RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 NPIPB6E9PJ23 425 aa13.92□□□□□ -0.18
XRCC3-218ENST00000557439 NDUFS7O75251 213 aa13.92□□□□□ -0.18
XRCC3-218ENST00000557439 CT83Q5H943 113 aa13.92□□□□□ -0.18
XRCC3-218ENST00000557439 FANCD2OSQ96PS1 177 aa13.92□□□□□ -0.18
XRCC3-218ENST00000557439 DLEU1O43261 78 aa13.92□□□□□ -0.18
XRCC3-218ENST00000557439 GNG7O60262 68 aa13.92□□□□□ -0.18
XRCC3-218ENST00000557439 ADORA2A-AS1P86434 159 aa13.92□□□□□ -0.18
XRCC3-218ENST00000557439 PMCHL2Q9BQD1 86 aa13.92□□□□□ -0.18
XRCC3-218ENST00000557439 PSG8Q9UQ74 426 aa13.92□□□□□ -0.18
XRCC3-218ENST00000557439 HOXB4P17483 251 aaPredicted RBP13.91□□□□□ -0.18
XRCC3-218ENST00000557439 ZNF414Q96IQ9 312 aa13.91□□□□□ -0.18
XRCC3-218ENST00000557439 LAMTOR2Q9Y2Q5 125 aa13.91□□□□□ -0.18
XRCC3-218ENST00000557439 COL12A1Q99715 3063 aa13.91□□□□□ -0.18
XRCC3-218ENST00000557439 VPS13CQ709C8 3753 aa13.91□□□□□ -0.18
XRCC3-218ENST00000557439 hDV102S1A0JD36 115 aa13.91□□□□□ -0.18
XRCC3-218ENST00000557439 MRPS12O15235 138 aaKnown RBP13.91□□□□□ -0.18
XRCC3-218ENST00000557439 SPTBN4Q9H254 2564 aa13.91□□□□□ -0.18
XRCC3-218ENST00000557439 F8W735 103 aaPredicted RBP13.9□□□□□ -0.18
XRCC3-218ENST00000557439 C5orf64Q2M2E5 130 aa13.9□□□□□ -0.18
XRCC3-218ENST00000557439 TMEM70Q9BUB7 260 aa13.9□□□□□ -0.18
XRCC3-218ENST00000557439 LOC105371242A0A075B767 164 aa13.9□□□□□ -0.18
XRCC3-218ENST00000557439 TRAV9-2A0A087WT02 112 aa13.9□□□□□ -0.18
XRCC3-218ENST00000557439 TSPOP30536 169 aa13.9□□□□□ -0.18
XRCC3-218ENST00000557439 OR11H6Q8NGC7 330 aa13.9□□□□□ -0.18
XRCC3-218ENST00000557439 TMUB1Q9BVT8 246 aa13.9□□□□□ -0.18
XRCC3-218ENST00000557439 RAXQ9Y2V3 346 aa13.9□□□□□ -0.18
XRCC3-218ENST00000557439 OR2T8A6NH00 312 aa13.89□□□□□ -0.19
XRCC3-218ENST00000557439 NDUFB8O95169 186 aa13.89□□□□□ -0.19
XRCC3-218ENST00000557439 LINC00614P0C842 121 aa13.89□□□□□ -0.19
XRCC3-218ENST00000557439 GFRA4Q9GZZ7 299 aa13.89□□□□□ -0.19
XRCC3-218ENST00000557439 IGKV2-40A0A087WW87 121 aaPredicted RBP13.89□□□□□ -0.19
XRCC3-218ENST00000557439 OR4C46A6NHA9 309 aa13.89□□□□□ -0.19
XRCC3-218ENST00000557439 LEPROTL1O95214 131 aa13.89□□□□□ -0.19
XRCC3-218ENST00000557439 IGKV2D-40P01614 121 aaPredicted RBP13.89□□□□□ -0.19
XRCC3-218ENST00000557439 PSG3Q16557 428 aa13.89□□□□□ -0.19
XRCC3-218ENST00000557439 COL5A1-AS1Q5SY13 56 aa13.89□□□□□ -0.19
XRCC3-218ENST00000557439 ARL6IP6Q8N6S5 226 aa13.89□□□□□ -0.19
XRCC3-218ENST00000557439 RAB1BQ9H0U4 201 aa13.89□□□□□ -0.19
XRCC3-218ENST00000557439 NCOR2Q9Y618 2525 aa13.89□□□□□ -0.19
XRCC3-218ENST00000557439 HLA-DMBP28068 263 aa13.88□□□□□ -0.19
XRCC3-218ENST00000557439 RNF5Q99942 180 aa13.88□□□□□ -0.19
XRCC3-218ENST00000557439 GOLT1BQ9Y3E0 138 aa13.88□□□□□ -0.19
XRCC3-218ENST00000557439 CHD8Q9HCK8 2581 aa13.88□□□□□ -0.19
XRCC3-218ENST00000557439 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.88□□□□□ -0.19
XRCC3-218ENST00000557439 A0A1W2PPR1 153 aa13.88□□□□□ -0.19
XRCC3-218ENST00000557439 NDUFA3O95167 84 aa13.88□□□□□ -0.19
XRCC3-218ENST00000557439 ZFP36P26651 326 aaKnown RBP13.88□□□□□ -0.19
XRCC3-218ENST00000557439 WI2-2373I1.2A0A1W2PRP0 233 aa13.87□□□□□ -0.19
XRCC3-218ENST00000557439 HAX1O00165 279 aa13.87□□□□□ -0.19
XRCC3-218ENST00000557439 C16orf54Q6UWD8 224 aa13.87□□□□□ -0.19
XRCC3-218ENST00000557439 VMO1Q7Z5L0 202 aa13.87□□□□□ -0.19
XRCC3-218ENST00000557439 MRPL52Q86TS9 123 aaKnown RBP13.87□□□□□ -0.19
XRCC3-218ENST00000557439 KLHDC1Q8N7A1 406 aa13.87□□□□□ -0.19
XRCC3-218ENST00000557439 C1RLQ9NZP8 487 aa13.87□□□□□ -0.19
XRCC3-218ENST00000557439 HIVEP3Q5T1R4 2406 aa13.87□□□□□ -0.19
XRCC3-218ENST00000557439 IGLV11-55A0A075B6I3 123 aa13.87□□□□□ -0.19
XRCC3-218ENST00000557439 A0A1B0GUT8 65 aa13.87□□□□□ -0.19
XRCC3-218ENST00000557439 ODF3BA8MYP8 253 aa13.87□□□□□ -0.19
XRCC3-218ENST00000557439 SYS1-DBNDD2H3BUS1 97 aa13.87□□□□□ -0.19
XRCC3-218ENST00000557439 FAM106CPP0CH98 169 aa13.87□□□□□ -0.19
XRCC3-218ENST00000557439 FAM106AQ4KMX7 169 aa13.87□□□□□ -0.19
XRCC3-218ENST00000557439 TMEM75Q8N9X5 138 aa13.87□□□□□ -0.19
XRCC3-218ENST00000557439 NPBQ8NG41 125 aa13.87□□□□□ -0.19
XRCC3-218ENST00000557439 Q8TAT8 98 aa13.87□□□□□ -0.19
XRCC3-218ENST00000557439 ARPC1AQ92747 370 aa13.87□□□□□ -0.19
XRCC3-218ENST00000557439 TIMD4Q96H15 378 aa13.87□□□□□ -0.19
XRCC3-218ENST00000557439 SOX21Q9Y651 276 aaPredicted RBP13.87□□□□□ -0.19
XRCC3-218ENST00000557439 UNQ5815/PRO19632Q6UWF5 114 aa13.86□□□□□ -0.19
XRCC3-218ENST00000557439 TMEM213A2RRL7 107 aa13.86□□□□□ -0.19
XRCC3-218ENST00000557439 PRTN3P24158 256 aa13.85□□□□□ -0.19
XRCC3-218ENST00000557439 FXYD7P58549 80 aa13.85□□□□□ -0.19
XRCC3-218ENST00000557439 FBXL19-AS1Q494R0 122 aa13.85□□□□□ -0.19
XRCC3-218ENST00000557439 NDFIP1Q9BT67 221 aa13.85□□□□□ -0.19
XRCC3-218ENST00000557439 CEACAM3P40198 252 aa13.85□□□□□ -0.19
XRCC3-218ENST00000557439 MFAP4P55083 255 aa13.85□□□□□ -0.19
XRCC3-218ENST00000557439 ERASQ7Z444 233 aa13.85□□□□□ -0.19
XRCC3-218ENST00000557439 LOC389332A0A1B0GUA5 103 aa13.84□□□□□ -0.19
XRCC3-218ENST00000557439 SERTM2A0A1B0GWG4 89 aa13.84□□□□□ -0.19
XRCC3-218ENST00000557439 C21orf62Q9NYP8 219 aa13.84□□□□□ -0.19
XRCC3-218ENST00000557439 SPTAN1Q13813 2472 aaKnown RBP13.84□□□□□ -0.19
XRCC3-218ENST00000557439 LOXL1Q08397 574 aaPredicted RBP13.84□□□□□ -0.19
XRCC3-218ENST00000557439 C11orf71Q6IPW1 123 aa13.84□□□□□ -0.19
XRCC3-218ENST00000557439 CHCHD1Q96BP2 118 aaKnown RBP13.84□□□□□ -0.19
XRCC3-218ENST00000557439 SRSF8Q9BRL6 282 aaKnown RBP13.84□□□□□ -0.19
XRCC3-218ENST00000557439 ZFP30Q9Y2G7 519 aa13.84□□□□□ -0.19
XRCC3-218ENST00000557439 FAM231BA6NCW3 169 aa13.83□□□□□ -0.19
XRCC3-218ENST00000557439 K7EQM0 130 aa13.83□□□□□ -0.19
XRCC3-218ENST00000557439 DMRTA1Q5VZB9 504 aa13.83□□□□□ -0.19
XRCC3-218ENST00000557439 ZNF562Q6V9R5 426 aa13.83□□□□□ -0.19
XRCC3-218ENST00000557439 LYZL1Q6UWQ5 148 aa13.83□□□□□ -0.2
XRCC3-218ENST00000557439 NEU4Q8WWR8 484 aaPredicted RBP13.83□□□□□ -0.2
XRCC3-218ENST00000557439 MAP1AP78559 2803 aaPredicted RBP13.83□□□□□ -0.2
XRCC3-218ENST00000557439 IGHV3OR16-13A0A075B7E8 117 aa13.82□□□□□ -0.2
XRCC3-218ENST00000557439 IGHV3-74A0A0B4J1X5 117 aa13.82□□□□□ -0.2
XRCC3-218ENST00000557439 IGHV3-66A0A0C4DH42 116 aa13.82□□□□□ -0.2
XRCC3-218ENST00000557439 VGLL1Q99990 258 aa13.82□□□□□ -0.2
XRCC3-218ENST00000557439 AAMDCQ9H7C9 122 aa13.82□□□□□ -0.2
XRCC3-218ENST00000557439 SH2D1AO60880 128 aa13.82□□□□□ -0.2
XRCC3-218ENST00000557439 EGR2P11161 476 aaPredicted RBP13.82□□□□□ -0.2
XRCC3-218ENST00000557439 NCR2O95944 276 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms