RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 IGHG2P01859 326 aa5.1□□□□□ -1.59
CLK3-212ENST00000563418 M0R381 172 aa5.1□□□□□ -1.59
CLK3-212ENST00000563418 NCR2O95944 276 aa5.1□□□□□ -1.59
CLK3-212ENST00000563418 SSC4DQ8WTU2 575 aa5.1□□□□□ -1.59
CLK3-212ENST00000563418 DPH3P1Q9H4G8 78 aa5.1□□□□□ -1.59
CLK3-212ENST00000563418 MRPL35Q9NZE8 188 aaKnown RBP5.1□□□□□ -1.59
CLK3-212ENST00000563418 DENND4CQ5VZ89 1909 aa5.1□□□□□ -1.59
CLK3-212ENST00000563418 VCYO14598 125 aa5.1□□□□□ -1.59
CLK3-212ENST00000563418 Q6ZRM9 215 aa5.1□□□□□ -1.59
CLK3-212ENST00000563418 BRK1Q8WUW1 75 aa5.1□□□□□ -1.59
CLK3-212ENST00000563418 HS3ST6Q96QI5 342 aa5.1□□□□□ -1.59
CLK3-212ENST00000563418 NCKAP5O14513 1909 aa5.09□□□□□ -1.59
CLK3-212ENST00000563418 C17orf99Q6UX52 265 aa5.09□□□□□ -1.59
CLK3-212ENST00000563418 GATD1Q8NB37 220 aa5.09□□□□□ -1.59
CLK3-212ENST00000563418 IGLV3-32A0A0A0MS00 114 aa5.09□□□□□ -1.59
CLK3-212ENST00000563418 C21orf140B9A014 251 aa5.09□□□□□ -1.59
CLK3-212ENST00000563418 CR1LQ2VPA4 569 aa5.09□□□□□ -1.59
CLK3-212ENST00000563418 RNF125Q96EQ8 232 aa5.09□□□□□ -1.59
CLK3-212ENST00000563418 PRDM6Q9NQX0 595 aa5.09□□□□□ -1.59
CLK3-212ENST00000563418 ZNF493Q6ZR52 646 aa5.09□□□□□ -1.59
CLK3-212ENST00000563418 IGFBPL1Q8WX77 278 aa5.09□□□□□ -1.59
CLK3-212ENST00000563418 TMEM74BQ9NUR3 256 aa5.09□□□□□ -1.59
CLK3-212ENST00000563418 TMEM131Q92545 1883 aa5.09□□□□□ -1.59
CLK3-212ENST00000563418 FAM240AA0A1B0GVK7 77 aa5.09□□□□□ -1.59
CLK3-212ENST00000563418 H3BTX0 84 aa5.09□□□□□ -1.59
CLK3-212ENST00000563418 RNASE1P07998 156 aaKnown RBP5.09□□□□□ -1.59
CLK3-212ENST00000563418 LINC01620Q4KN68 170 aa5.09□□□□□ -1.59
CLK3-212ENST00000563418 TMEM14CQ9P0S9 112 aa5.09□□□□□ -1.59
CLK3-212ENST00000563418 A0A0G2JRQ6 117 aa5.09□□□□□ -1.6
CLK3-212ENST00000563418 ZNHIT1O43257 154 aa5.09□□□□□ -1.6
CLK3-212ENST00000563418 SH2D1AO60880 128 aa5.09□□□□□ -1.6
CLK3-212ENST00000563418 DEFB119Q8N690 84 aa5.09□□□□□ -1.6
CLK3-212ENST00000563418 VPREB3Q9UKI3 123 aa5.09□□□□□ -1.6
CLK3-212ENST00000563418 MRPS36P82909 103 aaKnown RBP5.09□□□□□ -1.6
CLK3-212ENST00000563418 SAA1P0DJI8 122 aaPredicted RBP5.08□□□□□ -1.6
CLK3-212ENST00000563418 COX6A1P12074 109 aa5.08□□□□□ -1.6
CLK3-212ENST00000563418 ODF1Q14990 250 aa5.08□□□□□ -1.6
CLK3-212ENST00000563418 C1orf195Q5TG92 126 aa5.08□□□□□ -1.6
CLK3-212ENST00000563418 IGHV3OR15-7A0A075B7D8 119 aa5.08□□□□□ -1.6
CLK3-212ENST00000563418 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.08□□□□□ -1.6
CLK3-212ENST00000563418 SAA2P0DJI9 122 aaPredicted RBP5.08□□□□□ -1.6
CLK3-212ENST00000563418 CFHR2P36980 270 aa5.08□□□□□ -1.6
CLK3-212ENST00000563418 MRPL51Q4U2R6 128 aaKnown RBP5.08□□□□□ -1.6
CLK3-212ENST00000563418 SHISA2Q6UWI4 295 aa5.08□□□□□ -1.6
CLK3-212ENST00000563418 DKK2Q9UBU2 259 aa5.08□□□□□ -1.6
CLK3-212ENST00000563418 COL11A2P13942 1736 aaPredicted RBP5.08□□□□□ -1.6
CLK3-212ENST00000563418 IGKV1-27A0A075B6S5 117 aa5.08□□□□□ -1.6
CLK3-212ENST00000563418 ATP5EP2Q5VTU8 51 aa5.08□□□□□ -1.6
CLK3-212ENST00000563418 C8orf31Q8N9H6 132 aa5.08□□□□□ -1.6
CLK3-212ENST00000563418 IGF2BP2-AS1Q96M15 143 aa5.08□□□□□ -1.6
CLK3-212ENST00000563418 IGKV1-12A0A0C4DH73 117 aa5.08□□□□□ -1.6
CLK3-212ENST00000563418 IGKV1D-12P01611 117 aa5.08□□□□□ -1.6
CLK3-212ENST00000563418 CCL8P80075 99 aa5.08□□□□□ -1.6
CLK3-212ENST00000563418 NRTNQ99748 197 aa5.08□□□□□ -1.6
CLK3-212ENST00000563418 CHCHD5Q9BSY4 110 aa5.08□□□□□ -1.6
CLK3-212ENST00000563418 TMEM86BQ8N661 226 aa5.08□□□□□ -1.6
CLK3-212ENST00000563418 PRR7Q8TB68 274 aa5.08□□□□□ -1.6
CLK3-212ENST00000563418 C11orf1Q9H5F2 150 aa5.08□□□□□ -1.6
CLK3-212ENST00000563418 LINC01619G3V211 115 aa5.08□□□□□ -1.6
CLK3-212ENST00000563418 A0A1W2PR77 199 aa5.07□□□□□ -1.6
CLK3-212ENST00000563418 NDUFC2-KCTD14E9PQ53 114 aa5.07□□□□□ -1.6
CLK3-212ENST00000563418 CCDC179H3BU77 68 aa5.07□□□□□ -1.6
CLK3-212ENST00000563418 NXPH1P58417 271 aa5.07□□□□□ -1.6
CLK3-212ENST00000563418 PHLDA1Q8WV24 401 aaPredicted RBP5.07□□□□□ -1.6
CLK3-212ENST00000563418 VWA8A3KMH1 1905 aa5.07□□□□□ -1.6
CLK3-212ENST00000563418 COL4A1P02462 1669 aa5.07□□□□□ -1.6
CLK3-212ENST00000563418 INTS1Q8N201 2190 aaKnown RBP5.07□□□□□ -1.6
CLK3-212ENST00000563418 FAM236DA0A1B0GTK5 79 aa5.07□□□□□ -1.6
CLK3-212ENST00000563418 FAM236CP0DP71 79 aa5.07□□□□□ -1.6
CLK3-212ENST00000563418 CD28P10747 220 aa5.07□□□□□ -1.6
CLK3-212ENST00000563418 IGHV3-21A0A0B4J1V1 117 aa5.07□□□□□ -1.6
CLK3-212ENST00000563418 BADQ92934 168 aa5.07□□□□□ -1.6
CLK3-212ENST00000563418 TMEM14BQ9NUH8 114 aa5.07□□□□□ -1.6
CLK3-212ENST00000563418 NDUFC1O43677 76 aa5.07□□□□□ -1.6
CLK3-212ENST00000563418 CFAP126Q5VTH2 177 aa5.07□□□□□ -1.6
CLK3-212ENST00000563418 MRPL14Q6P1L8 145 aaKnown RBP5.07□□□□□ -1.6
CLK3-212ENST00000563418 HES7Q9BYE0 225 aa5.07□□□□□ -1.6
CLK3-212ENST00000563418 CD7P09564 240 aa5.07□□□□□ -1.6
CLK3-212ENST00000563418 C2orf66Q6UXQ4 117 aa5.07□□□□□ -1.6
CLK3-212ENST00000563418 K7EQS6 105 aa5.06□□□□□ -1.6
CLK3-212ENST00000563418 GUSBP11Q6P575 273 aa5.06□□□□□ -1.6
CLK3-212ENST00000563418 ZCCHC24Q8N2G6 241 aaKnown RBP5.06□□□□□ -1.6
CLK3-212ENST00000563418 LY6G5BQ8NDX9 201 aa5.06□□□□□ -1.6
CLK3-212ENST00000563418 NEU4Q8WWR8 484 aaPredicted RBP5.06□□□□□ -1.6
CLK3-212ENST00000563418 J3QQQ9 107 aa5.06□□□□□ -1.6
CLK3-212ENST00000563418 SRSF2Q01130 221 aaKnown RBP5.06□□□□□ -1.6
CLK3-212ENST00000563418 LY6DQ14210 128 aa5.06□□□□□ -1.6
CLK3-212ENST00000563418 IGHV1OR21-1A0A087WYE8 117 aa5.06□□□□□ -1.6
CLK3-212ENST00000563418 XGP55808 180 aa5.06□□□□□ -1.6
CLK3-212ENST00000563418 PSG7Q13046 419 aa5.06□□□□□ -1.6
CLK3-212ENST00000563418 PRO0628Q9UI54 55 aa5.06□□□□□ -1.6
CLK3-212ENST00000563418 ATP5J2P56134 94 aa5.06□□□□□ -1.6
CLK3-212ENST00000563418 C1orf162Q8NEQ5 155 aaPredicted RBP5.06□□□□□ -1.6
CLK3-212ENST00000563418 IGKV3D-11A0A0A0MRZ8 115 aa5.06□□□□□ -1.6
CLK3-212ENST00000563418 TRAV13-2A0A0B4J235 113 aa5.06□□□□□ -1.6
CLK3-212ENST00000563418 COX7CP15954 63 aa5.06□□□□□ -1.6
CLK3-212ENST00000563418 NDUFA11Q86Y39 141 aa5.06□□□□□ -1.6
CLK3-212ENST00000563418 ICOSQ9Y6W8 199 aa5.06□□□□□ -1.6
CLK3-212ENST00000563418 TNS1Q9HBL0 1735 aaKnown RBP5.06□□□□□ -1.6
CLK3-212ENST00000563418 BRWD3Q6RI45 1802 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms