RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 LRBAP50851 2863 aa12.2□□□□□ -0.46
USP43-202ENST00000570475 PSMB11A5LHX3 300 aa12.2□□□□□ -0.46
USP43-202ENST00000570475 TMEM30BQ3MIR4 351 aa12.2□□□□□ -0.46
USP43-202ENST00000570475 TMEM155Q4W5P6 130 aa12.2□□□□□ -0.46
USP43-202ENST00000570475 COX11Q9Y6N1 276 aa12.2□□□□□ -0.46
USP43-202ENST00000570475 IGKV3-7A0A075B6H7 116 aa12.19□□□□□ -0.46
USP43-202ENST00000570475 IFI27P40305 119 aaPredicted RBP12.19□□□□□ -0.46
USP43-202ENST00000570475 ECSCRQ19T08 205 aa12.19□□□□□ -0.46
USP43-202ENST00000570475 AMN1Q8IY45 258 aa12.19□□□□□ -0.46
USP43-202ENST00000570475 RNF125Q96EQ8 232 aa12.19□□□□□ -0.46
USP43-202ENST00000570475 OTORQ9NRC9 128 aa12.19□□□□□ -0.46
USP43-202ENST00000570475 C2orf70A6NJV1 201 aa12.19□□□□□ -0.46
USP43-202ENST00000570475 CEACAM8P31997 349 aaPredicted RBP12.19□□□□□ -0.46
USP43-202ENST00000570475 CKS2P33552 79 aa12.19□□□□□ -0.46
USP43-202ENST00000570475 BCL6BQ8N143 479 aaPredicted RBP12.19□□□□□ -0.46
USP43-202ENST00000570475 D6R8Y8 96 aa12.19□□□□□ -0.46
USP43-202ENST00000570475 RELQ04864 619 aaPredicted RBP12.19□□□□□ -0.46
USP43-202ENST00000570475 RBPJQ06330 500 aa12.19□□□□□ -0.46
USP43-202ENST00000570475 LDLRAD2Q5SZI1 272 aa12.19□□□□□ -0.46
USP43-202ENST00000570475 PTPRBP23467 1997 aa12.18□□□□□ -0.46
USP43-202ENST00000570475 BUB1B-PAK6H3BSN5 160 aa12.18□□□□□ -0.46
USP43-202ENST00000570475 GRNP28799 593 aaKnown RBP12.18□□□□□ -0.46
USP43-202ENST00000570475 ATP5L2Q7Z4Y8 100 aa12.18□□□□□ -0.46
USP43-202ENST00000570475 RAI1Q7Z5J4 1906 aaPredicted RBP12.18□□□□□ -0.46
USP43-202ENST00000570475 FBLL1A6NHQ2 334 aaKnown RBP12.18□□□□□ -0.46
USP43-202ENST00000570475 NUP37Q8NFH4 326 aa12.18□□□□□ -0.46
USP43-202ENST00000570475 PRSS1P07477 247 aa12.17□□□□□ -0.46
USP43-202ENST00000570475 IGLC1P0CG04 106 aa12.17□□□□□ -0.46
USP43-202ENST00000570475 GP9P14770 177 aa12.17□□□□□ -0.46
USP43-202ENST00000570475 FCER1GP30273 86 aa12.17□□□□□ -0.46
USP43-202ENST00000570475 LYZL1Q6UWQ5 148 aa12.17□□□□□ -0.46
USP43-202ENST00000570475 THAP8Q8NA92 274 aa12.17□□□□□ -0.46
USP43-202ENST00000570475 NCOR1P1Q9H4R4 102 aa12.17□□□□□ -0.46
USP43-202ENST00000570475 UBE2V1Q13404 147 aa12.17□□□□□ -0.46
USP43-202ENST00000570475 PIP4P1Q86T03 277 aa12.17□□□□□ -0.46
USP43-202ENST00000570475 OR10AG1Q8NH19 301 aa12.17□□□□□ -0.46
USP43-202ENST00000570475 APOBEC3AP31941 199 aaPredicted RBP12.17□□□□□ -0.46
USP43-202ENST00000570475 CACNG7P62955 275 aa12.17□□□□□ -0.46
USP43-202ENST00000570475 RASL11AQ6T310 242 aa12.17□□□□□ -0.46
USP43-202ENST00000570475 TMEM75Q8N9X5 138 aa12.17□□□□□ -0.46
USP43-202ENST00000570475 PRELID3AQ96N28 172 aa12.17□□□□□ -0.46
USP43-202ENST00000570475 HIF1ANQ9NWT6 349 aa12.17□□□□□ -0.46
USP43-202ENST00000570475 THYN1Q9P016 225 aa12.17□□□□□ -0.46
USP43-202ENST00000570475 FAM106CPP0CH98 169 aa12.16□□□□□ -0.46
USP43-202ENST00000570475 FAM106AQ4KMX7 169 aa12.16□□□□□ -0.46
USP43-202ENST00000570475 UFC1Q9Y3C8 167 aa12.16□□□□□ -0.46
USP43-202ENST00000570475 DSCAML1Q8TD84 2053 aa12.16□□□□□ -0.46
USP43-202ENST00000570475 EVI2AP22794 236 aa12.16□□□□□ -0.46
USP43-202ENST00000570475 HLA-DMBP28068 263 aa12.16□□□□□ -0.46
USP43-202ENST00000570475 GAGE1Q13065 139 aa12.16□□□□□ -0.46
USP43-202ENST00000570475 TIMD4Q96H15 378 aa12.16□□□□□ -0.46
USP43-202ENST00000570475 LTAP01374 205 aa12.15□□□□□ -0.46
USP43-202ENST00000570475 RPL11P62913 178 aaKnown RBP12.15□□□□□ -0.46
USP43-202ENST00000570475 MRPS16Q9Y3D3 137 aaKnown RBP12.15□□□□□ -0.46
USP43-202ENST00000570475 RELNP78509 3460 aa12.15□□□□□ -0.46
USP43-202ENST00000570475 IGKV1-17P01599 117 aa12.15□□□□□ -0.46
USP43-202ENST00000570475 PRSS57Q6UWY2 283 aa12.15□□□□□ -0.46
USP43-202ENST00000570475 C12orf54Q6X4T0 127 aa12.15□□□□□ -0.46
USP43-202ENST00000570475 ZNF292O60281 2723 aa12.15□□□□□ -0.46
USP43-202ENST00000570475 WIPF2Q8TF74 440 aaPredicted RBP12.15□□□□□ -0.47
USP43-202ENST00000570475 URB1-AS1Q96HZ7 61 aa12.15□□□□□ -0.47
USP43-202ENST00000570475 FAM120AOSQ5T036 256 aa12.14□□□□□ -0.47
USP43-202ENST00000570475 DEFB104AQ8WTQ1 72 aa12.14□□□□□ -0.47
USP43-202ENST00000570475 CCL21O00585 134 aa12.14□□□□□ -0.47
USP43-202ENST00000570475 SFTPCP11686 197 aa12.14□□□□□ -0.47
USP43-202ENST00000570475 GPR183P32249 361 aa12.14□□□□□ -0.47
USP43-202ENST00000570475 CHCHD1Q96BP2 118 aaKnown RBP12.14□□□□□ -0.47
USP43-202ENST00000570475 IGHV3OR16-10A0A075B7F0 116 aa12.14□□□□□ -0.47
USP43-202ENST00000570475 LOXL1Q08397 574 aaPredicted RBP12.14□□□□□ -0.47
USP43-202ENST00000570475 ORAOV1Q8WV07 137 aa12.14□□□□□ -0.47
USP43-202ENST00000570475 DPM3Q9P2X0 92 aa12.14□□□□□ -0.47
USP43-202ENST00000570475 ZNF672Q499Z4 452 aaPredicted RBP12.13□□□□□ -0.47
USP43-202ENST00000570475 ST20Q9HBF5 79 aa12.13□□□□□ -0.47
USP43-202ENST00000570475 MFAP4P55083 255 aa12.13□□□□□ -0.47
USP43-202ENST00000570475 KLF5Q13887 457 aaPredicted RBP12.13□□□□□ -0.47
USP43-202ENST00000570475 ZZEF1O43149 2961 aa12.13□□□□□ -0.47
USP43-202ENST00000570475 SORL1Q92673 2214 aa12.13□□□□□ -0.47
USP43-202ENST00000570475 TRBV19A0A075B6N1 114 aa12.12□□□□□ -0.47
USP43-202ENST00000570475 NBR2O15453 112 aa12.12□□□□□ -0.47
USP43-202ENST00000570475 LINC00527Q9UJ94 153 aa12.12□□□□□ -0.47
USP43-202ENST00000570475 B9A039 149 aa12.12□□□□□ -0.47
USP43-202ENST00000570475 A0A1B0GXF2 115 aa12.12□□□□□ -0.47
USP43-202ENST00000570475 GAGE10A6NGK3 116 aa12.12□□□□□ -0.47
USP43-202ENST00000570475 KLK15Q9H2R5 256 aa12.12□□□□□ -0.47
USP43-202ENST00000570475 C21orf62Q9NYP8 219 aa12.12□□□□□ -0.47
USP43-202ENST00000570475 MRPL52Q86TS9 123 aaKnown RBP12.11□□□□□ -0.47
USP43-202ENST00000570475 MLST8Q9BVC4 326 aa12.11□□□□□ -0.47
USP43-202ENST00000570475 CACNA1AO00555 2505 aa12.11□□□□□ -0.47
USP43-202ENST00000570475 CSMD1Q96PZ7 3565 aa12.11□□□□□ -0.47
USP43-202ENST00000570475 C7orf71A4D174 169 aa12.11□□□□□ -0.47
USP43-202ENST00000570475 H3BUT2 72 aa12.11□□□□□ -0.47
USP43-202ENST00000570475 CEACAM3P40198 252 aa12.11□□□□□ -0.47
USP43-202ENST00000570475 PSG3Q16557 428 aa12.11□□□□□ -0.47
USP43-202ENST00000570475 NDFIP1Q9BT67 221 aa12.11□□□□□ -0.47
USP43-202ENST00000570475 LINC00574Q9H8X3 128 aa12.11□□□□□ -0.47
USP43-202ENST00000570475 SHISA9B4DS77 424 aa12.11□□□□□ -0.47
USP43-202ENST00000570475 TEX22C9J3V5 150 aa12.11□□□□□ -0.47
USP43-202ENST00000570475 GCSHP23434 173 aa12.11□□□□□ -0.47
USP43-202ENST00000570475 ERCC8Q13216 396 aa12.11□□□□□ -0.47
USP43-202ENST00000570475 IGFL3Q6UXB1 125 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms