNEP1-204ENST00000570484 TRAV2A0A0B4J234 112 aa4.97□□□□□ -1.61
CTDNEP1-204ENST00000570484 TRAV1-1A0A0B4J248 108 aa4.97□□□□□ -1.61
CTDNEP1-204ENST00000570484 TSPAN4O14817 238 aa4.97□□□□□ -1.61
CTDNEP1-204ENST00000570484 ZNF253O75346 499 aa4.97□□□□□ -1.61
CTDNEP1-204ENST00000570484 IGLV1-51P01701 117 aa4.97□□□□□ -1.61
CTDNEP1-204ENST00000570484 SNRPCP09234 159 aaKnown RBP4.97□□□□□ -1.61
CTDNEP1-204ENST00000570484 NBEAP1P0C6P0 100 aa4.97□□□□□ -1.61
CTDNEP1-204ENST00000570484 IGLC2P0DOY2 106 aa4.97□□□□□ -1.61
CTDNEP1-204ENST00000570484 BCL2P10415 239 aa4.97□□□□□ -1.61
CTDNEP1-204ENST00000570484 IGLL1P15814 213 aa4.97□□□□□ -1.61
CTDNEP1-204ENST00000570484 CSN1S1P47710 185 aa4.97□□□□□ -1.61
CTDNEP1-204ENST00000570484 IFITM2Q01629 132 aa4.97□□□□□ -1.61
CTDNEP1-204ENST00000570484 DEFB114Q30KQ6 69 aa4.97□□□□□ -1.61
CTDNEP1-204ENST00000570484 CLLU1Q5K131 121 aa4.97□□□□□ -1.61
CTDNEP1-204ENST00000570484 CST9LP1Q5W188 147 aa4.97□□□□□ -1.61
CTDNEP1-204ENST00000570484 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.97□□□□□ -1.61
CTDNEP1-204ENST00000570484 SPATA3Q8NHX4 192 aa4.97□□□□□ -1.61
CTDNEP1-204ENST00000570484 FXYD5Q96DB9 178 aa4.97□□□□□ -1.61
CTDNEP1-204ENST00000570484 NKX6-2Q9C056 277 aaPredicted RBP4.97□□□□□ -1.61
CTDNEP1-204ENST00000570484 EIF5A2Q9GZV4 153 aaKnown RBP4.97□□□□□ -1.61
CTDNEP1-204ENST00000570484 MS4A6AQ9H2W1 248 aa4.97□□□□□ -1.61
CTDNEP1-204ENST00000570484 CLEC5AQ9NY25 188 aa4.97□□□□□ -1.61
CTDNEP1-204ENST00000570484 ZMAT5Q9UDW3 170 aaKnown RBP4.97□□□□□ -1.61
CTDNEP1-204ENST00000570484 RPH3ALQ9UNE2 315 aa4.97□□□□□ -1.61
CTDNEP1-204ENST00000570484 ARL2-SNX15V9GYD0 113 aa4.97□□□□□ -1.61
CTDNEP1-204ENST00000570484 PLXNB1O43157 2135 aa4.97□□□□□ -1.61
CTDNEP1-204ENST00000570484 ZFHX3Q15911 3703 aa4.96□□□□□ -1.61
CTDNEP1-204ENST00000570484 H3BQ15 152 aa4.96□□□□□ -1.62
CTDNEP1-204ENST00000570484 K7EQM0 130 aa4.96□□□□□ -1.62
CTDNEP1-204ENST00000570484 SLC17A3O00476 420 aa4.96□□□□□ -1.62
CTDNEP1-204ENST00000570484 ISLRO14498 428 aa4.96□□□□□ -1.62
CTDNEP1-204ENST00000570484 PAGE4O60829 102 aa4.96□□□□□ -1.62
CTDNEP1-204ENST00000570484 SLC25A5P05141 298 aaKnown RBP4.96□□□□□ -1.62
CTDNEP1-204ENST00000570484 RANP62826 216 aaKnown RBP4.96□□□□□ -1.62
CTDNEP1-204ENST00000570484 HAGHQ16775 308 aa4.96□□□□□ -1.62
CTDNEP1-204ENST00000570484 PSMG4Q5JS54 123 aa4.96□□□□□ -1.62
CTDNEP1-204ENST00000570484 TOR2AQ5JU69 321 aa4.96□□□□□ -1.62
CTDNEP1-204ENST00000570484 ADAMTSL5Q6ZMM2 481 aa4.96□□□□□ -1.62
CTDNEP1-204ENST00000570484 LYPD1Q8N2G4 141 aa4.96□□□□□ -1.62
CTDNEP1-204ENST00000570484 C5orf17Q8NAS9 161 aa4.96□□□□□ -1.62
CTDNEP1-204ENST00000570484 ZNF738Q8NE65 137 aa4.96□□□□□ -1.62
CTDNEP1-204ENST00000570484 ZNF503Q96F45 646 aa4.96□□□□□ -1.62
CTDNEP1-204ENST00000570484 LINC00052Q96N35 136 aa4.96□□□□□ -1.62
CTDNEP1-204ENST00000570484 TCEAL7Q9BRU2 100 aa4.96□□□□□ -1.62
CTDNEP1-204ENST00000570484 Q9H3A6 140 aa4.96□□□□□ -1.62
CTDNEP1-204ENST00000570484 TMPRSS5Q9H3S3 457 aa4.96□□□□□ -1.62
CTDNEP1-204ENST00000570484 OTORQ9NRC9 128 aa4.96□□□□□ -1.62
CTDNEP1-204ENST00000570484 ZNF586Q9NXT0 402 aa4.96□□□□□ -1.62
CTDNEP1-204ENST00000570484 NIPBLQ6KC79 2804 aaeCLIP4.95□□□□□ -1.62
CTDNEP1-204ENST00000570484 A0A1W2PRE2 83 aa4.95□□□□□ -1.62
CTDNEP1-204ENST00000570484 OR11H12B2RN74 326 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms