RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 UNC13CQ8NB66 2214 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 CHD3Q12873 2000 aaKnown RBP-0.26□□□□□ -2.45
CDH1-211ENST00000567320 ANKRD31Q8N7Z5 1873 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 KDM5CP41229 1560 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 LPAP08519 4548 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 PTPRMP28827 1452 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 GOLGA3Q08378 1498 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 TCOF1Q13428 1488 aaKnown RBP-0.26□□□□□ -2.45
CDH1-211ENST00000567320 BLMP54132 1417 aaPredicted RBP-0.26□□□□□ -2.45
CDH1-211ENST00000567320 FMN1Q68DA7 1419 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 FGD6Q6ZV73 1430 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 A0A087WTM6 91 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 A0A0J9YY99 117 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 hDV103S1A0JD37 113 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 PRORSD1PA6NEY8 169 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 FAM159BA6NKW6 160 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 A8MWV9 139 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 C10orf142B7Z368 130 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 J3QRK9 145 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 CDC42EP2O14613 210 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 TAX1BP3O14907 124 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 SSNA1O43805 119 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 CST8O60676 142 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 PIAS1O75925 651 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 OR7C1O76099 320 aaPredicted RBP-0.26□□□□□ -2.45
CDH1-211ENST00000567320 DEXIO95424 95 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 IFNA5P01569 189 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 TFF1P04155 84 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 IFNA16P05015 189 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 CALB1P05937 261 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 RBP1P09455 135 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 OCMP0CE72 109 aaPredicted RBP-0.26□□□□□ -2.45
CDH1-211ENST00000567320 MPC1LP0DKB6 136 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 IFITM1P13164 125 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 EVI2AP22794 236 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 RPS3P23396 243 aaKnown RBP eCLIP-0.26□□□□□ -2.45
CDH1-211ENST00000567320 PHBP35232 272 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 ANP32AP39687 249 aaKnown RBP-0.26□□□□□ -2.45
CDH1-211ENST00000567320 ETV6P41212 452 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 SULT1A1P50225 295 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 ARPP19P56211 112 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 FXYD6P3P58550 94 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 PSME3P61289 254 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 LSM6P62312 80 aaKnown RBP-0.26□□□□□ -2.45
CDH1-211ENST00000567320 EIF5AP63241 154 aaKnown RBP-0.26□□□□□ -2.45
CDH1-211ENST00000567320 AESQ08117 197 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 KLRD1Q13241 179 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 MED21Q13503 144 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 KRR1Q13601 381 aaKnown RBP-0.26□□□□□ -2.45
CDH1-211ENST00000567320 NEDD8Q15843 81 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 BATFQ16520 125 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 RRN3P1Q2M238 152 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 Q6Q795 121 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 C2orf82Q6UX34 121 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 FAM151BQ6UXP7 276 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 DEFB132Q7Z7B7 95 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 S100A7AQ86SG5 101 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 LRRC18Q8N456 261 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 STX19Q8N4C7 294 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 OR5D16Q8NGK9 328 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 OR4K15Q8NH41 348 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 FAM213BQ8TBF2 198 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 ZNF431Q8TF32 576 aaPredicted RBP-0.26□□□□□ -2.45
CDH1-211ENST00000567320 FAM172AQ8WUF8 416 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 CHCHD1Q96BP2 118 aaKnown RBP-0.26□□□□□ -2.45
CDH1-211ENST00000567320 ZHX1-C8orf76Q96EF9 292 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 OR52E6Q96RD3 313 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 LINC00467Q9BRT7 94 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 NPCDR1Q9BY65 106 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 CCDC90BQ9GZT6 254 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 FGFR1OP2Q9NVK5 253 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 NHP2Q9NX24 153 aaKnown RBP-0.26□□□□□ -2.45
CDH1-211ENST00000567320 COMMD3Q9UBI1 195 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 NAT8BQ9UHF3 227 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 RNF11Q9Y3C5 154 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 ARL5AQ9Y689 179 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 LY96Q9Y6Y9 160 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 CACNA1CQ13936 2221 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 ZGRF1Q86YA3 2104 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 MYO18AQ92614 2054 aaKnown RBP-0.26□□□□□ -2.45
CDH1-211ENST00000567320 MYH10P35580 1976 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 TRPM7Q96QT4 1865 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 ADGBQ8N7X0 1667 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 NHSL1Q5SYE7 1610 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 IGSF10Q6WRI0 2623 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 POLQO75417 2590 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 ABCA12Q86UK0 2595 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 IGF2RP11717 2491 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 ARAP1Q96P48 1450 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 FAM135BQ49AJ0 1406 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 ZDBF2Q9HCK1 2354 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 PTPRZ1P23471 2315 aaPredicted RBP-0.27□□□□□ -2.45
CDH1-211ENST00000567320 ASCC3Q8N3C0 2202 aaKnown RBP-0.27□□□□□ -2.45
CDH1-211ENST00000567320 TRBV19A0A075B6N1 114 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 TRAV27A0A087WT01 109 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 GVQW2A0A096LPI5 108 aaPredicted RBP-0.27□□□□□ -2.45
CDH1-211ENST00000567320 TRGV10A0A0A0MS01 117 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 TRAV5A0A0B4J249 113 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 A0A1B0GV50 99 aa-0.27□□□□□ -2.45
CDH1-211ENST00000567320 A0A1B0GW64 132 aa-0.27□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms