RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 PIGBOS1A0A0B4J2F0 54 aa11.26□□□□□ -0.61
CDC42BPB-205ENST00000559245 DUXBA0A1W2PPF3 345 aa11.26□□□□□ -0.61
CDC42BPB-205ENST00000559245 MED6O75586 246 aa11.26□□□□□ -0.61
CDC42BPB-205ENST00000559245 RPP30P78346 268 aaKnown RBP11.26□□□□□ -0.61
CDC42BPB-205ENST00000559245 AKR1C1Q04828 323 aa11.26□□□□□ -0.61
CDC42BPB-205ENST00000559245 ZNF493Q6ZR52 646 aa11.26□□□□□ -0.61
CDC42BPB-205ENST00000559245 OR10J6PQ8NGY7 276 aa11.26□□□□□ -0.61
CDC42BPB-205ENST00000559245 RNASE8Q8TDE3 154 aaKnown RBP11.26□□□□□ -0.61
CDC42BPB-205ENST00000559245 RXFP4Q8TDU9 374 aa11.26□□□□□ -0.61
CDC42BPB-205ENST00000559245 TMEM263Q8WUH6 116 aaKnown RBP11.26□□□□□ -0.61
CDC42BPB-205ENST00000559245 CIB3Q96Q77 187 aaPredicted RBP11.26□□□□□ -0.61
CDC42BPB-205ENST00000559245 A0A1W2PPQ1 181 aa11.25□□□□□ -0.61
CDC42BPB-205ENST00000559245 WRBO00258 174 aa11.25□□□□□ -0.61
CDC42BPB-205ENST00000559245 PRB4P10163 310 aaPredicted RBP11.25□□□□□ -0.61
CDC42BPB-205ENST00000559245 RPL7P18124 248 aaKnown RBP11.25□□□□□ -0.61
CDC42BPB-205ENST00000559245 CXCL3P19876 107 aa11.25□□□□□ -0.61
CDC42BPB-205ENST00000559245 M6PRP20645 277 aa11.25□□□□□ -0.61
CDC42BPB-205ENST00000559245 DLK1P80370 383 aa11.25□□□□□ -0.61
CDC42BPB-205ENST00000559245 PSG3Q16557 428 aa11.25□□□□□ -0.61
CDC42BPB-205ENST00000559245 ESRGQ1W209 222 aa11.25□□□□□ -0.61
CDC42BPB-205ENST00000559245 ZNF503Q96F45 646 aa11.25□□□□□ -0.61
CDC42BPB-205ENST00000559245 UPK3BQ9BT76 320 aa11.25□□□□□ -0.61
CDC42BPB-205ENST00000559245 SHANK2-AS3Q9BTD1 123 aa11.25□□□□□ -0.61
CDC42BPB-205ENST00000559245 A0A0J9YY99 117 aa11.24□□□□□ -0.61
CDC42BPB-205ENST00000559245 EPM2AB3EWF7 344 aa11.24□□□□□ -0.61
CDC42BPB-205ENST00000559245 SYNGR2O43760 224 aa11.24□□□□□ -0.61
CDC42BPB-205ENST00000559245 SLC25A6P12236 298 aa11.24□□□□□ -0.61
CDC42BPB-205ENST00000559245 CDKN1BP46527 198 aa11.24□□□□□ -0.61
CDC42BPB-205ENST00000559245 AP3S2P59780 193 aa11.24□□□□□ -0.61
CDC42BPB-205ENST00000559245 RAP2BP61225 183 aa11.24□□□□□ -0.61
CDC42BPB-205ENST00000559245 ASAH1Q13510 395 aa11.24□□□□□ -0.61
CDC42BPB-205ENST00000559245 ZNF586Q9NXT0 402 aa11.24□□□□□ -0.61
CDC42BPB-205ENST00000559245 HIGD1AQ9Y241 93 aa11.24□□□□□ -0.61
CDC42BPB-205ENST00000559245 PLA2G10O15496 165 aa11.23□□□□□ -0.61
CDC42BPB-205ENST00000559245 IL5P05113 134 aa11.23□□□□□ -0.61
CDC42BPB-205ENST00000559245 HOXA5P20719 270 aa11.23□□□□□ -0.61
CDC42BPB-205ENST00000559245 SPANXN5Q5MJ07 72 aa11.23□□□□□ -0.61
CDC42BPB-205ENST00000559245 TRIQKQ629K1 86 aa11.23□□□□□ -0.61
CDC42BPB-205ENST00000559245 CYP2G1PQ6ZSU1 146 aa11.23□□□□□ -0.61
CDC42BPB-205ENST00000559245 ACOT7LQ6ZUV0 252 aa11.23□□□□□ -0.61
CDC42BPB-205ENST00000559245 LINC00612Q8N6U2 182 aa11.23□□□□□ -0.61
CDC42BPB-205ENST00000559245 LRRC20Q8TCA0 184 aa11.23□□□□□ -0.61
CDC42BPB-205ENST00000559245 MRPS16Q9Y3D3 137 aaKnown RBP11.23□□□□□ -0.61
CDC42BPB-205ENST00000559245 A0A087X0K7 114 aa11.22□□□□□ -0.61
CDC42BPB-205ENST00000559245 H3BP45 60 aa11.22□□□□□ -0.61
CDC42BPB-205ENST00000559245 H7BYZ3 331 aa11.22□□□□□ -0.61
CDC42BPB-205ENST00000559245 ADAP1O75689 374 aa11.22□□□□□ -0.61
CDC42BPB-205ENST00000559245 BTCP35070 178 aa11.22□□□□□ -0.61
CDC42BPB-205ENST00000559245 TMEM128Q5BJH2 165 aa11.22□□□□□ -0.61
CDC42BPB-205ENST00000559245 TMED4Q7Z7H5 227 aa11.22□□□□□ -0.61
CDC42BPB-205ENST00000559245 TOMM5Q8N4H5 51 aa11.22□□□□□ -0.61
CDC42BPB-205ENST00000559245 LRTM2Q8N967 370 aa11.22□□□□□ -0.61
CDC42BPB-205ENST00000559245 RPUSD4Q96CM3 377 aaKnown RBP11.22□□□□□ -0.61
CDC42BPB-205ENST00000559245 GAGE12BA1L429 117 aa11.21□□□□□ -0.61
CDC42BPB-205ENST00000559245 SMCO3A2RU48 225 aa11.21□□□□□ -0.61
CDC42BPB-205ENST00000559245 NAP1L6A6NFF2 107 aa11.21□□□□□ -0.61
CDC42BPB-205ENST00000559245 HYPMO75409 117 aa11.21□□□□□ -0.61
CDC42BPB-205ENST00000559245 GAGE7O76087 117 aa11.21□□□□□ -0.61
CDC42BPB-205ENST00000559245 OR5G3P0C626 314 aa11.21□□□□□ -0.61
CDC42BPB-205ENST00000559245 GAGE12FP0CL80 117 aa11.21□□□□□ -0.61
CDC42BPB-205ENST00000559245 GAGE12GP0CL81 117 aa11.21□□□□□ -0.61
CDC42BPB-205ENST00000559245 GAGE12IP0CL82 117 aa11.21□□□□□ -0.61
CDC42BPB-205ENST00000559245 VAMP1P23763 118 aa11.21□□□□□ -0.61
CDC42BPB-205ENST00000559245 KIR3DS1Q14943 382 aa11.21□□□□□ -0.61
CDC42BPB-205ENST00000559245 C20orf144Q9BQM9 153 aa11.21□□□□□ -0.61
CDC42BPB-205ENST00000559245 STRAPQ9Y3F4 350 aaKnown RBP11.21□□□□□ -0.61
CDC42BPB-205ENST00000559245 H3BNG1 76 aa11.2□□□□□ -0.62
CDC42BPB-205ENST00000559245 LINC00869P0C866 280 aa11.2□□□□□ -0.62
CDC42BPB-205ENST00000559245 INAFM2P0DMQ5 153 aa11.2□□□□□ -0.62
CDC42BPB-205ENST00000559245 LINC00315P59091 139 aa11.2□□□□□ -0.62
CDC42BPB-205ENST00000559245 PLP1P60201 277 aa11.2□□□□□ -0.62
CDC42BPB-205ENST00000559245 CCDC28AQ8IWP9 274 aa11.2□□□□□ -0.62
CDC42BPB-205ENST00000559245 LYRM1O43325 122 aa11.19□□□□□ -0.62
CDC42BPB-205ENST00000559245 RLN2P04090 185 aa11.19□□□□□ -0.62
CDC42BPB-205ENST00000559245 FAUP35544 74 aaKnown RBP11.19□□□□□ -0.62
CDC42BPB-205ENST00000559245 PARD6GQ9BYG4 376 aaPredicted RBP11.19□□□□□ -0.62
CDC42BPB-205ENST00000559245 VPS13BQ7Z7G8 4022 aa11.19□□□□□ -0.62
CDC42BPB-205ENST00000559245 PMS2P5A8MQ11 134 aa11.18□□□□□ -0.62
CDC42BPB-205ENST00000559245 SNURFLB1AK76 121 aa11.18□□□□□ -0.62
CDC42BPB-205ENST00000559245 MRPS12O15235 138 aaKnown RBP11.18□□□□□ -0.62
CDC42BPB-205ENST00000559245 PTTG1O95997 202 aa11.18□□□□□ -0.62
CDC42BPB-205ENST00000559245 HOXB5P09067 269 aa11.18□□□□□ -0.62
CDC42BPB-205ENST00000559245 ANXA7P20073 488 aaKnown RBP11.18□□□□□ -0.62
CDC42BPB-205ENST00000559245 DEFA1P59665 94 aa11.18□□□□□ -0.62
CDC42BPB-205ENST00000559245 DEFA3P59666 94 aa11.18□□□□□ -0.62
CDC42BPB-205ENST00000559245 SELENOTP62341 195 aa11.18□□□□□ -0.62
CDC42BPB-205ENST00000559245 GFI1BQ5VTD9 330 aa11.18□□□□□ -0.62
CDC42BPB-205ENST00000559245 Q6ZRN7 208 aaPredicted RBP11.18□□□□□ -0.62
CDC42BPB-205ENST00000559245 S100A7AQ86SG5 101 aa11.18□□□□□ -0.62
CDC42BPB-205ENST00000559245 LYPD1Q8N2G4 141 aa11.18□□□□□ -0.62
CDC42BPB-205ENST00000559245 ARL6Q9H0F7 186 aa11.18□□□□□ -0.62
CDC42BPB-205ENST00000559245 ZNF331Q9NQX6 463 aaPredicted RBP11.18□□□□□ -0.62
CDC42BPB-205ENST00000559245 FAT1Q14517 4588 aa11.18□□□□□ -0.62
CDC42BPB-205ENST00000559245 FUSP35637 526 aaKnown RBP eCLIP11.17□□□□□ -0.62
CDC42BPB-205ENST00000559245 LCN15Q6UWW0 184 aa11.17□□□□□ -0.62
CDC42BPB-205ENST00000559245 PATE2Q6UY27 113 aa11.17□□□□□ -0.62
CDC42BPB-205ENST00000559245 TMPRSS5Q9H3S3 457 aa11.17□□□□□ -0.62
CDC42BPB-205ENST00000559245 PGPEP1Q9NXJ5 209 aa11.17□□□□□ -0.62
CDC42BPB-205ENST00000559245 CENPXA8MT69 81 aa11.16□□□□□ -0.62
CDC42BPB-205ENST00000559245 SFT2D2O95562 160 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms