RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 PRR27Q6MZM9 219 aa6.53□□□□□ -1.36
SPG11-209ENST00000558253 SIGLEC15Q6ZMC9 328 aa6.53□□□□□ -1.36
SPG11-209ENST00000558253 KRTAP1-3Q8IUG1 177 aa6.53□□□□□ -1.36
SPG11-209ENST00000558253 Q8N9W7 124 aa6.53□□□□□ -1.36
SPG11-209ENST00000558253 GATD1Q8NB37 220 aa6.53□□□□□ -1.36
SPG11-209ENST00000558253 FAM168AQ92567 244 aa6.53□□□□□ -1.36
SPG11-209ENST00000558253 ALKBH7Q9BT30 221 aaPredicted RBP6.53□□□□□ -1.36
SPG11-209ENST00000558253 UQCR10Q9UDW1 63 aa6.53□□□□□ -1.36
SPG11-209ENST00000558253 FBXL7Q9UJT9 491 aa6.53□□□□□ -1.36
SPG11-209ENST00000558253 PSG8Q9UQ74 426 aa6.53□□□□□ -1.36
SPG11-209ENST00000558253 CHTOPQ9Y3Y2 248 aaKnown RBP6.53□□□□□ -1.36
SPG11-209ENST00000558253 POLEQ07864 2286 aa6.53□□□□□ -1.36
SPG11-209ENST00000558253 TNCP24821 2201 aa6.53□□□□□ -1.36
SPG11-209ENST00000558253 ICE1Q9Y2F5 2266 aa6.52□□□□□ -1.37
SPG11-209ENST00000558253 AKAP13Q12802 2813 aa6.52□□□□□ -1.37
SPG11-209ENST00000558253 ANKRD11Q6UB99 2663 aaPredicted RBP6.52□□□□□ -1.37
SPG11-209ENST00000558253 TRBV7-1A0A0A6YYK4 115 aa6.52□□□□□ -1.37
SPG11-209ENST00000558253 IGHV3-21A0A0B4J1V1 117 aa6.52□□□□□ -1.37
SPG11-209ENST00000558253 IGHV7-81A0A0B4J1V7 117 aa6.52□□□□□ -1.37
SPG11-209ENST00000558253 NPFFO15130 113 aa6.52□□□□□ -1.37
SPG11-209ENST00000558253 NUPR1O60356 82 aa6.52□□□□□ -1.37
SPG11-209ENST00000558253 LY6HO94772 140 aa6.52□□□□□ -1.37
SPG11-209ENST00000558253 IGLV2-11P01706 119 aa6.52□□□□□ -1.37
SPG11-209ENST00000558253 BMI1P35226 326 aa6.52□□□□□ -1.37
SPG11-209ENST00000558253 AMTP48728 403 aa6.52□□□□□ -1.37
SPG11-209ENST00000558253 DLX1P56177 255 aa6.52□□□□□ -1.37
SPG11-209ENST00000558253 LINC00310P59036 64 aa6.52□□□□□ -1.37
SPG11-209ENST00000558253 KLRD1Q13241 179 aa6.52□□□□□ -1.37
SPG11-209ENST00000558253 C21orf62-AS1Q17RA5 79 aa6.52□□□□□ -1.37
SPG11-209ENST00000558253 GOLT1AQ6ZVE7 132 aa6.52□□□□□ -1.37
SPG11-209ENST00000558253 Q6ZWC4 215 aa6.52□□□□□ -1.37
SPG11-209ENST00000558253 C18orf32Q8TCD1 76 aa6.52□□□□□ -1.37
SPG11-209ENST00000558253 TBX15Q96SF7 602 aa6.52□□□□□ -1.37
SPG11-209ENST00000558253 NRN1Q9NPD7 142 aa6.52□□□□□ -1.37
SPG11-209ENST00000558253 MALRD1Q5VYJ5 2156 aa6.51□□□□□ -1.37
SPG11-209ENST00000558253 A0A087X0K7 114 aa6.51□□□□□ -1.37
SPG11-209ENST00000558253 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.51□□□□□ -1.37
SPG11-209ENST00000558253 A0A1B0GUT8 65 aa6.51□□□□□ -1.37
SPG11-209ENST00000558253 CHEK1O14757 476 aa6.51□□□□□ -1.37
SPG11-209ENST00000558253 SPINK4O60575 86 aa6.51□□□□□ -1.37
SPG11-209ENST00000558253 HSBP1O75506 76 aa6.51□□□□□ -1.37
SPG11-209ENST00000558253 CA1P00915 261 aaPredicted RBP6.51□□□□□ -1.37
SPG11-209ENST00000558253 CTSGP08311 255 aa6.51□□□□□ -1.37
SPG11-209ENST00000558253 EGR2P11161 476 aaPredicted RBP6.51□□□□□ -1.37
SPG11-209ENST00000558253 CDKN1AP38936 164 aa6.51□□□□□ -1.37
SPG11-209ENST00000558253 CRIP2P52943 208 aaPredicted RBP6.51□□□□□ -1.37
SPG11-209ENST00000558253 DSCR9P59020 149 aa6.51□□□□□ -1.37
SPG11-209ENST00000558253 PAX8Q06710 450 aa6.51□□□□□ -1.37
SPG11-209ENST00000558253 SLAQ13239 276 aa6.51□□□□□ -1.37
SPG11-209ENST00000558253 PRNTQ86SH4 94 aa6.51□□□□□ -1.37
SPG11-209ENST00000558253 EXOC3-AS1Q8N2X6 119 aa6.51□□□□□ -1.37
SPG11-209ENST00000558253 ZNF738Q8NE65 137 aa6.51□□□□□ -1.37
SPG11-209ENST00000558253 ZNF502Q8TBZ5 544 aa6.51□□□□□ -1.37
SPG11-209ENST00000558253 EEF1AKMT3Q96AZ1 226 aa6.51□□□□□ -1.37
SPG11-209ENST00000558253 MRPL53Q96EL3 112 aaKnown RBP6.51□□□□□ -1.37
SPG11-209ENST00000558253 PIMREGQ9BSJ6 248 aa6.51□□□□□ -1.37
SPG11-209ENST00000558253 HIF1ANQ9NWT6 349 aa6.51□□□□□ -1.37
SPG11-209ENST00000558253 RPH3ALQ9UNE2 315 aa6.51□□□□□ -1.37
SPG11-209ENST00000558253 CFAP47Q6ZTR5 3102 aa6.5□□□□□ -1.37
SPG11-209ENST00000558253 RP1L1Q8IWN7 2480 aaPredicted RBP6.5□□□□□ -1.37
SPG11-209ENST00000558253 CENPVL3A0A0U1RRI6 287 aa6.5□□□□□ -1.37
SPG11-209ENST00000558253 RBAKDNA6NC62 111 aa6.5□□□□□ -1.37
SPG11-209ENST00000558253 FAM223BA6NKX1 122 aa6.5□□□□□ -1.37
SPG11-209ENST00000558253 HSBP1L1C9JCN9 74 aa6.5□□□□□ -1.37
SPG11-209ENST00000558253 H3BUA1 57 aa6.5□□□□□ -1.37
SPG11-209ENST00000558253 CIDEAO60543 219 aa6.5□□□□□ -1.37
SPG11-209ENST00000558253 PTTG1IPP53801 180 aa6.5□□□□□ -1.37
SPG11-209ENST00000558253 RBX1P62877 108 aa6.5□□□□□ -1.37
SPG11-209ENST00000558253 SLC35B1P78383 322 aa6.5□□□□□ -1.37
SPG11-209ENST00000558253 PRB3Q04118 309 aaPredicted RBP6.5□□□□□ -1.37
SPG11-209ENST00000558253 UBE2V1Q13404 147 aa6.5□□□□□ -1.37
SPG11-209ENST00000558253 UNQ5815/PRO19632Q6UWF5 114 aa6.5□□□□□ -1.37
SPG11-209ENST00000558253 FAM223AQ8IWN6 122 aa6.5□□□□□ -1.37
SPG11-209ENST00000558253 DYNAPQ8N1N2 210 aa6.5□□□□□ -1.37
SPG11-209ENST00000558253 SLC50A1Q9BRV3 221 aa6.5□□□□□ -1.37
SPG11-209ENST00000558253 MRPS16Q9Y3D3 137 aaKnown RBP6.5□□□□□ -1.37
SPG11-209ENST00000558253 PTPRZ1P23471 2315 aaPredicted RBP6.49□□□□□ -1.37
SPG11-209ENST00000558253 PTPRQQ9UMZ3 2332 aa6.49□□□□□ -1.37
SPG11-209ENST00000558253 LOC102724200A0A096LPH7 203 aaPredicted RBP6.49□□□□□ -1.37
SPG11-209ENST00000558253 TCF21O43680 179 aa6.49□□□□□ -1.37
SPG11-209ENST00000558253 FRMD6-AS1P0C7T7 363 aa6.49□□□□□ -1.37
SPG11-209ENST00000558253 GATA3P23771 443 aa6.49□□□□□ -1.37
SPG11-209ENST00000558253 SAA4P35542 130 aa6.49□□□□□ -1.37
SPG11-209ENST00000558253 CAMPP49913 170 aa6.49□□□□□ -1.37
SPG11-209ENST00000558253 KRTDAPP60985 99 aa6.49□□□□□ -1.37
SPG11-209ENST00000558253 LY6DQ14210 128 aa6.49□□□□□ -1.37
SPG11-209ENST00000558253 KIAA1644Q3SXP7 199 aa6.49□□□□□ -1.37
SPG11-209ENST00000558253 GDF5OSQ5U4N7 250 aa6.49□□□□□ -1.37
SPG11-209ENST00000558253 SVIPQ8NHG7 77 aa6.49□□□□□ -1.37
SPG11-209ENST00000558253 GTSF1Q8WW33 167 aa6.49□□□□□ -1.37
SPG11-209ENST00000558253 AJUBAQ96IF1 538 aa6.49□□□□□ -1.37
SPG11-209ENST00000558253 PGLYRP4Q96LB8 373 aa6.49□□□□□ -1.37
SPG11-209ENST00000558253 KRTAP4-12Q9BQ66 201 aa6.49□□□□□ -1.37
SPG11-209ENST00000558253 FAM103A1Q9BTL3 118 aaKnown RBP6.49□□□□□ -1.37
SPG11-209ENST00000558253 BPESC1Q9GZL8 116 aa6.49□□□□□ -1.37
SPG11-209ENST00000558253 MEGF9Q9H1U4 602 aa6.49□□□□□ -1.37
SPG11-209ENST00000558253 MOB4Q9Y3A3 225 aa6.49□□□□□ -1.37
SPG11-209ENST00000558253 MGAQ8IWI9 3026 aa6.49□□□□□ -1.37
SPG11-209ENST00000558253 IGHV1-69DA0A0B4J2H0 117 aa6.48□□□□□ -1.37
SPG11-209ENST00000558253 A0A1B0GUS0 222 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 865.2 ms