RNA–Protein interactions for RNA: ENST00000561377.1

HMBOX1-216, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 307 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-216ENST00000561377 HYLS1Q96M11 299 aa0.03□□□□□ -2.4
HMBOX1-216ENST00000561377 NPCDR1Q9BY65 106 aa0.03□□□□□ -2.4
HMBOX1-216ENST00000561377 IGSF10Q6WRI0 2623 aa0.03□□□□□ -2.4
HMBOX1-216ENST00000561377 MGAMO43451 1857 aa0.03□□□□□ -2.41
HMBOX1-216ENST00000561377 N4BP2Q86UW6 1770 aaPredicted RBP0.02□□□□□ -2.41
HMBOX1-216ENST00000561377 A6NN06 94 aa0.02□□□□□ -2.41
HMBOX1-216ENST00000561377 M0R233 179 aa0.02□□□□□ -2.41
HMBOX1-216ENST00000561377 IGHV3-33P01772 117 aa0.02□□□□□ -2.41
HMBOX1-216ENST00000561377 CCL4P13236 92 aa0.02□□□□□ -2.41
HMBOX1-216ENST00000561377 KDELR1P24390 212 aa0.02□□□□□ -2.41
HMBOX1-216ENST00000561377 ZNF137PP52743 207 aa0.02□□□□□ -2.41
HMBOX1-216ENST00000561377 NABP2Q9BQ15 211 aa0.02□□□□□ -2.41
HMBOX1-216ENST00000561377 FAM103A1Q9BTL3 118 aaKnown RBP0.02□□□□□ -2.41
HMBOX1-216ENST00000561377 TCEAL2Q9H3H9 227 aaPredicted RBP0.02□□□□□ -2.41
HMBOX1-216ENST00000561377 OTOGQ6ZRI0 2925 aa0.02□□□□□ -2.41
HMBOX1-216ENST00000561377 MYH2Q9UKX2 1941 aa0.01□□□□□ -2.41
HMBOX1-216ENST00000561377 TRBV30A0A0K0K1B3 111 aa0.01□□□□□ -2.41
HMBOX1-216ENST00000561377 PPYP01298 95 aa0.01□□□□□ -2.41
HMBOX1-216ENST00000561377 SPINT3P49223 89 aa0.01□□□□□ -2.41
HMBOX1-216ENST00000561377 QRFPP83859 136 aa0.01□□□□□ -2.41
HMBOX1-216ENST00000561377 C6orf52Q5T4I8 152 aa0.01□□□□□ -2.41
HMBOX1-216ENST00000561377 SPINK6Q6UWN8 80 aa0.01□□□□□ -2.41
HMBOX1-216ENST00000561377 LINC00299Q6ZSB3 139 aa0.01□□□□□ -2.41
HMBOX1-216ENST00000561377 ADGRL3Q9HAR2 1447 aa0.01□□□□□ -2.41
HMBOX1-216ENST00000561377 CEP164Q9UPV0 1460 aa0.01□□□□□ -2.41
HMBOX1-216ENST00000561377 LOC285556D6RIA3 1793 aa0.01□□□□□ -2.41
HMBOX1-216ENST00000561377 COL7A1Q02388 2944 aa0□□□□□ -2.41
HMBOX1-216ENST00000561377 TRAV5A0A0B4J249 113 aa0□□□□□ -2.41
HMBOX1-216ENST00000561377 FRMPD1Q5SYB0 1578 aa0□□□□□ -2.41
HMBOX1-216ENST00000561377 Q6ZQY7 126 aa0□□□□□ -2.41
HMBOX1-216ENST00000561377 GGACTQ9BVM4 153 aa0□□□□□ -2.41
HMBOX1-216ENST00000561377 WFDC10AQ9H1F0 79 aa0□□□□□ -2.41
HMBOX1-216ENST00000561377 POPDC3Q9HBV1 291 aa0□□□□□ -2.41
HMBOX1-216ENST00000561377 ARMC1Q9NVT9 282 aa0□□□□□ -2.41
HMBOX1-216ENST00000561377 ARL5AQ9Y689 179 aa0□□□□□ -2.41
HMBOX1-216ENST00000561377 HRNRQ86YZ3 2850 aaPredicted RBP-0□□□□□ -2.41
HMBOX1-216ENST00000561377 NCOR2Q9Y618 2525 aa-0.01□□□□□ -2.41
HMBOX1-216ENST00000561377 PIK3C2AO00443 1686 aa-0.01□□□□□ -2.41
HMBOX1-216ENST00000561377 IFNA4P05014 189 aa-0.01□□□□□ -2.41
HMBOX1-216ENST00000561377 CRHP06850 196 aa-0.01□□□□□ -2.41
HMBOX1-216ENST00000561377 FADDQ13158 208 aa-0.01□□□□□ -2.41
HMBOX1-216ENST00000561377 SCGB2B2Q4G0G5 96 aa-0.01□□□□□ -2.41
HMBOX1-216ENST00000561377 C10orf99Q6UWK7 81 aa-0.01□□□□□ -2.41
HMBOX1-216ENST00000561377 TMEM14EPQ6UXP3 125 aa-0.01□□□□□ -2.41
HMBOX1-216ENST00000561377 CHCHD1Q96BP2 118 aaKnown RBP-0.01□□□□□ -2.41
HMBOX1-216ENST00000561377 BOKQ9UMX3 212 aaPredicted RBP-0.01□□□□□ -2.41
HMBOX1-216ENST00000561377 ARL2BPQ9Y2Y0 163 aa-0.01□□□□□ -2.41
HMBOX1-216ENST00000561377 FAM32AQ9Y421 112 aaKnown RBP-0.01□□□□□ -2.41
HMBOX1-216ENST00000561377 DMBT1Q9UGM3 2413 aaPredicted RBP-0.01□□□□□ -2.41
HMBOX1-216ENST00000561377 PTPRZ1P23471 2315 aaPredicted RBP-0.02□□□□□ -2.41
HMBOX1-216ENST00000561377 CAMSAP2Q08AD1 1489 aa-0.02□□□□□ -2.41
HMBOX1-216ENST00000561377 MIA2Q96PC5 1412 aa-0.02□□□□□ -2.41
HMBOX1-216ENST00000561377 A0A0J9YY99 117 aa-0.02□□□□□ -2.41
HMBOX1-216ENST00000561377 DUXBA0A1W2PPF3 345 aa-0.02□□□□□ -2.41
HMBOX1-216ENST00000561377 ODAMA1E959 279 aa-0.02□□□□□ -2.41
HMBOX1-216ENST00000561377 ZNF727A8MUV8 499 aa-0.02□□□□□ -2.41
HMBOX1-216ENST00000561377 C5orf67F2Z3F1 127 aa-0.02□□□□□ -2.41
HMBOX1-216ENST00000561377 AIPO00170 330 aa-0.02□□□□□ -2.41
HMBOX1-216ENST00000561377 GPR31O00270 319 aa-0.02□□□□□ -2.41
HMBOX1-216ENST00000561377 HMGB3O15347 200 aaKnown RBP-0.02□□□□□ -2.41
HMBOX1-216ENST00000561377 EIF3IQ13347 325 aaKnown RBP-0.02□□□□□ -2.41
HMBOX1-216ENST00000561377 SPINK13Q1W4C9 94 aa-0.02□□□□□ -2.41
HMBOX1-216ENST00000561377 PRR15Q8IV56 129 aa-0.02□□□□□ -2.41
HMBOX1-216ENST00000561377 IFT20Q8IY31 132 aa-0.02□□□□□ -2.41
HMBOX1-216ENST00000561377 C10orf111Q8N326 155 aa-0.02□□□□□ -2.41
HMBOX1-216ENST00000561377 LRRC18Q8N456 261 aa-0.02□□□□□ -2.41
HMBOX1-216ENST00000561377 PXT1Q8NFP0 134 aa-0.02□□□□□ -2.41
HMBOX1-216ENST00000561377 SPRR2GQ9BYE4 73 aa-0.02□□□□□ -2.41
HMBOX1-216ENST00000561377 LPAR5Q9H1C0 372 aa-0.02□□□□□ -2.41
HMBOX1-216ENST00000561377 CACYBPQ9HB71 228 aaKnown RBP-0.02□□□□□ -2.41
HMBOX1-216ENST00000561377 ENY2Q9NPA8 101 aa-0.02□□□□□ -2.41
HMBOX1-216ENST00000561377 OPTCQ9UBM4 332 aa-0.02□□□□□ -2.41
HMBOX1-216ENST00000561377 PYCARDQ9ULZ3 195 aa-0.02□□□□□ -2.41
HMBOX1-216ENST00000561377 IGF2RP11717 2491 aa-0.02□□□□□ -2.41
HMBOX1-216ENST00000561377 BCORL1Q5H9F3 1711 aa-0.02□□□□□ -2.41
HMBOX1-216ENST00000561377 ADGBQ8N7X0 1667 aa-0.02□□□□□ -2.41
HMBOX1-216ENST00000561377 NSD1Q96L73 2696 aaPredicted RBP-0.02□□□□□ -2.41
HMBOX1-216ENST00000561377 HIVEP3Q5T1R4 2406 aa-0.03□□□□□ -2.41
HMBOX1-216ENST00000561377 MYH3P11055 1940 aa-0.03□□□□□ -2.41
HMBOX1-216ENST00000561377 TRAV23DV6A0A075B6W5 121 aa-0.03□□□□□ -2.41
HMBOX1-216ENST00000561377 hDV103S1A0JD37 113 aa-0.03□□□□□ -2.41
HMBOX1-216ENST00000561377 NUPR2A6NF83 97 aa-0.03□□□□□ -2.41
HMBOX1-216ENST00000561377 LYRM1O43325 122 aa-0.03□□□□□ -2.41
HMBOX1-216ENST00000561377 SERPINA1P01009 418 aa-0.03□□□□□ -2.41
HMBOX1-216ENST00000561377 NFYBP25208 207 aa-0.03□□□□□ -2.41
HMBOX1-216ENST00000561377 TAF1AQ15573 450 aaPredicted RBP-0.03□□□□□ -2.41
HMBOX1-216ENST00000561377 S100A7AQ86SG5 101 aa-0.03□□□□□ -2.41
HMBOX1-216ENST00000561377 ZHX1-C8orf76Q96EF9 292 aa-0.03□□□□□ -2.41
HMBOX1-216ENST00000561377 MAP1LC3BQ9GZQ8 125 aa-0.03□□□□□ -2.41
HMBOX1-216ENST00000561377 TPRP12270 2363 aaKnown RBP-0.03□□□□□ -2.41
HMBOX1-216ENST00000561377 FLNCQ14315 2725 aa-0.03□□□□□ -2.41
HMBOX1-216ENST00000561377 UHRF1BP1Q6BDS2 1440 aa-0.04□□□□□ -2.42
HMBOX1-216ENST00000561377 CELSR1Q9NYQ6 3014 aa-0.04□□□□□ -2.42
HMBOX1-216ENST00000561377 KDM6BO15054 1643 aa-0.04□□□□□ -2.42
HMBOX1-216ENST00000561377 A0A096LPI6 279 aa-0.04□□□□□ -2.42
HMBOX1-216ENST00000561377 PRORSD1PA6NEY8 169 aa-0.04□□□□□ -2.42
HMBOX1-216ENST00000561377 NDUFC2O95298 119 aa-0.04□□□□□ -2.42
HMBOX1-216ENST00000561377 IFNA14P01570 189 aa-0.04□□□□□ -2.42
HMBOX1-216ENST00000561377 APOA2P02652 100 aa-0.04□□□□□ -2.42
HMBOX1-216ENST00000561377 IFNA6P05013 189 aa-0.04□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms