RNA–Protein interactions for RNA: ENST00000559179.1

TRPM1-210, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 1 (best) BASIC

Gene TRPM1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-210ENST00000559179 LINC00869P0C866 280 aa8.59□□□□□ -1.03
TRPM1-210ENST00000559179 TMEM128Q5BJH2 165 aa8.59□□□□□ -1.03
TRPM1-210ENST00000559179 ACOT7LQ6ZUV0 252 aa8.59□□□□□ -1.03
TRPM1-210ENST00000559179 RXFP4Q8TDU9 374 aa8.59□□□□□ -1.03
TRPM1-210ENST00000559179 TMEM263Q8WUH6 116 aaKnown RBP8.59□□□□□ -1.03
TRPM1-210ENST00000559179 RPUSD4Q96CM3 377 aaKnown RBP8.59□□□□□ -1.03
TRPM1-210ENST00000559179 C17orf77Q96MU5 243 aa8.59□□□□□ -1.03
TRPM1-210ENST00000559179 SHANK2-AS3Q9BTD1 123 aa8.59□□□□□ -1.03
TRPM1-210ENST00000559179 ARL6Q9H0F7 186 aa8.59□□□□□ -1.03
TRPM1-210ENST00000559179 ZNF586Q9NXT0 402 aa8.59□□□□□ -1.03
TRPM1-210ENST00000559179 RNF24Q9Y225 148 aa8.59□□□□□ -1.03
TRPM1-210ENST00000559179 SLC25A6P12236 298 aa8.58□□□□□ -1.04
TRPM1-210ENST00000559179 CXCL3P19876 107 aa8.58□□□□□ -1.04
TRPM1-210ENST00000559179 RRAS2P62070 204 aaPredicted RBP8.58□□□□□ -1.04
TRPM1-210ENST00000559179 SPCS2Q15005 226 aa8.58□□□□□ -1.04
TRPM1-210ENST00000559179 PSENENQ9NZ42 101 aa8.58□□□□□ -1.04
TRPM1-210ENST00000559179 ZNF701M0R085 212 aaPredicted RBP8.57□□□□□ -1.04
TRPM1-210ENST00000559179 SNRPCP09234 159 aaKnown RBP8.57□□□□□ -1.04
TRPM1-210ENST00000559179 AP3S2P59780 193 aa8.57□□□□□ -1.04
TRPM1-210ENST00000559179 KRTAP10-2P60368 255 aa8.57□□□□□ -1.04
TRPM1-210ENST00000559179 ESRGQ1W209 222 aa8.57□□□□□ -1.04
TRPM1-210ENST00000559179 TOMM5Q8N4H5 51 aa8.57□□□□□ -1.04
TRPM1-210ENST00000559179 MCFD2Q8NI22 146 aa8.57□□□□□ -1.04
TRPM1-210ENST00000559179 Q9H3A6 140 aa8.57□□□□□ -1.04
TRPM1-210ENST00000559179 A0A1W2PPQ1 181 aa8.56□□□□□ -1.04
TRPM1-210ENST00000559179 PMS2P5A8MQ11 134 aa8.56□□□□□ -1.04
TRPM1-210ENST00000559179 NOL3O60936 208 aaKnown RBP8.56□□□□□ -1.04
TRPM1-210ENST00000559179 SFT2D2O95562 160 aa8.56□□□□□ -1.04
TRPM1-210ENST00000559179 SELENOTP62341 195 aa8.56□□□□□ -1.04
TRPM1-210ENST00000559179 PYDC2Q56P42 97 aa8.56□□□□□ -1.04
TRPM1-210ENST00000559179 RNASE8Q8TDE3 154 aaKnown RBP8.56□□□□□ -1.04
TRPM1-210ENST00000559179 ZNF503Q96F45 646 aa8.56□□□□□ -1.04
TRPM1-210ENST00000559179 C20orf144Q9BQM9 153 aa8.56□□□□□ -1.04
TRPM1-210ENST00000559179 PARD6GQ9BYG4 376 aaPredicted RBP8.56□□□□□ -1.04
TRPM1-210ENST00000559179 MGAT4CQ9UBM8 478 aa8.56□□□□□ -1.04
TRPM1-210ENST00000559179 TRGV2A0A075B6R0 118 aa8.55□□□□□ -1.04
TRPM1-210ENST00000559179 A0A087X0K7 114 aa8.55□□□□□ -1.04
TRPM1-210ENST00000559179 PRSS46E5RG02 174 aa8.55□□□□□ -1.04
TRPM1-210ENST00000559179 GOSR2O14653 212 aa8.55□□□□□ -1.04
TRPM1-210ENST00000559179 SSSCA1O60232 199 aa8.55□□□□□ -1.04
TRPM1-210ENST00000559179 INAFM2P0DMQ5 153 aa8.55□□□□□ -1.04
TRPM1-210ENST00000559179 BTF3P20290 206 aaKnown RBP8.55□□□□□ -1.04
TRPM1-210ENST00000559179 POLR2GP62487 172 aaKnown RBP eCLIP8.55□□□□□ -1.04
TRPM1-210ENST00000559179 PPP1R1AQ13522 171 aa8.55□□□□□ -1.04
TRPM1-210ENST00000559179 LCN15Q6UWW0 184 aa8.55□□□□□ -1.04
TRPM1-210ENST00000559179 LRTM2Q8N967 370 aa8.55□□□□□ -1.04
TRPM1-210ENST00000559179 SLC50A1Q9BRV3 221 aa8.55□□□□□ -1.04
TRPM1-210ENST00000559179 KRTAP1-5Q9BYS1 174 aa8.55□□□□□ -1.04
TRPM1-210ENST00000559179 ARV1Q9H2C2 271 aa8.55□□□□□ -1.04
TRPM1-210ENST00000559179 NPVFQ9HCQ7 196 aa8.55□□□□□ -1.04
TRPM1-210ENST00000559179 CCDC59Q9P031 241 aaKnown RBP8.55□□□□□ -1.04
TRPM1-210ENST00000559179 MRPS16Q9Y3D3 137 aaKnown RBP8.55□□□□□ -1.04
TRPM1-210ENST00000559179 TRAV12-3A0A0B4J271 114 aa8.54□□□□□ -1.04
TRPM1-210ENST00000559179 H3BTX0 84 aa8.54□□□□□ -1.04
TRPM1-210ENST00000559179 SCGB1D2O95969 90 aa8.54□□□□□ -1.04
TRPM1-210ENST00000559179 SMIM18P0DKX4 95 aa8.54□□□□□ -1.04
TRPM1-210ENST00000559179 HOXA5P20719 270 aa8.54□□□□□ -1.04
TRPM1-210ENST00000559179 TNFSF8P32971 234 aa8.54□□□□□ -1.04
TRPM1-210ENST00000559179 LINC00305Q7Z4B0 112 aa8.54□□□□□ -1.04
TRPM1-210ENST00000559179 OR10P1Q8NGE3 313 aa8.54□□□□□ -1.04
TRPM1-210ENST00000559179 SLC25A21Q9BQT8 299 aaPredicted RBP8.54□□□□□ -1.04
TRPM1-210ENST00000559179 UPK3BQ9BT76 320 aa8.54□□□□□ -1.04
TRPM1-210ENST00000559179 MRPS26Q9BYN8 205 aaKnown RBP8.54□□□□□ -1.04
TRPM1-210ENST00000559179 COX7A2P2O60397 106 aa8.53□□□□□ -1.04
TRPM1-210ENST00000559179 IFNA5P01569 189 aa8.53□□□□□ -1.04
TRPM1-210ENST00000559179 METTL15P1P0C7V9 234 aa8.53□□□□□ -1.04
TRPM1-210ENST00000559179 LEPP41159 167 aa8.53□□□□□ -1.04
TRPM1-210ENST00000559179 LINC00315P59091 139 aa8.53□□□□□ -1.04
TRPM1-210ENST00000559179 PLP1P60201 277 aa8.53□□□□□ -1.04
TRPM1-210ENST00000559179 ERVFC1-1P60608 527 aa8.53□□□□□ -1.04
TRPM1-210ENST00000559179 SLC38A11Q08AI6 406 aa8.53□□□□□ -1.04
TRPM1-210ENST00000559179 KIR3DS1Q14943 382 aa8.53□□□□□ -1.04
TRPM1-210ENST00000559179 GFI1BQ5VTD9 330 aa8.53□□□□□ -1.04
TRPM1-210ENST00000559179 TEPPQ6URK8 271 aa8.53□□□□□ -1.04
TRPM1-210ENST00000559179 BPIFA4PQ86YQ2 179 aa8.53□□□□□ -1.04
TRPM1-210ENST00000559179 TMPRSS5Q9H3S3 457 aa8.53□□□□□ -1.04
TRPM1-210ENST00000559179 PGPEP1Q9NXJ5 209 aa8.53□□□□□ -1.04
TRPM1-210ENST00000559179 HSPG2P98160 4391 aa8.52□□□□□ -1.04
TRPM1-210ENST00000559179 H3BNG1 76 aa8.52□□□□□ -1.05
TRPM1-210ENST00000559179 CXCL2P19875 107 aa8.52□□□□□ -1.05
TRPM1-210ENST00000559179 FUSP35637 526 aaKnown RBP eCLIP8.52□□□□□ -1.05
TRPM1-210ENST00000559179 INPP1P49441 399 aa8.52□□□□□ -1.05
TRPM1-210ENST00000559179 ZBTB8BQ8NAP8 495 aaPredicted RBP8.52□□□□□ -1.05
TRPM1-210ENST00000559179 DYNC2LI1Q8TCX1 351 aa8.52□□□□□ -1.05
TRPM1-210ENST00000559179 RAB2BQ8WUD1 216 aa8.52□□□□□ -1.05
TRPM1-210ENST00000559179 FRZBQ92765 325 aa8.52□□□□□ -1.05
TRPM1-210ENST00000559179 ZNF331Q9NQX6 463 aaPredicted RBP8.52□□□□□ -1.05
TRPM1-210ENST00000559179 SIVA1O15304 175 aa8.51□□□□□ -1.05
TRPM1-210ENST00000559179 CCNKO75909 580 aa8.51□□□□□ -1.05
TRPM1-210ENST00000559179 PXDC1Q5TGL8 231 aa8.51□□□□□ -1.05
TRPM1-210ENST00000559179 C10orf113Q5VZT2 155 aa8.51□□□□□ -1.05
TRPM1-210ENST00000559179 PATE2Q6UY27 113 aa8.51□□□□□ -1.05
TRPM1-210ENST00000559179 Q6ZTI0 123 aa8.51□□□□□ -1.05
TRPM1-210ENST00000559179 ZNF546Q86UE3 836 aa8.51□□□□□ -1.05
TRPM1-210ENST00000559179 SMIM8Q96KF7 97 aa8.51□□□□□ -1.05
TRPM1-210ENST00000559179 PYGO2Q9BRQ0 406 aa8.51□□□□□ -1.05
TRPM1-210ENST00000559179 PXMP4Q9Y6I8 212 aa8.51□□□□□ -1.05
TRPM1-210ENST00000559179 A0A096LPF7 62 aa8.5□□□□□ -1.05
TRPM1-210ENST00000559179 TRGV1A0A0A0MS02 117 aa8.5□□□□□ -1.05
TRPM1-210ENST00000559179 PRAC2D3DTV9 90 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms