RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 FABP5Q01469 135 aa4.21□□□□□ -1.74
VPS33B-207ENST00000557470 MLLT11Q13015 90 aaPredicted RBP4.21□□□□□ -1.74
VPS33B-207ENST00000557470 LGALS9BQ3B8N2 356 aa4.21□□□□□ -1.74
VPS33B-207ENST00000557470 LRRC37A5PQ49AS3 106 aa4.21□□□□□ -1.74
VPS33B-207ENST00000557470 FAM74A3Q4VXF1 159 aa4.21□□□□□ -1.74
VPS33B-207ENST00000557470 Q56UQ5 140 aa4.21□□□□□ -1.74
VPS33B-207ENST00000557470 PAPPA-AS1Q5QFB9 102 aa4.21□□□□□ -1.74
VPS33B-207ENST00000557470 MTURNQ8N3F0 131 aa4.21□□□□□ -1.74
VPS33B-207ENST00000557470 FAM24BQ8N5W8 94 aa4.21□□□□□ -1.74
VPS33B-207ENST00000557470 C15orf54Q8N8G6 183 aa4.21□□□□□ -1.74
VPS33B-207ENST00000557470 HSD17B11Q8NBQ5 300 aa4.21□□□□□ -1.74
VPS33B-207ENST00000557470 NUDCD2Q8WVJ2 157 aa4.21□□□□□ -1.74
VPS33B-207ENST00000557470 YIPF6Q96EC8 236 aa4.21□□□□□ -1.74
VPS33B-207ENST00000557470 SCRT1Q9BWW7 348 aa4.21□□□□□ -1.74
VPS33B-207ENST00000557470 PARD6GQ9BYG4 376 aaPredicted RBP4.21□□□□□ -1.74
VPS33B-207ENST00000557470 CELA1Q9UNI1 258 aa4.21□□□□□ -1.74
VPS33B-207ENST00000557470 TNFRSF18Q9Y5U5 241 aa4.21□□□□□ -1.74
VPS33B-207ENST00000557470 HSPG2P98160 4391 aa4.2□□□□□ -1.74
VPS33B-207ENST00000557470 IGLV2-18A0A075B6J9 118 aa4.2□□□□□ -1.74
VPS33B-207ENST00000557470 DEFB131BA0A096LNP1 70 aa4.2□□□□□ -1.74
VPS33B-207ENST00000557470 TEX50A0A1B0GTY4 177 aa4.2□□□□□ -1.74
VPS33B-207ENST00000557470 TMEM235A6NFC5 223 aa4.2□□□□□ -1.74
VPS33B-207ENST00000557470 FABP12A6NFH5 140 aa4.2□□□□□ -1.74
VPS33B-207ENST00000557470 IFITM5A6NNB3 132 aa4.2□□□□□ -1.74
VPS33B-207ENST00000557470 ZNF705EA8MWA4 302 aaPredicted RBP4.2□□□□□ -1.74
VPS33B-207ENST00000557470 SIVA1O15304 175 aa4.2□□□□□ -1.74
VPS33B-207ENST00000557470 ARPC5O15511 151 aa4.2□□□□□ -1.74
VPS33B-207ENST00000557470 CYB5BO43169 146 aa4.2□□□□□ -1.74
VPS33B-207ENST00000557470 RBFOX2O43251 390 aaKnown RBP eCLIP4.2□□□□□ -1.74
VPS33B-207ENST00000557470 HPGDSO60760 199 aa4.2□□□□□ -1.74
VPS33B-207ENST00000557470 YIF1AO95070 293 aa4.2□□□□□ -1.74
VPS33B-207ENST00000557470 MIFP14174 115 aa4.2□□□□□ -1.74
VPS33B-207ENST00000557470 PSMB9P28065 219 aa4.2□□□□□ -1.74
VPS33B-207ENST00000557470 RORCP51449 518 aa4.2□□□□□ -1.74
VPS33B-207ENST00000557470 CCR6P51684 374 aa4.2□□□□□ -1.74
VPS33B-207ENST00000557470 TAS2R31P59538 309 aa4.2□□□□□ -1.74
VPS33B-207ENST00000557470 DEFB131AP59861 70 aa4.2□□□□□ -1.74
VPS33B-207ENST00000557470 RPS20P60866 119 aaKnown RBP4.2□□□□□ -1.74
VPS33B-207ENST00000557470 POU2AF1Q16633 256 aa4.2□□□□□ -1.74
VPS33B-207ENST00000557470 C12orf74Q32Q52 190 aa4.2□□□□□ -1.74
VPS33B-207ENST00000557470 PIK3CD-AS1Q5SR53 167 aa4.2□□□□□ -1.74
VPS33B-207ENST00000557470 CNIH2Q6PI25 160 aa4.2□□□□□ -1.74
VPS33B-207ENST00000557470 Q6ZR54 194 aa4.2□□□□□ -1.74
VPS33B-207ENST00000557470 TCF24Q7RTU0 167 aa4.2□□□□□ -1.74
VPS33B-207ENST00000557470 Q8N1X5 172 aa4.2□□□□□ -1.74
VPS33B-207ENST00000557470 MAPKAPK5-AS1Q8N8E1 139 aa4.2□□□□□ -1.74
VPS33B-207ENST00000557470 DUSP18Q8NEJ0 188 aa4.2□□□□□ -1.74
VPS33B-207ENST00000557470 SECTM1Q8WVN6 248 aa4.2□□□□□ -1.74
VPS33B-207ENST00000557470 FCAMRQ8WWV6 532 aa4.2□□□□□ -1.74
VPS33B-207ENST00000557470 OR10C1Q96KK4 312 aa4.2□□□□□ -1.74
VPS33B-207ENST00000557470 MGLLQ99685 303 aa4.2□□□□□ -1.74
VPS33B-207ENST00000557470 TMEM208Q9BTX3 173 aa4.2□□□□□ -1.74
VPS33B-207ENST00000557470 MS4A6AQ9H2W1 248 aa4.2□□□□□ -1.74
VPS33B-207ENST00000557470 CCL28Q9NRJ3 127 aa4.2□□□□□ -1.74
VPS33B-207ENST00000557470 NDUFB11Q9NX14 153 aa4.2□□□□□ -1.74
VPS33B-207ENST00000557470 F11RQ9Y624 299 aaKnown RBP4.2□□□□□ -1.74
VPS33B-207ENST00000557470 TRAV14DV4A0A0A6YYC5 116 aa4.19□□□□□ -1.74
VPS33B-207ENST00000557470 IGHV3-66A0A0C4DH42 116 aa4.19□□□□□ -1.74
VPS33B-207ENST00000557470 A0A1B0GW15 77 aa4.19□□□□□ -1.74
VPS33B-207ENST00000557470 DISC1C4P0D8 188 aa4.19□□□□□ -1.74
VPS33B-207ENST00000557470 CDK2AP2O75956 126 aa4.19□□□□□ -1.74
VPS33B-207ENST00000557470 ATG12O94817 140 aa4.19□□□□□ -1.74
VPS33B-207ENST00000557470 TMEM50AO95807 157 aa4.19□□□□□ -1.74
VPS33B-207ENST00000557470 HPRT1P00492 218 aa4.19□□□□□ -1.74
VPS33B-207ENST00000557470 IFNA21P01568 189 aa4.19□□□□□ -1.74
VPS33B-207ENST00000557470 PTHLHP12272 177 aa4.19□□□□□ -1.74
VPS33B-207ENST00000557470 PSMA1P25786 263 aaKnown RBP4.19□□□□□ -1.74
VPS33B-207ENST00000557470 TGFBR1P36897 503 aa4.19□□□□□ -1.74
VPS33B-207ENST00000557470 PAFAH1B2P68402 229 aa4.19□□□□□ -1.74
VPS33B-207ENST00000557470 MRPS10P82664 201 aaKnown RBP4.19□□□□□ -1.74
VPS33B-207ENST00000557470 FABP9Q0Z7S8 132 aa4.19□□□□□ -1.74
VPS33B-207ENST00000557470 PEA15Q15121 130 aa4.19□□□□□ -1.74
VPS33B-207ENST00000557470 FCN2Q15485 313 aa4.19□□□□□ -1.74
VPS33B-207ENST00000557470 MSMO1Q15800 293 aa4.19□□□□□ -1.74
VPS33B-207ENST00000557470 BSXQ3C1V8 233 aa4.19□□□□□ -1.74
VPS33B-207ENST00000557470 C22orf42Q6IC83 251 aa4.19□□□□□ -1.74
VPS33B-207ENST00000557470 OR8G2PQ6IF36 304 aa4.19□□□□□ -1.74
VPS33B-207ENST00000557470 EIF5AL1Q6IS14 154 aaKnown RBP4.19□□□□□ -1.74
VPS33B-207ENST00000557470 STEAP1BQ6NZ63 245 aa4.19□□□□□ -1.74
VPS33B-207ENST00000557470 Q6ZRG5 221 aa4.19□□□□□ -1.74
VPS33B-207ENST00000557470 Q6ZSN1 163 aa4.19□□□□□ -1.74
VPS33B-207ENST00000557470 TRPT1Q86TN4 253 aaKnown RBP4.19□□□□□ -1.74
VPS33B-207ENST00000557470 SNX29P2Q8IUI4 249 aa4.19□□□□□ -1.74
VPS33B-207ENST00000557470 INO80EQ8NBZ0 244 aaPredicted RBP4.19□□□□□ -1.74
VPS33B-207ENST00000557470 OR1L8Q8NGR8 309 aa4.19□□□□□ -1.74
VPS33B-207ENST00000557470 OR51H1Q8NH63 302 aa4.19□□□□□ -1.74
VPS33B-207ENST00000557470 LSM10Q969L4 123 aaKnown RBP4.19□□□□□ -1.74
VPS33B-207ENST00000557470 C7orf50Q9BRJ6 194 aaKnown RBP4.19□□□□□ -1.74
VPS33B-207ENST00000557470 ATG5Q9H1Y0 275 aa4.19□□□□□ -1.74
VPS33B-207ENST00000557470 MED28Q9H204 178 aa4.19□□□□□ -1.74
VPS33B-207ENST00000557470 RNF167Q9H6Y7 350 aa4.19□□□□□ -1.74
VPS33B-207ENST00000557470 VSIRQ9H7M9 311 aa4.19□□□□□ -1.74
VPS33B-207ENST00000557470 SMCO4Q9NRQ5 59 aa4.19□□□□□ -1.74
VPS33B-207ENST00000557470 NDUFA4L2Q9NRX3 87 aa4.19□□□□□ -1.74
VPS33B-207ENST00000557470 ANXA10Q9UJ72 324 aa4.19□□□□□ -1.74
VPS33B-207ENST00000557470 AGRNO00468 2067 aa4.18□□□□□ -1.74
VPS33B-207ENST00000557470 TRAV2A0A0B4J234 112 aa4.18□□□□□ -1.74
VPS33B-207ENST00000557470 TRAV1-2A0A0B4J238 106 aa4.18□□□□□ -1.74
VPS33B-207ENST00000557470 hDV102S1A0JD36 115 aa4.18□□□□□ -1.74
VPS33B-207ENST00000557470 GAGE12JA6NER3 117 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms