RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, humanhuman

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-208ENST00000563092 H3BRN7 92 aa5.62□□□□□ -1.51
CKLF-208ENST00000563092 GABARAPH6UMI1 98 aa5.62□□□□□ -1.51
CKLF-208ENST00000563092 K7EP13 123 aa5.62□□□□□ -1.51
CKLF-208ENST00000563092 GAGE7O76087 117 aa5.62□□□□□ -1.51
CKLF-208ENST00000563092 NXPH4O95158 308 aa5.62□□□□□ -1.51
CKLF-208ENST00000563092 GABARAPO95166 117 aa5.62□□□□□ -1.51
CKLF-208ENST00000563092 GAGE12FP0CL80 117 aa5.62□□□□□ -1.51
CKLF-208ENST00000563092 GAGE12GP0CL81 117 aa5.62□□□□□ -1.51
CKLF-208ENST00000563092 GAGE12IP0CL82 117 aa5.62□□□□□ -1.51
CKLF-208ENST00000563092 ZNF182P17025 639 aaPredicted RBP5.62□□□□□ -1.51
CKLF-208ENST00000563092 CCR6P51684 374 aa5.62□□□□□ -1.51
CKLF-208ENST00000563092 HAMPP81172 84 aa5.62□□□□□ -1.51
CKLF-208ENST00000563092 HIST1H1AQ02539 215 aaPredicted RBP5.62□□□□□ -1.51
CKLF-208ENST00000563092 SMCO1Q147U7 214 aa5.62□□□□□ -1.51
CKLF-208ENST00000563092 KIR3DS1Q14943 382 aa5.62□□□□□ -1.51
CKLF-208ENST00000563092 C4orf46Q504U0 113 aa5.62□□□□□ -1.51
CKLF-208ENST00000563092 TMEM229BQ8NBD8 167 aa5.62□□□□□ -1.51
CKLF-208ENST00000563092 ZNF738Q8NE65 137 aa5.62□□□□□ -1.51
CKLF-208ENST00000563092 OR52I2Q8NH67 350 aa5.62□□□□□ -1.51
CKLF-208ENST00000563092 YIPF6Q96EC8 236 aa5.62□□□□□ -1.51
CKLF-208ENST00000563092 TMPRSS5Q9H3S3 457 aa5.62□□□□□ -1.51
CKLF-208ENST00000563092 COMMD3Q9UBI1 195 aa5.62□□□□□ -1.51
CKLF-208ENST00000563092 GPR132Q9UNW8 380 aa5.62□□□□□ -1.51
CKLF-208ENST00000563092 DNAH8Q96JB1 4490 aa5.62□□□□□ -1.51
CKLF-208ENST00000563092 HPGDSO60760 199 aa5.61□□□□□ -1.51
CKLF-208ENST00000563092 PITX3O75364 302 aa5.61□□□□□ -1.51
CKLF-208ENST00000563092 C1QBP02746 253 aa5.61□□□□□ -1.51
CKLF-208ENST00000563092 RLN2P04090 185 aa5.61□□□□□ -1.51
CKLF-208ENST00000563092 HTN1P15515 57 aa5.61□□□□□ -1.51
CKLF-208ENST00000563092 PSG3Q16557 428 aa5.61□□□□□ -1.51
CKLF-208ENST00000563092 Q6ZTI0 123 aa5.61□□□□□ -1.51
CKLF-208ENST00000563092 TMED4Q7Z7H5 227 aa5.61□□□□□ -1.51
CKLF-208ENST00000563092 SHANK2-AS3Q9BTD1 123 aa5.61□□□□□ -1.51
CKLF-208ENST00000563092 FAM30AQ9NZY2 134 aa5.61□□□□□ -1.51
CKLF-208ENST00000563092 A0A0B4J2A0 478 aa5.6□□□□□ -1.51
CKLF-208ENST00000563092 LRCOL1A6NCL2 159 aa5.6□□□□□ -1.51
CKLF-208ENST00000563092 MRPS12O15235 138 aaKnown RBP5.6□□□□□ -1.51
CKLF-208ENST00000563092 TNFAIP8O95379 198 aa5.6□□□□□ -1.51
CKLF-208ENST00000563092 RAB3DO95716 219 aa5.6□□□□□ -1.51
CKLF-208ENST00000563092 RPL7P18124 248 aaKnown RBP5.6□□□□□ -1.51
CKLF-208ENST00000563092 GATA2P23769 480 aaPredicted RBP5.6□□□□□ -1.51
CKLF-208ENST00000563092 TAS2R19P59542 299 aa5.6□□□□□ -1.51
CKLF-208ENST00000563092 PLP1P60201 277 aa5.6□□□□□ -1.51
CKLF-208ENST00000563092 RHOBP62745 196 aa5.6□□□□□ -1.51
CKLF-208ENST00000563092 NEDD8Q15843 81 aa5.6□□□□□ -1.51
CKLF-208ENST00000563092 SCGB2B2Q4G0G5 96 aa5.6□□□□□ -1.51
CKLF-208ENST00000563092 GFI1BQ5VTD9 330 aa5.6□□□□□ -1.51
CKLF-208ENST00000563092 STEAP1BQ6NZ63 245 aa5.6□□□□□ -1.51
CKLF-208ENST00000563092 Q6ZSA8 131 aa5.6□□□□□ -1.51
CKLF-208ENST00000563092 ACOT7LQ6ZUV0 252 aa5.6□□□□□ -1.51
CKLF-208ENST00000563092 DEFB104AQ8WTQ1 72 aa5.6□□□□□ -1.51
CKLF-208ENST00000563092 NTN5Q8WTR8 489 aaPredicted RBP5.6□□□□□ -1.51
CKLF-208ENST00000563092 LINC00467Q9BRT7 94 aa5.6□□□□□ -1.51
CKLF-208ENST00000563092 SHPKQ9UHJ6 478 aa5.6□□□□□ -1.51
CKLF-208ENST00000563092 C14orf166Q9Y224 244 aaKnown RBP5.6□□□□□ -1.51
CKLF-208ENST00000563092 H3BS24 57 aa5.59□□□□□ -1.51
CKLF-208ENST00000563092 ZNF324O75467 553 aaPredicted RBP5.59□□□□□ -1.51
CKLF-208ENST00000563092 ORM2P19652 201 aa5.59□□□□□ -1.51
CKLF-208ENST00000563092 S100A7P31151 101 aa5.59□□□□□ -1.51
CKLF-208ENST00000563092 KRTAP10-4P60372 401 aaPredicted RBP5.59□□□□□ -1.51
CKLF-208ENST00000563092 SSBP1Q04837 148 aaKnown RBP5.59□□□□□ -1.51
CKLF-208ENST00000563092 LYPD5Q6UWN5 251 aa5.59□□□□□ -1.51
CKLF-208ENST00000563092 LYZL2Q7Z4W2 148 aa5.59□□□□□ -1.51
CKLF-208ENST00000563092 CCDC28AQ8IWP9 274 aa5.59□□□□□ -1.51
CKLF-208ENST00000563092 ZBTB8BQ8NAP8 495 aaPredicted RBP5.59□□□□□ -1.51
CKLF-208ENST00000563092 C11orf72Q8NBR9 251 aa5.59□□□□□ -1.51
CKLF-208ENST00000563092 SYT8Q8NBV8 401 aa5.59□□□□□ -1.51
CKLF-208ENST00000563092 BPIFCQ8NFQ6 507 aa5.59□□□□□ -1.51
CKLF-208ENST00000563092 OR1S1Q8NH92 325 aa5.59□□□□□ -1.51
CKLF-208ENST00000563092 RPUSD4Q96CM3 377 aaKnown RBP5.59□□□□□ -1.51
CKLF-208ENST00000563092 TMEM147Q9BVK8 224 aa5.59□□□□□ -1.51
CKLF-208ENST00000563092 ZNF331Q9NQX6 463 aaPredicted RBP5.59□□□□□ -1.51
CKLF-208ENST00000563092 PRR13Q9NZ81 148 aa5.59□□□□□ -1.51
CKLF-208ENST00000563092 MSRB1Q9NZV6 116 aa5.59□□□□□ -1.51
CKLF-208ENST00000563092 TRAV9-2A0A087WT02 112 aa5.58□□□□□ -1.52
CKLF-208ENST00000563092 SNURFLB1AK76 121 aa5.58□□□□□ -1.52
CKLF-208ENST00000563092 PLA2G1BP04054 148 aaKnown RBP5.58□□□□□ -1.52
CKLF-208ENST00000563092 CXCL2P19875 107 aa5.58□□□□□ -1.52
CKLF-208ENST00000563092 LSM3P62310 102 aaKnown RBP5.58□□□□□ -1.52
CKLF-208ENST00000563092 RAB11AP62491 216 aa5.58□□□□□ -1.52
CKLF-208ENST00000563092 FAAP20Q6NZ36 180 aa5.58□□□□□ -1.52
CKLF-208ENST00000563092 ODF3Q96PU9 254 aa5.58□□□□□ -1.52
CKLF-208ENST00000563092 PYGO2Q9BRQ0 406 aa5.58□□□□□ -1.52
CKLF-208ENST00000563092 PPP1R14DQ9NXH3 145 aa5.58□□□□□ -1.52
CKLF-208ENST00000563092 ICOSQ9Y6W8 199 aa5.58□□□□□ -1.52
CKLF-208ENST00000563092 FAT3Q8TDW7 4589 aa5.58□□□□□ -1.52
CKLF-208ENST00000563092 IGLV5-52A0A0A0MRZ9 124 aa5.57□□□□□ -1.52
CKLF-208ENST00000563092 K7EPK0 472 aa5.57□□□□□ -1.52
CKLF-208ENST00000563092 SPINK4O60575 86 aa5.57□□□□□ -1.52
CKLF-208ENST00000563092 OXTP01178 125 aa5.57□□□□□ -1.52
CKLF-208ENST00000563092 SLC25A6P12236 298 aa5.57□□□□□ -1.52
CKLF-208ENST00000563092 AKR1C4P17516 323 aa5.57□□□□□ -1.52
CKLF-208ENST00000563092 LINC00310P59036 64 aa5.57□□□□□ -1.52
CKLF-208ENST00000563092 FGL1Q08830 312 aa5.57□□□□□ -1.52
CKLF-208ENST00000563092 C15orf40Q8WUR7 153 aa5.57□□□□□ -1.52
CKLF-208ENST00000563092 ST6GAL2Q96JF0 529 aa5.57□□□□□ -1.52
CKLF-208ENST00000563092 PARD6GQ9BYG4 376 aaPredicted RBP5.57□□□□□ -1.52
CKLF-208ENST00000563092 PLA2G2DQ9UNK4 145 aa5.57□□□□□ -1.52
CKLF-208ENST00000563092 HIGD1AQ9Y241 93 aa5.57□□□□□ -1.52
CKLF-208ENST00000563092 KCNIP3Q9Y2W7 256 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms