RNA–Protein interactions for RNA: ENST00000558771.1

LRRC28-208, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-208ENST00000558771 SAMD13Q5VXD3 122 aa3.68□□□□□ -1.82
LRRC28-208ENST00000558771 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.68□□□□□ -1.82
LRRC28-208ENST00000558771 ZNF493Q6ZR52 646 aa3.68□□□□□ -1.82
LRRC28-208ENST00000558771 TMEM144Q7Z5S9 345 aa3.68□□□□□ -1.82
LRRC28-208ENST00000558771 NFE4Q86UQ8 179 aa3.68□□□□□ -1.82
LRRC28-208ENST00000558771 TMEM256Q8N2U0 113 aa3.68□□□□□ -1.82
LRRC28-208ENST00000558771 RNASE11Q8TAA1 199 aaKnown RBP3.68□□□□□ -1.82
LRRC28-208ENST00000558771 GPX8Q8TED1 209 aa3.68□□□□□ -1.82
LRRC28-208ENST00000558771 TMEM263Q8WUH6 116 aaKnown RBP3.68□□□□□ -1.82
LRRC28-208ENST00000558771 ZNF486Q96H40 463 aaPredicted RBP3.68□□□□□ -1.82
LRRC28-208ENST00000558771 RSG1Q9BU20 258 aa3.68□□□□□ -1.82
LRRC28-208ENST00000558771 TMEM70Q9BUB7 260 aa3.68□□□□□ -1.82
LRRC28-208ENST00000558771 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.68□□□□□ -1.82
LRRC28-208ENST00000558771 TRAV8-2A0A0B4J237 113 aa3.67□□□□□ -1.82
LRRC28-208ENST00000558771 LOC100506127A0A0U1RQW1 187 aa3.67□□□□□ -1.82
LRRC28-208ENST00000558771 ADAP1O75689 374 aa3.67□□□□□ -1.82
LRRC28-208ENST00000558771 NXPH4O95158 308 aa3.67□□□□□ -1.82
LRRC28-208ENST00000558771 ZNF182P17025 639 aaPredicted RBP3.67□□□□□ -1.82
LRRC28-208ENST00000558771 RHOBP62745 196 aa3.67□□□□□ -1.82
LRRC28-208ENST00000558771 HIST1H1AQ02539 215 aaPredicted RBP3.67□□□□□ -1.82
LRRC28-208ENST00000558771 OR2F1Q13607 317 aa3.67□□□□□ -1.82
LRRC28-208ENST00000558771 GAMTQ14353 236 aa3.67□□□□□ -1.82
LRRC28-208ENST00000558771 UBE2NLQ5JXB2 153 aa3.67□□□□□ -1.82
LRRC28-208ENST00000558771 TMED4Q7Z7H5 227 aa3.67□□□□□ -1.82
LRRC28-208ENST00000558771 NOXA1Q86UR1 476 aa3.67□□□□□ -1.82
LRRC28-208ENST00000558771 LHFPL1Q86WI0 220 aa3.67□□□□□ -1.82
LRRC28-208ENST00000558771 FAM219AQ8IW50 185 aa3.67□□□□□ -1.82
LRRC28-208ENST00000558771 ARRDC1Q8N5I2 433 aa3.67□□□□□ -1.82
LRRC28-208ENST00000558771 RNF182Q8N6D2 247 aa3.67□□□□□ -1.82
LRRC28-208ENST00000558771 LHFPL5Q8TAF8 219 aa3.67□□□□□ -1.82
LRRC28-208ENST00000558771 DEFB104AQ8WTQ1 72 aa3.67□□□□□ -1.82
LRRC28-208ENST00000558771 VSIG2Q96IQ7 327 aa3.67□□□□□ -1.82
LRRC28-208ENST00000558771 CNBD2Q96M20 576 aa3.67□□□□□ -1.82
LRRC28-208ENST00000558771 SLC25A22Q9H936 323 aa3.67□□□□□ -1.82
LRRC28-208ENST00000558771 CACNG5Q9UF02 275 aa3.67□□□□□ -1.82
LRRC28-208ENST00000558771 BLOC1S6Q9UL45 172 aa3.67□□□□□ -1.82
LRRC28-208ENST00000558771 IGLV5-52A0A0A0MRZ9 124 aa3.66□□□□□ -1.82
LRRC28-208ENST00000558771 ZNF98A6NK75 572 aa3.66□□□□□ -1.82
LRRC28-208ENST00000558771 SNRPGP15A8MWD9 76 aa3.66□□□□□ -1.82
LRRC28-208ENST00000558771 H7BYZ3 331 aa3.66□□□□□ -1.82
LRRC28-208ENST00000558771 CDS2O95674 445 aa3.66□□□□□ -1.82
LRRC28-208ENST00000558771 RLN2P04090 185 aa3.66□□□□□ -1.82
LRRC28-208ENST00000558771 OR5AC1P0C628 307 aa3.66□□□□□ -1.82
LRRC28-208ENST00000558771 PRB4P10163 310 aaPredicted RBP3.66□□□□□ -1.82
LRRC28-208ENST00000558771 TGFBR1P36897 503 aa3.66□□□□□ -1.82
LRRC28-208ENST00000558771 FGL1Q08830 312 aa3.66□□□□□ -1.82
LRRC28-208ENST00000558771 MEF2DQ14814 521 aa3.66□□□□□ -1.82
LRRC28-208ENST00000558771 ANXA2RQ3ZCQ2 193 aa3.66□□□□□ -1.82
LRRC28-208ENST00000558771 SAMD12Q8N8I0 201 aa3.66□□□□□ -1.82
LRRC28-208ENST00000558771 CCDC71LQ8N9Z2 235 aa3.66□□□□□ -1.82
LRRC28-208ENST00000558771 ZNF738Q8NE65 137 aa3.66□□□□□ -1.82
LRRC28-208ENST00000558771 OR1B1Q8NGR6 318 aa3.66□□□□□ -1.82
LRRC28-208ENST00000558771 SLC35E1Q96K37 410 aa3.66□□□□□ -1.82
LRRC28-208ENST00000558771 PPP1R14DQ9NXH3 145 aa3.66□□□□□ -1.82
LRRC28-208ENST00000558771 COPZ2Q9P299 210 aa3.66□□□□□ -1.82
LRRC28-208ENST00000558771 IGKV1OR2-108A0A075B7D4 117 aa3.65□□□□□ -1.83
LRRC28-208ENST00000558771 IGLV5-39A0A0G2JS06 123 aa3.65□□□□□ -1.83
LRRC28-208ENST00000558771 PRSS47A8MTI9 375 aa3.65□□□□□ -1.83
LRRC28-208ENST00000558771 SNURFLB1AK76 121 aa3.65□□□□□ -1.83
LRRC28-208ENST00000558771 GABARAPH6UMI1 98 aa3.65□□□□□ -1.83
LRRC28-208ENST00000558771 GABARAPO95166 117 aa3.65□□□□□ -1.83
LRRC28-208ENST00000558771 FABP1P07148 127 aa3.65□□□□□ -1.83
LRRC28-208ENST00000558771 GPX4P36969 197 aaPredicted RBP3.65□□□□□ -1.83
LRRC28-208ENST00000558771 CDKN1BP46527 198 aa3.65□□□□□ -1.83
LRRC28-208ENST00000558771 GABARAPL2P60520 117 aa3.65□□□□□ -1.83
LRRC28-208ENST00000558771 Q6ZTI0 123 aa3.65□□□□□ -1.83
LRRC28-208ENST00000558771 SNX29P2Q8IUI4 249 aa3.65□□□□□ -1.83
LRRC28-208ENST00000558771 SELENOHQ8IZQ5 122 aaKnown RBP3.65□□□□□ -1.83
LRRC28-208ENST00000558771 LGI3Q8N145 548 aa3.65□□□□□ -1.83
LRRC28-208ENST00000558771 OR8A1Q8NGG7 326 aa3.65□□□□□ -1.83
LRRC28-208ENST00000558771 OR4D5Q8NGN0 318 aa3.65□□□□□ -1.83
LRRC28-208ENST00000558771 OR13C8Q8NGS7 320 aa3.65□□□□□ -1.83
LRRC28-208ENST00000558771 ZFAND1Q8TCF1 268 aa3.65□□□□□ -1.83
LRRC28-208ENST00000558771 GLYATL2Q8WU03 294 aa3.65□□□□□ -1.83
LRRC28-208ENST00000558771 RBPMSQ93062 196 aaKnown RBP3.65□□□□□ -1.83
LRRC28-208ENST00000558771 TRGV9Q99603 122 aa3.65□□□□□ -1.83
LRRC28-208ENST00000558771 PARD6GQ9BYG4 376 aaPredicted RBP3.65□□□□□ -1.83
LRRC28-208ENST00000558771 TMEM222Q9H0R3 208 aa3.65□□□□□ -1.83
LRRC28-208ENST00000558771 MSRB1Q9NZV6 116 aa3.65□□□□□ -1.83
LRRC28-208ENST00000558771 U3KQ87 197 aa3.65□□□□□ -1.83
LRRC28-208ENST00000558771 LRP2P98164 4655 aa3.65□□□□□ -1.83
LRRC28-208ENST00000558771 TRAV9-2A0A087WT02 112 aa3.64□□□□□ -1.83
LRRC28-208ENST00000558771 TEX13DA0A0J9YY54 714 aaPredicted RBP3.64□□□□□ -1.83
LRRC28-208ENST00000558771 LRCOL1A6NCL2 159 aa3.64□□□□□ -1.83
LRRC28-208ENST00000558771 B3GALNT1O75752 331 aa3.64□□□□□ -1.83
LRRC28-208ENST00000558771 OXTP01178 125 aa3.64□□□□□ -1.83
LRRC28-208ENST00000558771 CD3DP04234 171 aa3.64□□□□□ -1.83
LRRC28-208ENST00000558771 SULT1A3P0DMM9 295 aa3.64□□□□□ -1.83
LRRC28-208ENST00000558771 SULT1A4P0DMN0 295 aa3.64□□□□□ -1.83
LRRC28-208ENST00000558771 ORM2P19652 201 aa3.64□□□□□ -1.83
LRRC28-208ENST00000558771 CXCL3P19876 107 aa3.64□□□□□ -1.83
LRRC28-208ENST00000558771 GATA2P23769 480 aaPredicted RBP3.64□□□□□ -1.83
LRRC28-208ENST00000558771 PSG3Q16557 428 aa3.64□□□□□ -1.83
LRRC28-208ENST00000558771 RNASE10Q5GAN6 216 aaKnown RBP3.64□□□□□ -1.83
LRRC28-208ENST00000558771 GFI1BQ5VTD9 330 aa3.64□□□□□ -1.83
LRRC28-208ENST00000558771 TMEM268Q5VZI3 342 aa3.64□□□□□ -1.83
LRRC28-208ENST00000558771 LYPD5Q6UWN5 251 aa3.64□□□□□ -1.83
LRRC28-208ENST00000558771 TMEM182Q6ZP80 229 aaPredicted RBP3.64□□□□□ -1.83
LRRC28-208ENST00000558771 CROCCP3Q8IVE0 287 aa3.64□□□□□ -1.83
LRRC28-208ENST00000558771 THAP8Q8NA92 274 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms