RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 TUBA4BQ9H853 241 aa5.06□□□□□ -1.6
CAPN3-210ENST00000561817 TMEM14CQ9P0S9 112 aa5.06□□□□□ -1.6
CAPN3-210ENST00000561817 PITPNC1Q9UKF7 332 aa5.06□□□□□ -1.6
CAPN3-210ENST00000561817 PUS1Q9Y606 427 aaKnown RBP eCLIP5.06□□□□□ -1.6
CAPN3-210ENST00000561817 ZNF727A8MUV8 499 aa5.05□□□□□ -1.6
CAPN3-210ENST00000561817 H3BUA1 57 aa5.05□□□□□ -1.6
CAPN3-210ENST00000561817 CD5LO43866 347 aa5.05□□□□□ -1.6
CAPN3-210ENST00000561817 OR7C2O60412 319 aa5.05□□□□□ -1.6
CAPN3-210ENST00000561817 NDUFB4O95168 129 aa5.05□□□□□ -1.6
CAPN3-210ENST00000561817 IGHV3-23P01764 117 aa5.05□□□□□ -1.6
CAPN3-210ENST00000561817 OR10J4P0C629 311 aa5.05□□□□□ -1.6
CAPN3-210ENST00000561817 SRP14P37108 136 aaKnown RBP5.05□□□□□ -1.6
CAPN3-210ENST00000561817 CEBPGP53567 150 aa5.05□□□□□ -1.6
CAPN3-210ENST00000561817 LINC00310P59036 64 aa5.05□□□□□ -1.6
CAPN3-210ENST00000561817 LYZP61626 148 aa5.05□□□□□ -1.6
CAPN3-210ENST00000561817 RPL23P62829 140 aaKnown RBP5.05□□□□□ -1.6
CAPN3-210ENST00000561817 PNRC1Q12796 327 aaPredicted RBP5.05□□□□□ -1.6
CAPN3-210ENST00000561817 C15orf32Q32M92 178 aa5.05□□□□□ -1.6
CAPN3-210ENST00000561817 LBHQ53QV2 105 aaPredicted RBP5.05□□□□□ -1.6
CAPN3-210ENST00000561817 C2CD4CQ8TF44 421 aa5.05□□□□□ -1.6
CAPN3-210ENST00000561817 RPUSD4Q96CM3 377 aaKnown RBP5.05□□□□□ -1.6
CAPN3-210ENST00000561817 C17orf77Q96MU5 243 aa5.05□□□□□ -1.6
CAPN3-210ENST00000561817 SMIM7Q9BQ49 75 aa5.05□□□□□ -1.6
CAPN3-210ENST00000561817 FAM110AQ9BQ89 295 aa5.05□□□□□ -1.6
CAPN3-210ENST00000561817 NIPSNAP3BQ9BS92 247 aa5.05□□□□□ -1.6
CAPN3-210ENST00000561817 PAXXQ9BUH6 204 aa5.05□□□□□ -1.6
CAPN3-210ENST00000561817 DERL1Q9BUN8 251 aa5.05□□□□□ -1.6
CAPN3-210ENST00000561817 ELOVL1Q9BW60 279 aa5.05□□□□□ -1.6
CAPN3-210ENST00000561817 SLC25A39Q9BZJ4 359 aaPredicted RBP5.05□□□□□ -1.6
CAPN3-210ENST00000561817 OR51M1Q9H341 326 aa5.05□□□□□ -1.6
CAPN3-210ENST00000561817 SMCO4Q9NRQ5 59 aa5.05□□□□□ -1.6
CAPN3-210ENST00000561817 THYN1Q9P016 225 aa5.05□□□□□ -1.6
CAPN3-210ENST00000561817 NAT8Q9UHE5 227 aa5.05□□□□□ -1.6
CAPN3-210ENST00000561817 HIGD1AQ9Y241 93 aa5.05□□□□□ -1.6
CAPN3-210ENST00000561817 TLN2Q9Y4G6 2542 aa5.05□□□□□ -1.6
CAPN3-210ENST00000561817 ACANP16112 2415 aa5.05□□□□□ -1.6
CAPN3-210ENST00000561817 CLPSL1A2RUU4 121 aa5.04□□□□□ -1.6
CAPN3-210ENST00000561817 OR2T8A6NH00 312 aa5.04□□□□□ -1.6
CAPN3-210ENST00000561817 FAM223BA6NKX1 122 aa5.04□□□□□ -1.6
CAPN3-210ENST00000561817 B4DEV8 164 aa5.04□□□□□ -1.6
CAPN3-210ENST00000561817 M0R036 132 aa5.04□□□□□ -1.6
CAPN3-210ENST00000561817 GNG7O60262 68 aa5.04□□□□□ -1.6
CAPN3-210ENST00000561817 FABP1P07148 127 aa5.04□□□□□ -1.6
CAPN3-210ENST00000561817 IGLC2P0DOY2 106 aa5.04□□□□□ -1.6
CAPN3-210ENST00000561817 HNF1AP20823 631 aa5.04□□□□□ -1.6
CAPN3-210ENST00000561817 UBE2L3P68036 154 aaKnown RBP5.04□□□□□ -1.6
CAPN3-210ENST00000561817 TMEM241Q24JQ0 296 aa5.04□□□□□ -1.6
CAPN3-210ENST00000561817 Q56UQ5 140 aa5.04□□□□□ -1.6
CAPN3-210ENST00000561817 SERTAD4-AS1Q5TG53 156 aa5.04□□□□□ -1.6
CAPN3-210ENST00000561817 LEMD1Q68G75 181 aa5.04□□□□□ -1.6
CAPN3-210ENST00000561817 ZNF329Q86UD4 541 aa5.04□□□□□ -1.6
CAPN3-210ENST00000561817 FAM223AQ8IWN6 122 aa5.04□□□□□ -1.6
CAPN3-210ENST00000561817 NUDT10Q8NFP7 164 aa5.04□□□□□ -1.6
CAPN3-210ENST00000561817 STXBP6Q8NFX7 210 aa5.04□□□□□ -1.6
CAPN3-210ENST00000561817 OR5R1Q8NH85 324 aa5.04□□□□□ -1.6
CAPN3-210ENST00000561817 NOL4LQ96MY1 436 aaPredicted RBP5.04□□□□□ -1.6
CAPN3-210ENST00000561817 RPS10P5Q9NQ39 176 aa5.04□□□□□ -1.6
CAPN3-210ENST00000561817 LINC00527Q9UJ94 153 aa5.04□□□□□ -1.6
CAPN3-210ENST00000561817 VPREB3Q9UKI3 123 aa5.04□□□□□ -1.6
CAPN3-210ENST00000561817 TRBV7-1A0A0A6YYK4 115 aa5.03□□□□□ -1.6
CAPN3-210ENST00000561817 ZNF98A6NK75 572 aa5.03□□□□□ -1.6
CAPN3-210ENST00000561817 C9JCJ5 164 aa5.03□□□□□ -1.6
CAPN3-210ENST00000561817 AP4M1O00189 453 aa5.03□□□□□ -1.6
CAPN3-210ENST00000561817 TGOLN2O43493 480 aa5.03□□□□□ -1.6
CAPN3-210ENST00000561817 IGLV2-8P01709 118 aa5.03□□□□□ -1.6
CAPN3-210ENST00000561817 IL4P05112 153 aa5.03□□□□□ -1.6
CAPN3-210ENST00000561817 NBEAP1P0C6P0 100 aa5.03□□□□□ -1.6
CAPN3-210ENST00000561817 HIST1H1EP10412 219 aaKnown RBP5.03□□□□□ -1.6
CAPN3-210ENST00000561817 CRYBB3P26998 211 aa5.03□□□□□ -1.6
CAPN3-210ENST00000561817 GPR183P32249 361 aa5.03□□□□□ -1.6
CAPN3-210ENST00000561817 TOMM20LQ6UXN7 152 aa5.03□□□□□ -1.6
CAPN3-210ENST00000561817 LINC01551Q86U37 167 aa5.03□□□□□ -1.6
CAPN3-210ENST00000561817 Q8N2B8 174 aa5.03□□□□□ -1.6
CAPN3-210ENST00000561817 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.03□□□□□ -1.6
CAPN3-210ENST00000561817 Q8WTZ3 238 aa5.03□□□□□ -1.6
CAPN3-210ENST00000561817 HIST1H2BAQ96A08 127 aa5.03□□□□□ -1.6
CAPN3-210ENST00000561817 EEF1AKMT3Q96AZ1 226 aa5.03□□□□□ -1.6
CAPN3-210ENST00000561817 IGF2BP2-AS1Q96M15 143 aa5.03□□□□□ -1.6
CAPN3-210ENST00000561817 MS4A10Q96PG2 267 aa5.03□□□□□ -1.6
CAPN3-210ENST00000561817 KRTAP4-11Q9BYQ6 195 aa5.03□□□□□ -1.6
CAPN3-210ENST00000561817 KLK15Q9H2R5 256 aa5.03□□□□□ -1.6
CAPN3-210ENST00000561817 GEMIN7Q9H840 131 aaKnown RBP5.03□□□□□ -1.6
CAPN3-210ENST00000561817 ZNF702PQ9H963 129 aa5.03□□□□□ -1.6
CAPN3-210ENST00000561817 TMEM242Q9NWH2 141 aa5.03□□□□□ -1.6
CAPN3-210ENST00000561817 ZNF586Q9NXT0 402 aa5.03□□□□□ -1.6
CAPN3-210ENST00000561817 LY96Q9Y6Y9 160 aa5.03□□□□□ -1.6
CAPN3-210ENST00000561817 HIVEP1P15822 2718 aa5.03□□□□□ -1.6
CAPN3-210ENST00000561817 TEP1Q99973 2627 aaKnown RBP5.02□□□□□ -1.61
CAPN3-210ENST00000561817 SONP18583 2426 aaKnown RBP5.02□□□□□ -1.61
CAPN3-210ENST00000561817 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.02□□□□□ -1.61
CAPN3-210ENST00000561817 A0A0U1RRA0 63 aa5.02□□□□□ -1.61
CAPN3-210ENST00000561817 TMEM89A2RUT3 159 aa5.02□□□□□ -1.61
CAPN3-210ENST00000561817 CXorf65A6NEN9 183 aa5.02□□□□□ -1.61
CAPN3-210ENST00000561817 K7EN84 100 aa5.02□□□□□ -1.61
CAPN3-210ENST00000561817 HOXA3O43365 443 aaPredicted RBP5.02□□□□□ -1.61
CAPN3-210ENST00000561817 TRBV12-3P01733 135 aa5.02□□□□□ -1.61
CAPN3-210ENST00000561817 IGHG4P01861 327 aa5.02□□□□□ -1.61
CAPN3-210ENST00000561817 TRGV3P03979 118 aa5.02□□□□□ -1.61
CAPN3-210ENST00000561817 FOLR2P14207 255 aa5.02□□□□□ -1.61
CAPN3-210ENST00000561817 PSMB8P28062 276 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms