RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 ESM1Q9NQ30 184 aa13.14□□□□□ -0.31
HDDC3-206ENST00000561036 FASNP49327 2511 aaKnown RBP13.13□□□□□ -0.31
HDDC3-206ENST00000561036 A0A1W2PS18 150 aa13.13□□□□□ -0.31
HDDC3-206ENST00000561036 ZNF785A8K8V0 405 aa13.13□□□□□ -0.31
HDDC3-206ENST00000561036 UBE2G1P62253 170 aa13.13□□□□□ -0.31
HDDC3-206ENST00000561036 GNG5P63218 68 aa13.13□□□□□ -0.31
HDDC3-206ENST00000561036 JMJD8Q96S16 334 aa13.13□□□□□ -0.31
HDDC3-206ENST00000561036 PGPEP1LA6NFU8 196 aa13.12□□□□□ -0.31
HDDC3-206ENST00000561036 K7EQM0 130 aa13.12□□□□□ -0.31
HDDC3-206ENST00000561036 SLC17A3O00476 420 aa13.12□□□□□ -0.31
HDDC3-206ENST00000561036 ISLRO14498 428 aa13.12□□□□□ -0.31
HDDC3-206ENST00000561036 GCGP01275 180 aa13.12□□□□□ -0.31
HDDC3-206ENST00000561036 IGLV2-8P01709 118 aa13.12□□□□□ -0.31
HDDC3-206ENST00000561036 CRYBA1P05813 215 aa13.12□□□□□ -0.31
HDDC3-206ENST00000561036 CSN1S1P47710 185 aa13.12□□□□□ -0.31
HDDC3-206ENST00000561036 HILS1P60008 231 aa13.12□□□□□ -0.31
HDDC3-206ENST00000561036 UNQ9165/PRO28630Q6UXU0 137 aa13.12□□□□□ -0.31
HDDC3-206ENST00000561036 BAGE2Q86Y30 109 aa13.12□□□□□ -0.31
HDDC3-206ENST00000561036 KLHDC1Q8N7A1 406 aa13.12□□□□□ -0.31
HDDC3-206ENST00000561036 GLMPQ8WWB7 406 aa13.12□□□□□ -0.31
HDDC3-206ENST00000561036 LINC00479Q96M42 142 aa13.12□□□□□ -0.31
HDDC3-206ENST00000561036 OR5B12Q96R08 314 aa13.12□□□□□ -0.31
HDDC3-206ENST00000561036 IMMP2LQ96T52 175 aa13.12□□□□□ -0.31
HDDC3-206ENST00000561036 SLC50A1Q9BRV3 221 aa13.12□□□□□ -0.31
HDDC3-206ENST00000561036 C16orf95Q9H693 158 aa13.12□□□□□ -0.31
HDDC3-206ENST00000561036 HECTD1Q9ULT8 2610 aa13.11□□□□□ -0.31
HDDC3-206ENST00000561036 FBLL1A6NHQ2 334 aaKnown RBP13.11□□□□□ -0.31
HDDC3-206ENST00000561036 K7EN84 100 aa13.11□□□□□ -0.31
HDDC3-206ENST00000561036 ZNF207O43670 478 aaKnown RBP13.11□□□□□ -0.31
HDDC3-206ENST00000561036 APOHP02749 345 aaPredicted RBP13.11□□□□□ -0.31
HDDC3-206ENST00000561036 S100PP25815 95 aa13.11□□□□□ -0.31
HDDC3-206ENST00000561036 FAM24BQ8N5W8 94 aa13.11□□□□□ -0.31
HDDC3-206ENST00000561036 OR10G8Q8NGN5 311 aa13.11□□□□□ -0.31
HDDC3-206ENST00000561036 WFDC12Q8WWY7 111 aa13.11□□□□□ -0.31
HDDC3-206ENST00000561036 ZNF331Q9NQX6 463 aaPredicted RBP13.11□□□□□ -0.31
HDDC3-206ENST00000561036 DAZ1Q9NQZ3 744 aaKnown RBP13.11□□□□□ -0.31
HDDC3-206ENST00000561036 AURKAIP1Q9NWT8 199 aaPredicted RBP13.11□□□□□ -0.31
HDDC3-206ENST00000561036 CLEC5AQ9NY25 188 aa13.11□□□□□ -0.31
HDDC3-206ENST00000561036 TMA7Q9Y2S6 64 aaKnown RBP13.11□□□□□ -0.31
HDDC3-206ENST00000561036 UFC1Q9Y3C8 167 aa13.11□□□□□ -0.31
HDDC3-206ENST00000561036 TRAV34A0A0B4J273 112 aa13.1□□□□□ -0.31
HDDC3-206ENST00000561036 IGHV7-4-1A0A0J9YVY3 117 aa13.1□□□□□ -0.31
HDDC3-206ENST00000561036 FOLR2P14207 255 aa13.1□□□□□ -0.31
HDDC3-206ENST00000561036 BMI1P35226 326 aa13.1□□□□□ -0.31
HDDC3-206ENST00000561036 CDX1P47902 265 aaPredicted RBP13.1□□□□□ -0.31
HDDC3-206ENST00000561036 ELOBQ15370 118 aa13.1□□□□□ -0.31
HDDC3-206ENST00000561036 RPEL1Q2QD12 228 aa13.1□□□□□ -0.31
HDDC3-206ENST00000561036 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.1□□□□□ -0.31
HDDC3-206ENST00000561036 TMEM75Q8N9X5 138 aa13.1□□□□□ -0.31
HDDC3-206ENST00000561036 SMR3AQ99954 134 aa13.1□□□□□ -0.31
HDDC3-206ENST00000561036 BIN3Q9NQY0 253 aa13.1□□□□□ -0.31
HDDC3-206ENST00000561036 OSTCQ9NRP0 149 aa13.1□□□□□ -0.31
HDDC3-206ENST00000561036 RPH3ALQ9UNE2 315 aa13.1□□□□□ -0.31
HDDC3-206ENST00000561036 ZNF320A2RRD8 509 aa13.09□□□□□ -0.31
HDDC3-206ENST00000561036 DIRC3C9JPN6 131 aa13.09□□□□□ -0.31
HDDC3-206ENST00000561036 LGALS9O00182 355 aa13.09□□□□□ -0.31
HDDC3-206ENST00000561036 LTAP01374 205 aa13.09□□□□□ -0.31
HDDC3-206ENST00000561036 PFN1P07737 140 aaKnown RBP13.09□□□□□ -0.31
HDDC3-206ENST00000561036 GOLT1AQ6ZVE7 132 aa13.09□□□□□ -0.31
HDDC3-206ENST00000561036 REC114Q7Z4M0 266 aa13.09□□□□□ -0.31
HDDC3-206ENST00000561036 TRBV24-1A0A075B6N3 115 aa13.08□□□□□ -0.32
HDDC3-206ENST00000561036 IGHV3-66A0A0C4DH42 116 aa13.08□□□□□ -0.32
HDDC3-206ENST00000561036 RAB5AP20339 215 aa13.08□□□□□ -0.32
HDDC3-206ENST00000561036 ERVFC1-1P60608 527 aa13.08□□□□□ -0.32
HDDC3-206ENST00000561036 KCNIP4Q6PIL6 250 aa13.08□□□□□ -0.32
HDDC3-206ENST00000561036 FAM231DQ6ZW35 169 aa13.08□□□□□ -0.32
HDDC3-206ENST00000561036 WIPF2Q8TF74 440 aaPredicted RBP13.08□□□□□ -0.32
HDDC3-206ENST00000561036 MRPL53Q96EL3 112 aaKnown RBP13.08□□□□□ -0.32
HDDC3-206ENST00000561036 BTF3L4Q96K17 158 aa13.08□□□□□ -0.32
HDDC3-206ENST00000561036 MLST8Q9BVC4 326 aa13.08□□□□□ -0.32
HDDC3-206ENST00000561036 SMPXQ9UHP9 88 aa13.08□□□□□ -0.32
HDDC3-206ENST00000561036 IGHV3-49A0A0A0MS15 119 aa13.07□□□□□ -0.32
HDDC3-206ENST00000561036 IGLV2-11P01706 119 aa13.07□□□□□ -0.32
HDDC3-206ENST00000561036 MGST1P10620 155 aaKnown RBP13.07□□□□□ -0.32
HDDC3-206ENST00000561036 FOXL1Q12952 345 aa13.07□□□□□ -0.32
HDDC3-206ENST00000561036 C4orf3Q8WVX3 66 aa13.07□□□□□ -0.32
HDDC3-206ENST00000561036 PYGO2Q9BRQ0 406 aa13.07□□□□□ -0.32
HDDC3-206ENST00000561036 ZFP30Q9Y2G7 519 aa13.07□□□□□ -0.32
HDDC3-206ENST00000561036 URGCP-MRPS24S4R325 110 aa13.07□□□□□ -0.32
HDDC3-206ENST00000561036 MXRA5Q9NR99 2828 aa13.06□□□□□ -0.32
HDDC3-206ENST00000561036 CSMD1Q96PZ7 3565 aa13.06□□□□□ -0.32
HDDC3-206ENST00000561036 IGHV3OR16-13A0A075B7E8 117 aa13.06□□□□□ -0.32
HDDC3-206ENST00000561036 IGHV3-74A0A0B4J1X5 117 aa13.06□□□□□ -0.32
HDDC3-206ENST00000561036 A8MWP6 167 aa13.06□□□□□ -0.32
HDDC3-206ENST00000561036 NDUFA7O95182 113 aa13.06□□□□□ -0.32
HDDC3-206ENST00000561036 FLI1Q01543 452 aaPredicted RBP13.06□□□□□ -0.32
HDDC3-206ENST00000561036 OR5I1Q13606 314 aa13.06□□□□□ -0.32
HDDC3-206ENST00000561036 PSG3Q16557 428 aa13.06□□□□□ -0.32
HDDC3-206ENST00000561036 TM4SF20Q53R12 229 aa13.06□□□□□ -0.32
HDDC3-206ENST00000561036 Q86TA4 180 aa13.06□□□□□ -0.32
HDDC3-206ENST00000561036 TMEM183AQ8IXX5 376 aa13.06□□□□□ -0.32
HDDC3-206ENST00000561036 TRAV9-1A0A075B6T8 112 aa13.05□□□□□ -0.32
HDDC3-206ENST00000561036 IGHV4OR15-8A0A075B7B6 117 aa13.05□□□□□ -0.32
HDDC3-206ENST00000561036 A0A087WW49 117 aa13.05□□□□□ -0.32
HDDC3-206ENST00000561036 M0R3E3 92 aa13.05□□□□□ -0.32
HDDC3-206ENST00000561036 CHEK1O14757 476 aa13.05□□□□□ -0.32
HDDC3-206ENST00000561036 SAMD13Q5VXD3 122 aa13.05□□□□□ -0.32
HDDC3-206ENST00000561036 LCN12Q6JVE5 192 aa13.05□□□□□ -0.32
HDDC3-206ENST00000561036 C8orf86Q6ZUL3 223 aa13.05□□□□□ -0.32
HDDC3-206ENST00000561036 C1QL4Q86Z23 238 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms