RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 GAGE12IP0CL82 117 aa12.69□□□□□ -0.38
TPM1-226ENST00000560959 SLC25A6P12236 298 aa12.69□□□□□ -0.38
TPM1-226ENST00000560959 ANXA3P12429 323 aa12.69□□□□□ -0.38
TPM1-226ENST00000560959 ICAM4Q14773 271 aa12.69□□□□□ -0.38
TPM1-226ENST00000560959 S100A7AQ86SG5 101 aa12.69□□□□□ -0.38
TPM1-226ENST00000560959 OR51S1Q8NGJ8 323 aa12.69□□□□□ -0.38
TPM1-226ENST00000560959 SNURFLB1AK76 121 aa12.68□□□□□ -0.38
TPM1-226ENST00000560959 FAM229AH3BQW9 127 aa12.68□□□□□ -0.38
TPM1-226ENST00000560959 PLP1P60201 277 aa12.68□□□□□ -0.38
TPM1-226ENST00000560959 KRTAP10-1P60331 282 aa12.68□□□□□ -0.38
TPM1-226ENST00000560959 RAP2BP61225 183 aa12.68□□□□□ -0.38
TPM1-226ENST00000560959 DAZ2Q13117 558 aaKnown RBP12.68□□□□□ -0.38
TPM1-226ENST00000560959 SMIM4Q8WVI0 70 aa12.68□□□□□ -0.38
TPM1-226ENST00000560959 RPUSD4Q96CM3 377 aaKnown RBP12.68□□□□□ -0.38
TPM1-226ENST00000560959 VSIG2Q96IQ7 327 aa12.68□□□□□ -0.38
TPM1-226ENST00000560959 SCP2D1Q9UJQ7 156 aa12.68□□□□□ -0.38
TPM1-226ENST00000560959 PAIP2BQ9ULR5 123 aaKnown RBP12.68□□□□□ -0.38
TPM1-226ENST00000560959 RNF24Q9Y225 148 aa12.68□□□□□ -0.38
TPM1-226ENST00000560959 HIGD1AQ9Y241 93 aa12.68□□□□□ -0.38
TPM1-226ENST00000560959 IAPPP10997 89 aa12.67□□□□□ -0.38
TPM1-226ENST00000560959 CLVS1Q8IUQ0 354 aaPredicted RBP12.67□□□□□ -0.38
TPM1-226ENST00000560959 LRRC20Q8TCA0 184 aa12.67□□□□□ -0.38
TPM1-226ENST00000560959 A0A087WTM6 91 aa12.66□□□□□ -0.38
TPM1-226ENST00000560959 CTDSPLO15194 276 aa12.66□□□□□ -0.38
TPM1-226ENST00000560959 HYPMO75409 117 aa12.66□□□□□ -0.38
TPM1-226ENST00000560959 CXCL2P19875 107 aa12.66□□□□□ -0.38
TPM1-226ENST00000560959 FUSP35637 526 aaKnown RBP eCLIP12.66□□□□□ -0.38
TPM1-226ENST00000560959 C4orf46Q504U0 113 aa12.66□□□□□ -0.38
TPM1-226ENST00000560959 ACOT7LQ6ZUV0 252 aa12.66□□□□□ -0.38
TPM1-226ENST00000560959 IL5P05113 134 aa12.65□□□□□ -0.38
TPM1-226ENST00000560959 AKR1C1Q04828 323 aa12.65□□□□□ -0.38
TPM1-226ENST00000560959 CYP2G1PQ6ZSU1 146 aa12.65□□□□□ -0.38
TPM1-226ENST00000560959 TMPRSS5Q9H3S3 457 aa12.65□□□□□ -0.38
TPM1-226ENST00000560959 MDFICQ9P1T7 246 aa12.65□□□□□ -0.38
TPM1-226ENST00000560959 RABL2AQ9UBK7 228 aaPredicted RBP12.65□□□□□ -0.38
TPM1-226ENST00000560959 RABL2BQ9UNT1 228 aa12.65□□□□□ -0.38
TPM1-226ENST00000560959 K7EP13 123 aa12.64□□□□□ -0.39
TPM1-226ENST00000560959 SYNGR2O43760 224 aa12.64□□□□□ -0.39
TPM1-226ENST00000560959 SMR3BP02814 79 aaPredicted RBP12.64□□□□□ -0.39
TPM1-226ENST00000560959 SELENOTP62341 195 aa12.64□□□□□ -0.39
TPM1-226ENST00000560959 KIR3DS1Q14943 382 aa12.64□□□□□ -0.39
TPM1-226ENST00000560959 GFI1BQ5VTD9 330 aa12.64□□□□□ -0.39
TPM1-226ENST00000560959 MIXL1Q9H2W2 232 aa12.64□□□□□ -0.39
TPM1-226ENST00000560959 TRAV9-2A0A087WT02 112 aa12.63□□□□□ -0.39
TPM1-226ENST00000560959 ANKRD20A5PA0PJZ0 165 aa12.63□□□□□ -0.39
TPM1-226ENST00000560959 J3QL48 77 aa12.63□□□□□ -0.39
TPM1-226ENST00000560959 GCSHP23434 173 aa12.63□□□□□ -0.39
TPM1-226ENST00000560959 Q6ZSN1 163 aa12.63□□□□□ -0.39
TPM1-226ENST00000560959 LRTM2Q8N967 370 aa12.63□□□□□ -0.39
TPM1-226ENST00000560959 PYGO2Q9BRQ0 406 aa12.63□□□□□ -0.39
TPM1-226ENST00000560959 SLC50A1Q9BRV3 221 aa12.63□□□□□ -0.39
TPM1-226ENST00000560959 ZNF331Q9NQX6 463 aaPredicted RBP12.63□□□□□ -0.39
TPM1-226ENST00000560959 MRPS12O15235 138 aaKnown RBP12.62□□□□□ -0.39
TPM1-226ENST00000560959 NXPH4O95158 308 aa12.62□□□□□ -0.39
TPM1-226ENST00000560959 OR5G3P0C626 314 aa12.62□□□□□ -0.39
TPM1-226ENST00000560959 CTF1Q16619 201 aa12.62□□□□□ -0.39
TPM1-226ENST00000560959 LCN15Q6UWW0 184 aa12.62□□□□□ -0.39
TPM1-226ENST00000560959 Q6ZTI0 123 aa12.62□□□□□ -0.39
TPM1-226ENST00000560959 TMED4Q7Z7H5 227 aa12.62□□□□□ -0.39
TPM1-226ENST00000560959 CCDC190Q86UF4 302 aa12.62□□□□□ -0.39
TPM1-226ENST00000560959 ODF3Q96PU9 254 aa12.62□□□□□ -0.39
TPM1-226ENST00000560959 TNFRSF18Q9Y5U5 241 aa12.62□□□□□ -0.39
TPM1-226ENST00000560959 PMS2P5A8MQ11 134 aa12.61□□□□□ -0.39
TPM1-226ENST00000560959 WRBO00258 174 aa12.61□□□□□ -0.39
TPM1-226ENST00000560959 RGS5O15539 181 aa12.61□□□□□ -0.39
TPM1-226ENST00000560959 LINC00869P0C866 280 aa12.61□□□□□ -0.39
TPM1-226ENST00000560959 SPANXN5Q5MJ07 72 aa12.61□□□□□ -0.39
TPM1-226ENST00000560959 STRAPQ9Y3F4 350 aaKnown RBP12.61□□□□□ -0.39
TPM1-226ENST00000560959 TRGV2A0A075B6R0 118 aa12.6□□□□□ -0.39
TPM1-226ENST00000560959 ZNF324O75467 553 aaPredicted RBP12.6□□□□□ -0.39
TPM1-226ENST00000560959 DNAH10OSP0CZ25 163 aa12.6□□□□□ -0.39
TPM1-226ENST00000560959 ANXA7P20073 488 aaKnown RBP12.6□□□□□ -0.39
TPM1-226ENST00000560959 TMEM128Q5BJH2 165 aa12.6□□□□□ -0.39
TPM1-226ENST00000560959 TMEM70Q9BUB7 260 aa12.6□□□□□ -0.39
TPM1-226ENST00000560959 ICOSQ9Y6W8 199 aa12.6□□□□□ -0.39
TPM1-226ENST00000560959 K7EPK0 472 aa12.59□□□□□ -0.39
TPM1-226ENST00000560959 CTDSP2O14595 271 aa12.59□□□□□ -0.39
TPM1-226ENST00000560959 PXDC1Q5TGL8 231 aa12.59□□□□□ -0.39
TPM1-226ENST00000560959 ZNF680Q8NEM1 530 aa12.59□□□□□ -0.39
TPM1-226ENST00000560959 ZNF431Q8TF32 576 aaPredicted RBP12.59□□□□□ -0.39
TPM1-226ENST00000560959 LEPP41159 167 aa12.58□□□□□ -0.4
TPM1-226ENST00000560959 SLAQ13239 276 aa12.58□□□□□ -0.4
TPM1-226ENST00000560959 PATE2Q6UY27 113 aa12.58□□□□□ -0.4
TPM1-226ENST00000560959 LINC00467Q9BRT7 94 aa12.58□□□□□ -0.4
TPM1-226ENST00000560959 PARD6GQ9BYG4 376 aaPredicted RBP12.58□□□□□ -0.4
TPM1-226ENST00000560959 ARV1Q9H2C2 271 aa12.58□□□□□ -0.4
TPM1-226ENST00000560959 MCUBQ9NWR8 336 aa12.58□□□□□ -0.4
TPM1-226ENST00000560959 SMCO3A2RU48 225 aa12.57□□□□□ -0.4
TPM1-226ENST00000560959 FNDC10F2Z333 226 aa12.57□□□□□ -0.4
TPM1-226ENST00000560959 PAX4O43316 350 aa12.57□□□□□ -0.4
TPM1-226ENST00000560959 IL18Q14116 193 aa12.57□□□□□ -0.4
TPM1-226ENST00000560959 LYPD5Q6UWN5 251 aa12.57□□□□□ -0.4
TPM1-226ENST00000560959 C11orf72Q8NBR9 251 aa12.57□□□□□ -0.4
TPM1-226ENST00000560959 NAA50Q9GZZ1 169 aaKnown RBP12.57□□□□□ -0.4
TPM1-226ENST00000560959 ARL6Q9H0F7 186 aa12.57□□□□□ -0.4
TPM1-226ENST00000560959 LY96Q9Y6Y9 160 aa12.57□□□□□ -0.4
TPM1-226ENST00000560959 TRAV12-3A0A0B4J271 114 aa12.56□□□□□ -0.4
TPM1-226ENST00000560959 PRAC2D3DTV9 90 aa12.56□□□□□ -0.4
TPM1-226ENST00000560959 CT45A10P0DMU9 189 aa12.56□□□□□ -0.4
TPM1-226ENST00000560959 PRB4P10163 310 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms