RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 Q86TA4 180 aa12.35□□□□□ -0.43
AP4E1-202ENST00000558439 LINC00311Q8N616 119 aa12.35□□□□□ -0.43
AP4E1-202ENST00000558439 C20orf144Q9BQM9 153 aa12.35□□□□□ -0.43
AP4E1-202ENST00000558439 RHOGP84095 191 aa12.34□□□□□ -0.43
AP4E1-202ENST00000558439 FAM71F2Q6NXP2 309 aa12.34□□□□□ -0.43
AP4E1-202ENST00000558439 C12orf54Q6X4T0 127 aa12.34□□□□□ -0.43
AP4E1-202ENST00000558439 FER1L6-AS1Q8NA97 138 aa12.34□□□□□ -0.43
AP4E1-202ENST00000558439 TMEM208Q9BTX3 173 aa12.34□□□□□ -0.43
AP4E1-202ENST00000558439 VMO1Q7Z5L0 202 aa12.34□□□□□ -0.43
AP4E1-202ENST00000558439 SMIM17P0DL12 118 aa12.34□□□□□ -0.43
AP4E1-202ENST00000558439 TM4SF20Q53R12 229 aa12.34□□□□□ -0.43
AP4E1-202ENST00000558439 LYZL1Q6UWQ5 148 aa12.34□□□□□ -0.43
AP4E1-202ENST00000558439 NEU4Q8WWR8 484 aaPredicted RBP12.34□□□□□ -0.43
AP4E1-202ENST00000558439 ALKBH7Q9BT30 221 aaPredicted RBP12.34□□□□□ -0.43
AP4E1-202ENST00000558439 ORMDL3Q8N138 153 aa12.33□□□□□ -0.43
AP4E1-202ENST00000558439 MRPL27Q9P0M9 148 aaKnown RBP12.33□□□□□ -0.43
AP4E1-202ENST00000558439 IGLC1P0CG04 106 aa12.33□□□□□ -0.44
AP4E1-202ENST00000558439 MAP1LC3AQ9H492 121 aa12.33□□□□□ -0.44
AP4E1-202ENST00000558439 IGHV3-11P01762 117 aa12.33□□□□□ -0.44
AP4E1-202ENST00000558439 HTN1P15515 57 aa12.33□□□□□ -0.44
AP4E1-202ENST00000558439 TMEM219Q86XT9 240 aa12.33□□□□□ -0.44
AP4E1-202ENST00000558439 DLEU1O43261 78 aa12.33□□□□□ -0.44
AP4E1-202ENST00000558439 C15orf32Q32M92 178 aa12.33□□□□□ -0.44
AP4E1-202ENST00000558439 RASL11AQ6T310 242 aa12.33□□□□□ -0.44
AP4E1-202ENST00000558439 D6R8Y8 96 aa12.32□□□□□ -0.44
AP4E1-202ENST00000558439 PTPN13Q12923 2485 aa12.32□□□□□ -0.44
AP4E1-202ENST00000558439 C7orf71A4D174 169 aa12.32□□□□□ -0.44
AP4E1-202ENST00000558439 SMKR1H3BMG3 65 aa12.32□□□□□ -0.44
AP4E1-202ENST00000558439 THAP8Q8NA92 274 aa12.32□□□□□ -0.44
AP4E1-202ENST00000558439 ZNF414Q96IQ9 312 aa12.32□□□□□ -0.44
AP4E1-202ENST00000558439 COL6A3P12111 3177 aa12.32□□□□□ -0.44
AP4E1-202ENST00000558439 FRYQ5TBA9 3013 aa12.32□□□□□ -0.44
AP4E1-202ENST00000558439 FBLL1A6NHQ2 334 aaKnown RBP12.31□□□□□ -0.44
AP4E1-202ENST00000558439 EVI2AP22794 236 aa12.31□□□□□ -0.44
AP4E1-202ENST00000558439 AMN1Q8IY45 258 aa12.31□□□□□ -0.44
AP4E1-202ENST00000558439 TRGV3P03979 118 aa12.31□□□□□ -0.44
AP4E1-202ENST00000558439 TSPOP30536 169 aa12.31□□□□□ -0.44
AP4E1-202ENST00000558439 ATP5G2Q06055 141 aa12.31□□□□□ -0.44
AP4E1-202ENST00000558439 C8orf49Q96NF6 230 aa12.31□□□□□ -0.44
AP4E1-202ENST00000558439 SHANK2-AS3Q9BTD1 123 aa12.31□□□□□ -0.44
AP4E1-202ENST00000558439 NDUFS7O75251 213 aa12.31□□□□□ -0.44
AP4E1-202ENST00000558439 TCF15Q12870 199 aa12.31□□□□□ -0.44
AP4E1-202ENST00000558439 FAM231DQ6ZW35 169 aa12.31□□□□□ -0.44
AP4E1-202ENST00000558439 MYOZ3Q8TDC0 251 aa12.31□□□□□ -0.44
AP4E1-202ENST00000558439 C1orf159Q96HA4 380 aa12.31□□□□□ -0.44
AP4E1-202ENST00000558439 DSPP15924 2871 aaKnown RBP12.31□□□□□ -0.44
AP4E1-202ENST00000558439 SYS1-DBNDD2H3BUS1 97 aa12.3□□□□□ -0.44
AP4E1-202ENST00000558439 IGLC2P0DOY2 106 aa12.3□□□□□ -0.44
AP4E1-202ENST00000558439 IGLC3P0DOY3 106 aa12.3□□□□□ -0.44
AP4E1-202ENST00000558439 MPV17L2Q567V2 206 aa12.3□□□□□ -0.44
AP4E1-202ENST00000558439 TEX43Q6ZNM6 134 aa12.3□□□□□ -0.44
AP4E1-202ENST00000558439 KAAG1Q9UBP8 84 aa12.3□□□□□ -0.44
AP4E1-202ENST00000558439 MGAQ8IWI9 3026 aa12.3□□□□□ -0.44
AP4E1-202ENST00000558439 NBEAQ8NFP9 2946 aa12.3□□□□□ -0.44
AP4E1-202ENST00000558439 TMEM213A2RRL7 107 aa12.3□□□□□ -0.44
AP4E1-202ENST00000558439 K7ENP7 123 aa12.3□□□□□ -0.44
AP4E1-202ENST00000558439 PSG3Q16557 428 aa12.3□□□□□ -0.44
AP4E1-202ENST00000558439 M0R381 172 aa12.3□□□□□ -0.44
AP4E1-202ENST00000558439 NDUFB8O95169 186 aa12.3□□□□□ -0.44
AP4E1-202ENST00000558439 GCSHP23434 173 aa12.3□□□□□ -0.44
AP4E1-202ENST00000558439 RPS20P60866 119 aaKnown RBP12.3□□□□□ -0.44
AP4E1-202ENST00000558439 CACNG7P62955 275 aa12.3□□□□□ -0.44
AP4E1-202ENST00000558439 PIEZO1Q92508 2521 aa12.3□□□□□ -0.44
AP4E1-202ENST00000558439 IGLV2-23P01705 113 aa12.3□□□□□ -0.44
AP4E1-202ENST00000558439 CHCHD1Q96BP2 118 aaKnown RBP12.3□□□□□ -0.44
AP4E1-202ENST00000558439 IGF2BP2-AS1Q96M15 143 aa12.3□□□□□ -0.44
AP4E1-202ENST00000558439 TRBV19A0A075B6N1 114 aa12.29□□□□□ -0.44
AP4E1-202ENST00000558439 Q6ZVH6 145 aa12.29□□□□□ -0.44
AP4E1-202ENST00000558439 EEF1AKMT3Q96AZ1 226 aa12.29□□□□□ -0.44
AP4E1-202ENST00000558439 FABP5P3A8MUU1 101 aa12.29□□□□□ -0.44
AP4E1-202ENST00000558439 NPSP0C0P6 89 aa12.29□□□□□ -0.44
AP4E1-202ENST00000558439 NDPQ00604 133 aa12.29□□□□□ -0.44
AP4E1-202ENST00000558439 TMEM97Q5BJF2 176 aa12.29□□□□□ -0.44
AP4E1-202ENST00000558439 IGLL1P15814 213 aa12.29□□□□□ -0.44
AP4E1-202ENST00000558439 SP5Q6BEB4 398 aaPredicted RBP12.29□□□□□ -0.44
AP4E1-202ENST00000558439 GLMPQ8WWB7 406 aa12.29□□□□□ -0.44
AP4E1-202ENST00000558439 SH2D1AO60880 128 aa12.28□□□□□ -0.44
AP4E1-202ENST00000558439 ZC2HC1AQ96GY0 325 aa12.28□□□□□ -0.44
AP4E1-202ENST00000558439 KIR2DL5BA0A0G2JN68 375 aa12.28□□□□□ -0.44
AP4E1-202ENST00000558439 KIR2DL5BA0A0G2JPC4 375 aa12.28□□□□□ -0.44
AP4E1-202ENST00000558439 PRTN3P24158 256 aa12.28□□□□□ -0.44
AP4E1-202ENST00000558439 IFI27P40305 119 aaPredicted RBP12.28□□□□□ -0.44
AP4E1-202ENST00000558439 Q6AWC8 147 aa12.28□□□□□ -0.44
AP4E1-202ENST00000558439 KIR2DL5AQ8N109 375 aa12.28□□□□□ -0.44
AP4E1-202ENST00000558439 RNF5Q99942 180 aa12.28□□□□□ -0.44
AP4E1-202ENST00000558439 A0A087X0K7 114 aa12.28□□□□□ -0.44
AP4E1-202ENST00000558439 A6NDN8 102 aa12.28□□□□□ -0.44
AP4E1-202ENST00000558439 IGKV3-20P01619 116 aa12.28□□□□□ -0.44
AP4E1-202ENST00000558439 TMEM160Q9NX00 188 aa12.28□□□□□ -0.44
AP4E1-202ENST00000558439 IGKV1D-37A0A075B6S9 117 aa12.27□□□□□ -0.44
AP4E1-202ENST00000558439 GAGE10A6NGK3 116 aa12.27□□□□□ -0.44
AP4E1-202ENST00000558439 RPL24P83731 157 aaKnown RBP12.27□□□□□ -0.44
AP4E1-202ENST00000558439 HIST1H1AQ02539 215 aaPredicted RBP12.27□□□□□ -0.44
AP4E1-202ENST00000558439 ERCC8Q13216 396 aa12.27□□□□□ -0.44
AP4E1-202ENST00000558439 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.27□□□□□ -0.44
AP4E1-202ENST00000558439 IGKV1-17P01599 117 aa12.27□□□□□ -0.45
AP4E1-202ENST00000558439 OR10J6PQ8NGY7 276 aa12.27□□□□□ -0.45
AP4E1-202ENST00000558439 IGLV2-8P01709 118 aa12.27□□□□□ -0.45
AP4E1-202ENST00000558439 BRD3OSQ6XYD6 125 aa12.27□□□□□ -0.45
AP4E1-202ENST00000558439 NAA38Q9BRA0 125 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms