RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 C7orf66A4D0T2 115 aa9.53□□□□□ -0.88
VPS18-203ENST00000558855 PRAC2D3DTV9 90 aa9.53□□□□□ -0.88
VPS18-203ENST00000558855 BOLA2-SMG1P6H3BVE0 249 aa9.53□□□□□ -0.88
VPS18-203ENST00000558855 K7EPK0 472 aa9.53□□□□□ -0.88
VPS18-203ENST00000558855 ZNF701M0R085 212 aaPredicted RBP9.53□□□□□ -0.88
VPS18-203ENST00000558855 INSP01308 110 aa9.53□□□□□ -0.88
VPS18-203ENST00000558855 RAP2BP61225 183 aa9.53□□□□□ -0.88
VPS18-203ENST00000558855 LGALS9BQ3B8N2 356 aa9.53□□□□□ -0.88
VPS18-203ENST00000558855 MITD1Q8WV92 249 aa9.53□□□□□ -0.88
VPS18-203ENST00000558855 MGST2Q99735 147 aa9.53□□□□□ -0.88
VPS18-203ENST00000558855 TMEM208Q9BTX3 173 aa9.53□□□□□ -0.88
VPS18-203ENST00000558855 ARV1Q9H2C2 271 aa9.53□□□□□ -0.88
VPS18-203ENST00000558855 AGPAT2O15120 278 aa9.52□□□□□ -0.89
VPS18-203ENST00000558855 DUSP14O95147 198 aaKnown RBP9.52□□□□□ -0.89
VPS18-203ENST00000558855 INPP1P49441 399 aa9.52□□□□□ -0.89
VPS18-203ENST00000558855 PSG3Q16557 428 aa9.52□□□□□ -0.89
VPS18-203ENST00000558855 SAMD13Q5VXD3 122 aa9.52□□□□□ -0.89
VPS18-203ENST00000558855 UBE2DNLQ8IWF7 75 aa9.52□□□□□ -0.89
VPS18-203ENST00000558855 TMEM37Q8WXS4 190 aa9.52□□□□□ -0.89
VPS18-203ENST00000558855 SEC22CQ9BRL7 303 aa9.52□□□□□ -0.89
VPS18-203ENST00000558855 C20orf85Q9H1P6 137 aa9.52□□□□□ -0.89
VPS18-203ENST00000558855 NPVFQ9HCQ7 196 aa9.52□□□□□ -0.89
VPS18-203ENST00000558855 GSKIPQ9P0R6 139 aa9.52□□□□□ -0.89
VPS18-203ENST00000558855 TEX48A0A1B0GUV7 120 aa9.51□□□□□ -0.89
VPS18-203ENST00000558855 TSC22D2O75157 780 aa9.51□□□□□ -0.89
VPS18-203ENST00000558855 IFNA21P01568 189 aa9.51□□□□□ -0.89
VPS18-203ENST00000558855 DEFB130BP0DP73 79 aa9.51□□□□□ -0.89
VPS18-203ENST00000558855 DEFB130AP0DP74 79 aa9.51□□□□□ -0.89
VPS18-203ENST00000558855 RPL7P18124 248 aaKnown RBP9.51□□□□□ -0.89
VPS18-203ENST00000558855 SELENOTP62341 195 aa9.51□□□□□ -0.89
VPS18-203ENST00000558855 FAM210BQ96KR6 192 aa9.51□□□□□ -0.89
VPS18-203ENST00000558855 ZNF331Q9NQX6 463 aaPredicted RBP9.51□□□□□ -0.89
VPS18-203ENST00000558855 TRAV5A0A0B4J249 113 aa9.5□□□□□ -0.89
VPS18-203ENST00000558855 FNDC10F2Z333 226 aa9.5□□□□□ -0.89
VPS18-203ENST00000558855 H3BQ15 152 aa9.5□□□□□ -0.89
VPS18-203ENST00000558855 TAS2R30P59541 319 aa9.5□□□□□ -0.89
VPS18-203ENST00000558855 RHOBP62745 196 aa9.5□□□□□ -0.89
VPS18-203ENST00000558855 OPCMLQ14982 345 aa9.5□□□□□ -0.89
VPS18-203ENST00000558855 TEPPQ6URK8 271 aa9.5□□□□□ -0.89
VPS18-203ENST00000558855 LINC00305Q7Z4B0 112 aa9.5□□□□□ -0.89
VPS18-203ENST00000558855 ZNF575Q86XF7 245 aa9.5□□□□□ -0.89
VPS18-203ENST00000558855 OR10P1Q8NGE3 313 aa9.5□□□□□ -0.89
VPS18-203ENST00000558855 RPUSD4Q96CM3 377 aaKnown RBP9.5□□□□□ -0.89
VPS18-203ENST00000558855 MUC4Q99102 2169 aa9.49□□□□□ -0.89
VPS18-203ENST00000558855 TRAV6A0A075B6T7 132 aa9.49□□□□□ -0.89
VPS18-203ENST00000558855 FAM24AA6NFZ4 105 aa9.49□□□□□ -0.89
VPS18-203ENST00000558855 IGLC2P0DOY2 106 aa9.49□□□□□ -0.89
VPS18-203ENST00000558855 TSPOP30536 169 aa9.49□□□□□ -0.89
VPS18-203ENST00000558855 MGAT4CQ9UBM8 478 aa9.49□□□□□ -0.89
VPS18-203ENST00000558855 LSM5Q9Y4Y9 91 aaKnown RBP9.49□□□□□ -0.89
VPS18-203ENST00000558855 IGSF23A1L1A6 192 aa9.48□□□□□ -0.89
VPS18-203ENST00000558855 LYRM9A8MSI8 78 aa9.48□□□□□ -0.89
VPS18-203ENST00000558855 LYRM1O43325 122 aa9.48□□□□□ -0.89
VPS18-203ENST00000558855 CST7O76096 145 aa9.48□□□□□ -0.89
VPS18-203ENST00000558855 TCRBP04435 133 aa9.48□□□□□ -0.89
VPS18-203ENST00000558855 RNF212Q495C1 297 aa9.48□□□□□ -0.89
VPS18-203ENST00000558855 MIC13Q5XKP0 118 aa9.48□□□□□ -0.89
VPS18-203ENST00000558855 ZNF546Q86UE3 836 aa9.48□□□□□ -0.89
VPS18-203ENST00000558855 RNASE8Q8TDE3 154 aaKnown RBP9.48□□□□□ -0.89
VPS18-203ENST00000558855 SAT2Q96F10 170 aaPredicted RBP9.48□□□□□ -0.89
VPS18-203ENST00000558855 LINC01587Q99440 93 aa9.48□□□□□ -0.89
VPS18-203ENST00000558855 KRTAP4-5Q9BYR2 181 aa9.48□□□□□ -0.89
VPS18-203ENST00000558855 F5H768 121 aa9.47□□□□□ -0.89
VPS18-203ENST00000558855 GOSR2O14653 212 aa9.47□□□□□ -0.89
VPS18-203ENST00000558855 HTN1P15515 57 aa9.47□□□□□ -0.89
VPS18-203ENST00000558855 IL15RAQ13261 267 aa9.47□□□□□ -0.89
VPS18-203ENST00000558855 GFI1BQ5VTD9 330 aa9.47□□□□□ -0.89
VPS18-203ENST00000558855 ZNRF2Q8NHG8 242 aa9.47□□□□□ -0.89
VPS18-203ENST00000558855 RNF141Q8WVD5 230 aa9.47□□□□□ -0.89
VPS18-203ENST00000558855 NUDT15Q9NV35 164 aa9.47□□□□□ -0.89
VPS18-203ENST00000558855 FAM25EA8MYX2 175 aa9.46□□□□□ -0.9
VPS18-203ENST00000558855 J3KRW8 73 aa9.46□□□□□ -0.9
VPS18-203ENST00000558855 COX7A2P2O60397 106 aa9.46□□□□□ -0.9
VPS18-203ENST00000558855 TNP2Q05952 138 aa9.46□□□□□ -0.9
VPS18-203ENST00000558855 LCN15Q6UWW0 184 aa9.46□□□□□ -0.9
VPS18-203ENST00000558855 NRARPQ7Z6K4 114 aa9.46□□□□□ -0.9
VPS18-203ENST00000558855 NOP10Q9NPE3 64 aaKnown RBP9.46□□□□□ -0.9
VPS18-203ENST00000558855 ZNF586Q9NXT0 402 aa9.46□□□□□ -0.9
VPS18-203ENST00000558855 WDR83OSQ9Y284 106 aa9.46□□□□□ -0.9
VPS18-203ENST00000558855 CENPXA8MT69 81 aa9.45□□□□□ -0.9
VPS18-203ENST00000558855 NUDT3O95989 172 aa9.45□□□□□ -0.9
VPS18-203ENST00000558855 CT45A10P0DMU9 189 aa9.45□□□□□ -0.9
VPS18-203ENST00000558855 CXCL2P19875 107 aa9.45□□□□□ -0.9
VPS18-203ENST00000558855 HOXA5P20719 270 aa9.45□□□□□ -0.9
VPS18-203ENST00000558855 CDKN1BP46527 198 aa9.45□□□□□ -0.9
VPS18-203ENST00000558855 CAMLGP49069 296 aa9.45□□□□□ -0.9
VPS18-203ENST00000558855 TAS2R60P59551 318 aa9.45□□□□□ -0.9
VPS18-203ENST00000558855 VWC2Q2TAL6 325 aa9.45□□□□□ -0.9
VPS18-203ENST00000558855 C10orf113Q5VZT2 155 aa9.45□□□□□ -0.9
VPS18-203ENST00000558855 C15orf53Q8NAA6 179 aa9.45□□□□□ -0.9
VPS18-203ENST00000558855 LRRC20Q8TCA0 184 aa9.45□□□□□ -0.9
VPS18-203ENST00000558855 ZNF431Q8TF32 576 aaPredicted RBP9.45□□□□□ -0.9
VPS18-203ENST00000558855 GGACTQ9BVM4 153 aa9.45□□□□□ -0.9
VPS18-203ENST00000558855 KRTAP1-5Q9BYS1 174 aa9.45□□□□□ -0.9
VPS18-203ENST00000558855 LINC00588Q9Y4M8 146 aa9.45□□□□□ -0.9
VPS18-203ENST00000558855 UBE2L5PA0A1B0GUS4 154 aa9.44□□□□□ -0.9
VPS18-203ENST00000558855 M0R3E3 92 aa9.44□□□□□ -0.9
VPS18-203ENST00000558855 ATP5G1P05496 136 aa9.44□□□□□ -0.9
VPS18-203ENST00000558855 ATP5G3P48201 142 aa9.44□□□□□ -0.9
VPS18-203ENST00000558855 BCAP31P51572 246 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms