RNA–Protein interactions for RNA: ENST00000560867.1

HMG20A-211, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-211ENST00000560867 CC2D2AQ9P2K1 1620 aa1.33□□□□□ -2.2
HMG20A-211ENST00000560867 MED23Q9ULK4 1368 aa1.33□□□□□ -2.2
HMG20A-211ENST00000560867 MALRD1Q5VYJ5 2156 aa1.32□□□□□ -2.2
HMG20A-211ENST00000560867 FASNP49327 2511 aaKnown RBP1.32□□□□□ -2.2
HMG20A-211ENST00000560867 KIF13BQ9NQT8 1826 aa1.32□□□□□ -2.2
HMG20A-211ENST00000560867 TRBV7-6A0A0J9YX20 115 aa1.32□□□□□ -2.2
HMG20A-211ENST00000560867 C7orf71A4D174 169 aa1.32□□□□□ -2.2
HMG20A-211ENST00000560867 OR2H2O95918 312 aa1.32□□□□□ -2.2
HMG20A-211ENST00000560867 MT-ND4LP03901 98 aa1.32□□□□□ -2.2
HMG20A-211ENST00000560867 CTSDP07339 412 aaPredicted RBP1.32□□□□□ -2.2
HMG20A-211ENST00000560867 COX6A1P12074 109 aa1.32□□□□□ -2.2
HMG20A-211ENST00000560867 SDC2P34741 201 aa1.32□□□□□ -2.2
HMG20A-211ENST00000560867 VMA21Q3ZAQ7 101 aa1.32□□□□□ -2.2
HMG20A-211ENST00000560867 EIF5AL1Q6IS14 154 aaKnown RBP1.32□□□□□ -2.2
HMG20A-211ENST00000560867 LINC00305Q7Z4B0 112 aa1.32□□□□□ -2.2
HMG20A-211ENST00000560867 IFT20Q8IY31 132 aa1.32□□□□□ -2.2
HMG20A-211ENST00000560867 ZNF418Q8TF45 676 aaPredicted RBP1.32□□□□□ -2.2
HMG20A-211ENST00000560867 LXNQ9BS40 222 aa1.32□□□□□ -2.2
HMG20A-211ENST00000560867 TCEAL2Q9H3H9 227 aaPredicted RBP1.32□□□□□ -2.2
HMG20A-211ENST00000560867 HS3ST2Q9Y278 367 aa1.32□□□□□ -2.2
HMG20A-211ENST00000560867 TEP1Q99973 2627 aaKnown RBP1.32□□□□□ -2.2
HMG20A-211ENST00000560867 OVOS2A0A0G2JMS6 1433 aa1.32□□□□□ -2.2
HMG20A-211ENST00000560867 TRAPPC8Q9Y2L5 1435 aa1.32□□□□□ -2.2
HMG20A-211ENST00000560867 ABCA2Q9BZC7 2435 aa1.31□□□□□ -2.2
HMG20A-211ENST00000560867 CAMSAP2Q08AD1 1489 aa1.31□□□□□ -2.2
HMG20A-211ENST00000560867 DOPEY1Q5JWR5 2465 aa1.31□□□□□ -2.2
HMG20A-211ENST00000560867 COL6A6A6NMZ7 2263 aa1.31□□□□□ -2.2
HMG20A-211ENST00000560867 A0A096LPI6 279 aa1.31□□□□□ -2.2
HMG20A-211ENST00000560867 A0A1B0GV90 55 aa1.31□□□□□ -2.2
HMG20A-211ENST00000560867 H3BMG7 143 aa1.31□□□□□ -2.2
HMG20A-211ENST00000560867 DPM2O94777 84 aa1.31□□□□□ -2.2
HMG20A-211ENST00000560867 METTL15P1P0C7V9 234 aa1.31□□□□□ -2.2
HMG20A-211ENST00000560867 EVI2AP22794 236 aa1.31□□□□□ -2.2
HMG20A-211ENST00000560867 RPL22P35268 128 aaKnown RBP1.31□□□□□ -2.2
HMG20A-211ENST00000560867 AQP4P55087 323 aa1.31□□□□□ -2.2
HMG20A-211ENST00000560867 NDUFA6P56556 154 aa1.31□□□□□ -2.2
HMG20A-211ENST00000560867 DNAJB13P59910 316 aa1.31□□□□□ -2.2
HMG20A-211ENST00000560867 GLYATL3Q5SZD4 288 aa1.31□□□□□ -2.2
HMG20A-211ENST00000560867 TMEM244Q5VVB8 128 aa1.31□□□□□ -2.2
HMG20A-211ENST00000560867 RPL13AP3Q6NVV1 102 aa1.31□□□□□ -2.2
HMG20A-211ENST00000560867 TMEM14EPQ6UXP3 125 aa1.31□□□□□ -2.2
HMG20A-211ENST00000560867 DEFB128Q7Z7B8 93 aa1.31□□□□□ -2.2
HMG20A-211ENST00000560867 Q8IYB0 196 aa1.31□□□□□ -2.2
HMG20A-211ENST00000560867 TEX29Q8N6K0 151 aa1.31□□□□□ -2.2
HMG20A-211ENST00000560867 SLC30A7Q8NEW0 376 aa1.31□□□□□ -2.2
HMG20A-211ENST00000560867 VPS25Q9BRG1 176 aa1.31□□□□□ -2.2
HMG20A-211ENST00000560867 BCL2L10Q9HD36 194 aa1.31□□□□□ -2.2
HMG20A-211ENST00000560867 NIT2Q9NQR4 276 aa1.31□□□□□ -2.2
HMG20A-211ENST00000560867 PAIP2BQ9ULR5 123 aaKnown RBP1.31□□□□□ -2.2
HMG20A-211ENST00000560867 CCDC171Q6TFL3 1326 aa1.31□□□□□ -2.2
HMG20A-211ENST00000560867 FREM1Q5H8C1 2179 aa1.31□□□□□ -2.2
HMG20A-211ENST00000560867 HMGXB3Q12766 1538 aa1.3□□□□□ -2.2
HMG20A-211ENST00000560867 PEG3Q9GZU2 1588 aa1.3□□□□□ -2.2
HMG20A-211ENST00000560867 FLNBO75369 2602 aaKnown RBP1.3□□□□□ -2.2
HMG20A-211ENST00000560867 WDR90Q96KV7 1748 aa1.3□□□□□ -2.2
HMG20A-211ENST00000560867 TRAV13-1A0A0B4J241 112 aa1.3□□□□□ -2.2
HMG20A-211ENST00000560867 TRBV27A0A0K0K1C4 114 aa1.3□□□□□ -2.2
HMG20A-211ENST00000560867 LINC00587B1AMM8 73 aa1.3□□□□□ -2.2
HMG20A-211ENST00000560867 C5orf58C9J3I9 102 aa1.3□□□□□ -2.2
HMG20A-211ENST00000560867 SDCBPO00560 298 aaPredicted RBP1.3□□□□□ -2.2
HMG20A-211ENST00000560867 RER1O15258 196 aa1.3□□□□□ -2.2
HMG20A-211ENST00000560867 HIST1H2BKO60814 126 aa1.3□□□□□ -2.2
HMG20A-211ENST00000560867 SULT1C4O75897 302 aa1.3□□□□□ -2.2
HMG20A-211ENST00000560867 HIST1H2BJP06899 126 aa1.3□□□□□ -2.2
HMG20A-211ENST00000560867 TRGC1P0CF51 173 aa1.3□□□□□ -2.2
HMG20A-211ENST00000560867 KDELR1P24390 212 aa1.3□□□□□ -2.2
HMG20A-211ENST00000560867 RPL35P42766 123 aaKnown RBP1.3□□□□□ -2.2
HMG20A-211ENST00000560867 ZNF345Q14585 488 aa1.3□□□□□ -2.2
HMG20A-211ENST00000560867 C9orf163Q8N9P6 203 aa1.3□□□□□ -2.2
HMG20A-211ENST00000560867 WFDC11Q8NEX6 87 aa1.3□□□□□ -2.2
HMG20A-211ENST00000560867 TSTD1Q8NFU3 115 aa1.3□□□□□ -2.2
HMG20A-211ENST00000560867 OR8B3Q8NGG8 313 aa1.3□□□□□ -2.2
HMG20A-211ENST00000560867 OR51A4Q8NGJ6 313 aa1.3□□□□□ -2.2
HMG20A-211ENST00000560867 BRK1Q8WUW1 75 aa1.3□□□□□ -2.2
HMG20A-211ENST00000560867 NAT14Q8WUY8 206 aa1.3□□□□□ -2.2
HMG20A-211ENST00000560867 ZNF714Q96N38 554 aa1.3□□□□□ -2.2
HMG20A-211ENST00000560867 CGREF1Q99674 301 aa1.3□□□□□ -2.2
HMG20A-211ENST00000560867 SMIM3Q9BZL3 60 aa1.3□□□□□ -2.2
HMG20A-211ENST00000560867 OR5AC2Q9NZP5 309 aa1.3□□□□□ -2.2
HMG20A-211ENST00000560867 PTPRBP23467 1997 aa1.3□□□□□ -2.2
HMG20A-211ENST00000560867 RIC1Q4ADV7 1423 aa1.3□□□□□ -2.2
HMG20A-211ENST00000560867 A2MP01023 1474 aa1.3□□□□□ -2.2
HMG20A-211ENST00000560867 PLXND1Q9Y4D7 1925 aa1.29□□□□□ -2.2
HMG20A-211ENST00000560867 IGKV1D-42A0A075B6H8 117 aa1.29□□□□□ -2.2
HMG20A-211ENST00000560867 TRAV3A0A0B4J244 114 aa1.29□□□□□ -2.2
HMG20A-211ENST00000560867 CCDC160A6NGH7 325 aa1.29□□□□□ -2.2
HMG20A-211ENST00000560867 A8MWV9 139 aa1.29□□□□□ -2.2
HMG20A-211ENST00000560867 IBA57-AS1B1ANH7 110 aa1.29□□□□□ -2.2
HMG20A-211ENST00000560867 B4DSR2 109 aa1.29□□□□□ -2.2
HMG20A-211ENST00000560867 M0R2Z0 102 aa1.29□□□□□ -2.2
HMG20A-211ENST00000560867 TIMM17BO60830 172 aa1.29□□□□□ -2.2
HMG20A-211ENST00000560867 PMP2P02689 132 aa1.29□□□□□ -2.2
HMG20A-211ENST00000560867 PAEPP09466 180 aa1.29□□□□□ -2.2
HMG20A-211ENST00000560867 FOXA3P55318 350 aaPredicted RBP1.29□□□□□ -2.2
HMG20A-211ENST00000560867 MYL5Q02045 173 aa1.29□□□□□ -2.2
HMG20A-211ENST00000560867 ESRGQ1W209 222 aa1.29□□□□□ -2.2
HMG20A-211ENST00000560867 C4orf22Q6V702 233 aa1.29□□□□□ -2.2
HMG20A-211ENST00000560867 AAED1Q7RTV5 226 aa1.29□□□□□ -2.2
HMG20A-211ENST00000560867 OR5D16Q8NGK9 328 aa1.29□□□□□ -2.2
HMG20A-211ENST00000560867 OR4K15Q8NH41 348 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms