RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 PLGLAQ15195 96 aa14.03□□□□□ -0.16
GDE1-203ENST00000564172 TNXAQ16473 311 aa14.03□□□□□ -0.16
GDE1-203ENST00000564172 Q8N6K4 173 aa14.03□□□□□ -0.16
GDE1-203ENST00000564172 F2Z2F3 143 aa14.03□□□□□ -0.16
GDE1-203ENST00000564172 CBLN1P23435 193 aa14.03□□□□□ -0.16
GDE1-203ENST00000564172 SLC39A9Q9NUM3 307 aa14.03□□□□□ -0.16
GDE1-203ENST00000564172 C7orf71A4D174 169 aa14.02□□□□□ -0.16
GDE1-203ENST00000564172 FAM106CPP0CH98 169 aa14.02□□□□□ -0.16
GDE1-203ENST00000564172 IGHV4-31P0DP07 118 aa14.02□□□□□ -0.16
GDE1-203ENST00000564172 FAM120AOSQ5T036 256 aa14.02□□□□□ -0.16
GDE1-203ENST00000564172 CACNG8Q8WXS5 425 aa14.02□□□□□ -0.16
GDE1-203ENST00000564172 FAM231BA6NCW3 169 aa14.02□□□□□ -0.17
GDE1-203ENST00000564172 C9orf118A6NHY6 69 aa14.02□□□□□ -0.17
GDE1-203ENST00000564172 PRSS46E5RG02 174 aa14.02□□□□□ -0.17
GDE1-203ENST00000564172 J3QR89 54 aa14.02□□□□□ -0.17
GDE1-203ENST00000564172 RPL27AP46776 148 aaKnown RBP14.02□□□□□ -0.17
GDE1-203ENST00000564172 ERHP84090 104 aaKnown RBP14.02□□□□□ -0.17
GDE1-203ENST00000564172 HIST1H1AQ02539 215 aaPredicted RBP14.02□□□□□ -0.17
GDE1-203ENST00000564172 WT1-ASQ06250 92 aa14.02□□□□□ -0.17
GDE1-203ENST00000564172 KLF17Q5JT82 389 aaPredicted RBP14.02□□□□□ -0.17
GDE1-203ENST00000564172 SLC25A34Q6PIV7 304 aa14.02□□□□□ -0.17
GDE1-203ENST00000564172 OR4F5Q8NH21 305 aa14.02□□□□□ -0.17
GDE1-203ENST00000564172 TNFRSF18Q9Y5U5 241 aa14.02□□□□□ -0.17
GDE1-203ENST00000564172 UNC79Q9P2D8 2635 aa14.01□□□□□ -0.17
GDE1-203ENST00000564172 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.01□□□□□ -0.17
GDE1-203ENST00000564172 PDE6DO43924 150 aa14.01□□□□□ -0.17
GDE1-203ENST00000564172 GNB1P62873 340 aa14.01□□□□□ -0.17
GDE1-203ENST00000564172 AP1S3Q96PC3 154 aa14.01□□□□□ -0.17
GDE1-203ENST00000564172 SPXQ9BT56 116 aa14.01□□□□□ -0.17
GDE1-203ENST00000564172 TMEM147Q9BVK8 224 aa14.01□□□□□ -0.17
GDE1-203ENST00000564172 THYN1Q9P016 225 aa14.01□□□□□ -0.17
GDE1-203ENST00000564172 CREBBPQ92793 2442 aa14.01□□□□□ -0.17
GDE1-203ENST00000564172 TRBV7-9A0A0J9YWB2 115 aa14□□□□□ -0.17
GDE1-203ENST00000564172 H3BRM9 83 aa14□□□□□ -0.17
GDE1-203ENST00000564172 J3QLI3 93 aa14□□□□□ -0.17
GDE1-203ENST00000564172 LRRC75BQ2VPJ9 315 aa14□□□□□ -0.17
GDE1-203ENST00000564172 FOXI2Q6ZQN5 318 aa14□□□□□ -0.17
GDE1-203ENST00000564172 WFDC11Q8NEX6 87 aa14□□□□□ -0.17
GDE1-203ENST00000564172 VSIRQ9H7M9 311 aa14□□□□□ -0.17
GDE1-203ENST00000564172 C1RLQ9NZP8 487 aa14□□□□□ -0.17
GDE1-203ENST00000564172 NCBP2LA6PVI3 153 aaKnown RBP14□□□□□ -0.17
GDE1-203ENST00000564172 RNASE2P10153 161 aaKnown RBP14□□□□□ -0.17
GDE1-203ENST00000564172 PMCHP20382 165 aa14□□□□□ -0.17
GDE1-203ENST00000564172 ATP5IP56385 69 aaPredicted RBP14□□□□□ -0.17
GDE1-203ENST00000564172 HERV-K104P63124 156 aa14□□□□□ -0.17
GDE1-203ENST00000564172 VWC2Q2TAL6 325 aa14□□□□□ -0.17
GDE1-203ENST00000564172 C2orf83Q53S99 150 aa14□□□□□ -0.17
GDE1-203ENST00000564172 CR1P17927 2039 aa14□□□□□ -0.17
GDE1-203ENST00000564172 CCDC168Q8NDH2 2452 aa14□□□□□ -0.17
GDE1-203ENST00000564172 UBE2L5PA0A1B0GUS4 154 aa13.99□□□□□ -0.17
GDE1-203ENST00000564172 MDFIC2A0A1B0GVS7 189 aa13.99□□□□□ -0.17
GDE1-203ENST00000564172 ZNF207O43670 478 aaKnown RBP13.99□□□□□ -0.17
GDE1-203ENST00000564172 ATOH7Q8N100 152 aa13.99□□□□□ -0.17
GDE1-203ENST00000564172 MRPL16Q9NX20 251 aaKnown RBP13.99□□□□□ -0.17
GDE1-203ENST00000564172 IL36BQ9NZH7 164 aa13.99□□□□□ -0.17
GDE1-203ENST00000564172 OR2K2Q8NGT1 345 aa13.99□□□□□ -0.17
GDE1-203ENST00000564172 SRSF12Q8WXF0 261 aaKnown RBP13.99□□□□□ -0.17
GDE1-203ENST00000564172 SOX21Q9Y651 276 aaPredicted RBP13.99□□□□□ -0.17
GDE1-203ENST00000564172 CSPG4Q6UVK1 2322 aa13.99□□□□□ -0.17
GDE1-203ENST00000564172 CELSR1Q9NYQ6 3014 aa13.99□□□□□ -0.17
GDE1-203ENST00000564172 CRYBB3P26998 211 aa13.98□□□□□ -0.17
GDE1-203ENST00000564172 TAF15Q92804 592 aaKnown RBP eCLIP13.98□□□□□ -0.17
GDE1-203ENST00000564172 TIMM9Q9Y5J7 89 aa13.98□□□□□ -0.17
GDE1-203ENST00000564172 ABCA1O95477 2261 aa13.98□□□□□ -0.17
GDE1-203ENST00000564172 ZNF90Q03938 601 aa13.98□□□□□ -0.17
GDE1-203ENST00000564172 TSKUQ8WUA8 353 aa13.98□□□□□ -0.17
GDE1-203ENST00000564172 ITPR2Q14571 2701 aa13.97□□□□□ -0.17
GDE1-203ENST00000564172 PDZD2O15018 2839 aa13.97□□□□□ -0.17
GDE1-203ENST00000564172 TEX22C9J3V5 150 aa13.97□□□□□ -0.17
GDE1-203ENST00000564172 CNIH1O95406 144 aa13.97□□□□□ -0.17
GDE1-203ENST00000564172 NAV3Q8IVL0 2385 aa13.97□□□□□ -0.17
GDE1-203ENST00000564172 APELAP0DMC3 54 aa13.96□□□□□ -0.17
GDE1-203ENST00000564172 FA2HQ7L5A8 372 aa13.96□□□□□ -0.17
GDE1-203ENST00000564172 Q8N9W7 124 aa13.96□□□□□ -0.17
GDE1-203ENST00000564172 OR10G8Q8NGN5 311 aa13.96□□□□□ -0.17
GDE1-203ENST00000564172 PIFOQ8TCI5 191 aa13.96□□□□□ -0.17
GDE1-203ENST00000564172 FOXC2Q99958 501 aa13.96□□□□□ -0.17
GDE1-203ENST00000564172 FNDC4Q9H6D8 234 aaPredicted RBP13.96□□□□□ -0.17
GDE1-203ENST00000564172 HECTD1Q9ULT8 2610 aa13.96□□□□□ -0.17
GDE1-203ENST00000564172 ZANQ9Y493 2812 aa13.96□□□□□ -0.17
GDE1-203ENST00000564172 CTXND1A0A1B0GTU2 59 aa13.96□□□□□ -0.17
GDE1-203ENST00000564172 SNURFLB1AK76 121 aa13.96□□□□□ -0.17
GDE1-203ENST00000564172 AREGP15514 252 aa13.96□□□□□ -0.17
GDE1-203ENST00000564172 ZNF562Q6V9R5 426 aa13.96□□□□□ -0.17
GDE1-203ENST00000564172 PMCHL2Q9BQD1 86 aa13.96□□□□□ -0.17
GDE1-203ENST00000564172 PSG8Q9UQ74 426 aa13.96□□□□□ -0.17
GDE1-203ENST00000564172 TSSC4Q9Y5U2 329 aaPredicted RBP13.96□□□□□ -0.17
GDE1-203ENST00000564172 SUB1P53999 127 aaKnown RBP eCLIP13.95□□□□□ -0.18
GDE1-203ENST00000564172 FXYD3Q14802 87 aa13.95□□□□□ -0.18
GDE1-203ENST00000564172 LCN12Q6JVE5 192 aa13.95□□□□□ -0.18
GDE1-203ENST00000564172 CIARTQ8N365 385 aaPredicted RBP13.95□□□□□ -0.18
GDE1-203ENST00000564172 C18orf32Q8TCD1 76 aa13.95□□□□□ -0.18
GDE1-203ENST00000564172 GATA2P23769 480 aaPredicted RBP13.95□□□□□ -0.18
GDE1-203ENST00000564172 UBE2G1P62253 170 aa13.95□□□□□ -0.18
GDE1-203ENST00000564172 CX3CL1P78423 397 aa13.95□□□□□ -0.18
GDE1-203ENST00000564172 TREML4Q6UXN2 200 aa13.95□□□□□ -0.18
GDE1-203ENST00000564172 SSMEM1Q8WWF3 244 aa13.95□□□□□ -0.18
GDE1-203ENST00000564172 WDR83OSQ9Y284 106 aa13.95□□□□□ -0.18
GDE1-203ENST00000564172 A6NDN8 102 aa13.94□□□□□ -0.18
GDE1-203ENST00000564172 BLNKQ8WV28 456 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms