RNA–Protein interactions for RNA: ENST00000558373.5

CTDSPL2-202, Transcript of CTD small phosphatase like 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSPL2, Length 4,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-202ENST00000558373 ELOBQ15370 118 aa0.75□□□□□ -2.29
CTDSPL2-202ENST00000558373 XAF1Q6GPH4 301 aa0.75□□□□□ -2.29
CTDSPL2-202ENST00000558373 SLC35F6Q8N357 371 aa0.75□□□□□ -2.29
CTDSPL2-202ENST00000558373 TMEM35BQ8NCS4 154 aa0.75□□□□□ -2.29
CTDSPL2-202ENST00000558373 OR11H6Q8NGC7 330 aa0.75□□□□□ -2.29
CTDSPL2-202ENST00000558373 OR8J3Q8NGG0 315 aa0.75□□□□□ -2.29
CTDSPL2-202ENST00000558373 ZNRF2Q8NHG8 242 aa0.75□□□□□ -2.29
CTDSPL2-202ENST00000558373 RAB2BQ8WUD1 216 aa0.75□□□□□ -2.29
CTDSPL2-202ENST00000558373 FAM172AQ8WUF8 416 aa0.75□□□□□ -2.29
CTDSPL2-202ENST00000558373 POP5Q969H6 163 aaKnown RBP0.75□□□□□ -2.29
CTDSPL2-202ENST00000558373 IGF2BP2-AS1Q96M15 143 aa0.75□□□□□ -2.29
CTDSPL2-202ENST00000558373 TPT1P8Q9HAU6 139 aa0.75□□□□□ -2.29
CTDSPL2-202ENST00000558373 PAIP2BQ9ULR5 123 aaKnown RBP0.75□□□□□ -2.29
CTDSPL2-202ENST00000558373 TIMM9Q9Y5J7 89 aa0.75□□□□□ -2.29
CTDSPL2-202ENST00000558373 FER1L5A0AVI2 2057 aa0.75□□□□□ -2.29
CTDSPL2-202ENST00000558373 ZFC3H1O60293 1989 aaKnown RBP0.75□□□□□ -2.29
CTDSPL2-202ENST00000558373 TMED7-TICAM2A0A0A6YYA0 188 aa0.75□□□□□ -2.29
CTDSPL2-202ENST00000558373 TRAV41A0A0B4J266 112 aa0.75□□□□□ -2.29
CTDSPL2-202ENST00000558373 A0A1B0GV90 55 aa0.75□□□□□ -2.29
CTDSPL2-202ENST00000558373 TMEM189A5PLL7 270 aa0.75□□□□□ -2.29
CTDSPL2-202ENST00000558373 OR11H12B2RN74 326 aa0.75□□□□□ -2.29
CTDSPL2-202ENST00000558373 SDCBPO00560 298 aaPredicted RBP0.75□□□□□ -2.29
CTDSPL2-202ENST00000558373 C1QBP02746 253 aa0.75□□□□□ -2.29
CTDSPL2-202ENST00000558373 ARL14EPLP0DKL9 152 aa0.75□□□□□ -2.29
CTDSPL2-202ENST00000558373 HRES1P13985 223 aa0.75□□□□□ -2.29
CTDSPL2-202ENST00000558373 CXCL3P19876 107 aa0.75□□□□□ -2.29
CTDSPL2-202ENST00000558373 RPS4Y1P22090 263 aaKnown RBP0.75□□□□□ -2.29
CTDSPL2-202ENST00000558373 CSN1S1P47710 185 aa0.75□□□□□ -2.29
CTDSPL2-202ENST00000558373 SERPINB9P50453 376 aa0.75□□□□□ -2.29
CTDSPL2-202ENST00000558373 RPL19P84098 196 aaKnown RBP0.75□□□□□ -2.29
CTDSPL2-202ENST00000558373 BSPH1Q075Z2 132 aa0.75□□□□□ -2.29
CTDSPL2-202ENST00000558373 PRDX4Q13162 271 aa0.75□□□□□ -2.29
CTDSPL2-202ENST00000558373 SLC9A3R2Q15599 337 aa0.75□□□□□ -2.29
CTDSPL2-202ENST00000558373 LRRC75BQ2VPJ9 315 aa0.75□□□□□ -2.29
CTDSPL2-202ENST00000558373 AKR1C8PQ5T2L2 129 aa0.75□□□□□ -2.29
CTDSPL2-202ENST00000558373 HES3Q5TGS1 186 aa0.75□□□□□ -2.29
CTDSPL2-202ENST00000558373 FOXI2Q6ZQN5 318 aa0.75□□□□□ -2.29
CTDSPL2-202ENST00000558373 ADM2Q7Z4H4 148 aa0.75□□□□□ -2.29
CTDSPL2-202ENST00000558373 TCTE3Q8IZS6 198 aa0.75□□□□□ -2.29
CTDSPL2-202ENST00000558373 LINC00471Q8N535 108 aa0.75□□□□□ -2.29
CTDSPL2-202ENST00000558373 TMEM75Q8N9X5 138 aa0.75□□□□□ -2.29
CTDSPL2-202ENST00000558373 OR51D1Q8NGF3 324 aa0.75□□□□□ -2.29
CTDSPL2-202ENST00000558373 OR11H2Q8NH07 326 aa0.75□□□□□ -2.29
CTDSPL2-202ENST00000558373 RTBDNQ9BSG5 229 aaPredicted RBP0.75□□□□□ -2.29
CTDSPL2-202ENST00000558373 TRABDQ9H4I3 376 aa0.75□□□□□ -2.29
CTDSPL2-202ENST00000558373 PLIN4Q96Q06 1357 aa0.74□□□□□ -2.29
CTDSPL2-202ENST00000558373 USH2AO75445 5202 aa0.74□□□□□ -2.29
CTDSPL2-202ENST00000558373 TRBV20OR9-2A0A075B6H5 130 aa0.74□□□□□ -2.29
CTDSPL2-202ENST00000558373 IGLV10-54A0A075B6I4 117 aa0.74□□□□□ -2.29
CTDSPL2-202ENST00000558373 TRGV10A0A0A0MS01 117 aa0.74□□□□□ -2.29
CTDSPL2-202ENST00000558373 A0A0J9YY10 115 aa0.74□□□□□ -2.29
CTDSPL2-202ENST00000558373 SMIM31A0A1B0GVY4 71 aa0.74□□□□□ -2.29
CTDSPL2-202ENST00000558373 A0A1B0GX78 115 aa0.74□□□□□ -2.29
CTDSPL2-202ENST00000558373 IGSF23A1L1A6 192 aa0.74□□□□□ -2.29
CTDSPL2-202ENST00000558373 ZNF860A6NHJ4 632 aa0.74□□□□□ -2.29
CTDSPL2-202ENST00000558373 GPX1P07203 203 aa0.74□□□□□ -2.29
CTDSPL2-202ENST00000558373 P0C880 135 aa0.74□□□□□ -2.29
CTDSPL2-202ENST00000558373 TMEM258P61165 79 aa0.74□□□□□ -2.29
CTDSPL2-202ENST00000558373 RPL30P62888 115 aaKnown RBP0.74□□□□□ -2.29
CTDSPL2-202ENST00000558373 ARHGAP11BQ3KRB8 267 aa0.74□□□□□ -2.29
CTDSPL2-202ENST00000558373 PYY3Q5JQD4 70 aa0.74□□□□□ -2.29
CTDSPL2-202ENST00000558373 C1orf174Q8IYL3 243 aa0.74□□□□□ -2.29
CTDSPL2-202ENST00000558373 PACRGLQ8N7B6 248 aa0.74□□□□□ -2.29
CTDSPL2-202ENST00000558373 GDPD1Q8N9F7 314 aa0.74□□□□□ -2.29
CTDSPL2-202ENST00000558373 NUP35Q8NFH5 326 aa0.74□□□□□ -2.29
CTDSPL2-202ENST00000558373 OR4D11Q8NGI4 311 aa0.74□□□□□ -2.29
CTDSPL2-202ENST00000558373 MRPL30Q8TCC3 161 aaKnown RBP0.74□□□□□ -2.29
CTDSPL2-202ENST00000558373 ZNF431Q8TF32 576 aaPredicted RBP0.74□□□□□ -2.29
CTDSPL2-202ENST00000558373 MBD3L1Q8WWY6 194 aa0.74□□□□□ -2.29
CTDSPL2-202ENST00000558373 C20orf166-AS1Q96NR2 134 aa0.74□□□□□ -2.29
CTDSPL2-202ENST00000558373 SCGB3A1Q96QR1 104 aa0.74□□□□□ -2.29
CTDSPL2-202ENST00000558373 NAA38Q9BRA0 125 aaKnown RBP0.74□□□□□ -2.29
CTDSPL2-202ENST00000558373 PBOV1Q9GZY1 135 aa0.74□□□□□ -2.29
CTDSPL2-202ENST00000558373 DCSTAMPQ9H295 470 aa0.74□□□□□ -2.29
CTDSPL2-202ENST00000558373 OR51I1Q9H343 314 aa0.74□□□□□ -2.29
CTDSPL2-202ENST00000558373 METTL1Q9UBP6 276 aaKnown RBP0.74□□□□□ -2.29
CTDSPL2-202ENST00000558373 CYSLTR1Q9Y271 337 aa0.74□□□□□ -2.29
CTDSPL2-202ENST00000558373 U3KQK5 164 aa0.74□□□□□ -2.29
CTDSPL2-202ENST00000558373 LRRK1Q38SD2 2015 aa0.74□□□□□ -2.29
CTDSPL2-202ENST00000558373 G3V2T6 193 aa0.74□□□□□ -2.29
CTDSPL2-202ENST00000558373 PGLYRP1O75594 196 aaPredicted RBP0.74□□□□□ -2.29
CTDSPL2-202ENST00000558373 FABP1P07148 127 aa0.74□□□□□ -2.29
CTDSPL2-202ENST00000558373 SMIM10L2AP0DMW4 78 aa0.74□□□□□ -2.29
CTDSPL2-202ENST00000558373 SMIM10L2BP0DMW5 78 aa0.74□□□□□ -2.29
CTDSPL2-202ENST00000558373 S100A2P29034 98 aa0.74□□□□□ -2.29
CTDSPL2-202ENST00000558373 S100A7P31151 101 aa0.74□□□□□ -2.29
CTDSPL2-202ENST00000558373 LINC00313P59037 77 aa0.74□□□□□ -2.29
CTDSPL2-202ENST00000558373 GNG2P59768 71 aa0.74□□□□□ -2.29
CTDSPL2-202ENST00000558373 RAB14P61106 215 aa0.74□□□□□ -2.29
CTDSPL2-202ENST00000558373 HSPE1P61604 102 aaKnown RBP0.74□□□□□ -2.29
CTDSPL2-202ENST00000558373 FOXF1Q12946 379 aa0.74□□□□□ -2.29
CTDSPL2-202ENST00000558373 XKRXQ6PP77 449 aa0.74□□□□□ -2.29
CTDSPL2-202ENST00000558373 SCIMPQ6UWF3 145 aa0.74□□□□□ -2.29
CTDSPL2-202ENST00000558373 KTN1-AS1Q86SY8 53 aa0.74□□□□□ -2.29
CTDSPL2-202ENST00000558373 RPP25LQ8N5L8 163 aaKnown RBP0.74□□□□□ -2.29
CTDSPL2-202ENST00000558373 PPP1R1CQ8WVI7 109 aa0.74□□□□□ -2.29
CTDSPL2-202ENST00000558373 CANT1Q8WVQ1 401 aa0.74□□□□□ -2.29
CTDSPL2-202ENST00000558373 CST9LQ9H4G1 147 aa0.74□□□□□ -2.29
CTDSPL2-202ENST00000558373 CISHQ9NSE2 258 aa0.74□□□□□ -2.29
CTDSPL2-202ENST00000558373 TMEM106BQ9NUM4 274 aa0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms