RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 IGKV3-15P01624 115 aa3.69□□□□□ -1.82
ATXN3-246ENST00000557030 IGHG3P01860 377 aa3.69□□□□□ -1.82
ATXN3-246ENST00000557030 HLA-DRB1P01911 266 aa3.69□□□□□ -1.82
ATXN3-246ENST00000557030 IGHV1-2P23083 117 aa3.69□□□□□ -1.82
ATXN3-246ENST00000557030 SUB1P53999 127 aaKnown RBP eCLIP3.69□□□□□ -1.82
ATXN3-246ENST00000557030 MFAP2P55001 183 aa3.69□□□□□ -1.82
ATXN3-246ENST00000557030 TCL1AP56279 114 aa3.69□□□□□ -1.82
ATXN3-246ENST00000557030 UBE2L3P68036 154 aaKnown RBP3.69□□□□□ -1.82
ATXN3-246ENST00000557030 ERHP84090 104 aaKnown RBP3.69□□□□□ -1.82
ATXN3-246ENST00000557030 FXYD3Q14802 87 aa3.69□□□□□ -1.82
ATXN3-246ENST00000557030 GUSBP1Q15486 140 aa3.69□□□□□ -1.82
ATXN3-246ENST00000557030 ALKBH6Q3KRA9 238 aa3.69□□□□□ -1.82
ATXN3-246ENST00000557030 RPL39P5Q59GN2 51 aa3.69□□□□□ -1.82
ATXN3-246ENST00000557030 LRRC10Q5BKY1 277 aa3.69□□□□□ -1.82
ATXN3-246ENST00000557030 RNASEKQ6P5S7 137 aaKnown RBP3.69□□□□□ -1.82
ATXN3-246ENST00000557030 IGFL2Q6UWQ7 119 aa3.69□□□□□ -1.82
ATXN3-246ENST00000557030 C12orf54Q6X4T0 127 aa3.69□□□□□ -1.82
ATXN3-246ENST00000557030 Q6ZR03 302 aa3.69□□□□□ -1.82
ATXN3-246ENST00000557030 ZNF826PQ6ZT77 177 aa3.69□□□□□ -1.82
ATXN3-246ENST00000557030 SMIM15Q7Z3B0 74 aa3.69□□□□□ -1.82
ATXN3-246ENST00000557030 OR4A5Q8NH83 315 aa3.69□□□□□ -1.82
ATXN3-246ENST00000557030 ZNF596Q8TC21 504 aa3.69□□□□□ -1.82
ATXN3-246ENST00000557030 SNRNP40Q96DI7 357 aaKnown RBP3.69□□□□□ -1.82
ATXN3-246ENST00000557030 RCHY1Q96PM5 261 aa3.69□□□□□ -1.82
ATXN3-246ENST00000557030 PMCHL2Q9BQD1 86 aa3.69□□□□□ -1.82
ATXN3-246ENST00000557030 ALKBH7Q9BT30 221 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-246ENST00000557030 CLEC7AQ9BXN2 247 aa3.69□□□□□ -1.82
ATXN3-246ENST00000557030 RNASE7Q9H1E1 156 aaKnown RBP3.69□□□□□ -1.82
ATXN3-246ENST00000557030 MS4A6AQ9H2W1 248 aa3.69□□□□□ -1.82
ATXN3-246ENST00000557030 ZNF430Q9H8G1 570 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-246ENST00000557030 TNFRSF19Q9NS68 423 aa3.69□□□□□ -1.82
ATXN3-246ENST00000557030 ZNF492Q9P255 531 aa3.69□□□□□ -1.82
ATXN3-246ENST00000557030 CLCF1Q9UBD9 225 aa3.69□□□□□ -1.82
ATXN3-246ENST00000557030 AMMECR1Q9Y4X0 333 aaPredicted RBP3.69□□□□□ -1.82
ATXN3-246ENST00000557030 TENM4Q6N022 2769 aa3.68□□□□□ -1.82
ATXN3-246ENST00000557030 IGKV1D-17A0A075B6S4 117 aa3.68□□□□□ -1.82
ATXN3-246ENST00000557030 IGLV9-49A0A0B4J1Y8 123 aa3.68□□□□□ -1.82
ATXN3-246ENST00000557030 SPAARA0A1B0GVQ0 90 aa3.68□□□□□ -1.82
ATXN3-246ENST00000557030 A0A1B0GXF2 115 aa3.68□□□□□ -1.82
ATXN3-246ENST00000557030 OR4C46A6NHA9 309 aa3.68□□□□□ -1.82
ATXN3-246ENST00000557030 C2orf70A6NJV1 201 aa3.68□□□□□ -1.82
ATXN3-246ENST00000557030 PEX7O00628 323 aa3.68□□□□□ -1.82
ATXN3-246ENST00000557030 CRXO43186 299 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-246ENST00000557030 SPINK4O60575 86 aa3.68□□□□□ -1.82
ATXN3-246ENST00000557030 LYZL6O75951 148 aa3.68□□□□□ -1.82
ATXN3-246ENST00000557030 IGLV1-44P01699 117 aa3.68□□□□□ -1.82
ATXN3-246ENST00000557030 APOA2P02652 100 aa3.68□□□□□ -1.82
ATXN3-246ENST00000557030 PPBPP02775 128 aa3.68□□□□□ -1.82
ATXN3-246ENST00000557030 PRB1P04280 392 aa3.68□□□□□ -1.82
ATXN3-246ENST00000557030 FRMD6-AS1P0C7T7 363 aa3.68□□□□□ -1.82
ATXN3-246ENST00000557030 CECR9P0C854 216 aa3.68□□□□□ -1.82
ATXN3-246ENST00000557030 SAA2P0DJI9 122 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-246ENST00000557030 CGB3P0DN86 165 aa3.68□□□□□ -1.82
ATXN3-246ENST00000557030 CGB7P0DN87 165 aa3.68□□□□□ -1.82
ATXN3-246ENST00000557030 RNASE2P10153 161 aaKnown RBP3.68□□□□□ -1.82
ATXN3-246ENST00000557030 HINT1P49773 126 aaPredicted RBP3.68□□□□□ -1.82
ATXN3-246ENST00000557030 GNG10P50151 68 aa3.68□□□□□ -1.82
ATXN3-246ENST00000557030 RBX1P62877 108 aa3.68□□□□□ -1.82
ATXN3-246ENST00000557030 HBBP68871 147 aa3.68□□□□□ -1.82
ATXN3-246ENST00000557030 RHOGP84095 191 aa3.68□□□□□ -1.82
ATXN3-246ENST00000557030 SLAQ13239 276 aa3.68□□□□□ -1.82
ATXN3-246ENST00000557030 TNXAQ16473 311 aa3.68□□□□□ -1.82
ATXN3-246ENST00000557030 LTC4SQ16873 150 aa3.68□□□□□ -1.82
ATXN3-246ENST00000557030 Q56UQ5 140 aa3.68□□□□□ -1.82
ATXN3-246ENST00000557030 C10orf113Q5VZT2 155 aa3.68□□□□□ -1.82
ATXN3-246ENST00000557030 SLC25A34Q6PIV7 304 aa3.68□□□□□ -1.82
ATXN3-246ENST00000557030 VKORC1L1Q8N0U8 176 aa3.68□□□□□ -1.82
ATXN3-246ENST00000557030 FAM19A2Q8N3H0 131 aa3.68□□□□□ -1.82
ATXN3-246ENST00000557030 TPRX1Q8N7U7 411 aa3.68□□□□□ -1.82
ATXN3-246ENST00000557030 MAPKAPK5-AS1Q8N8E1 139 aa3.68□□□□□ -1.82
ATXN3-246ENST00000557030 DEFB124Q8NES8 71 aa3.68□□□□□ -1.82
ATXN3-246ENST00000557030 NUP35Q8NFH5 326 aa3.68□□□□□ -1.82
ATXN3-246ENST00000557030 VSTM2AQ8TAG5 236 aa3.68□□□□□ -1.82
ATXN3-246ENST00000557030 FAM222BQ8WU58 562 aa3.68□□□□□ -1.82
ATXN3-246ENST00000557030 FMC1Q96HJ9 113 aa3.68□□□□□ -1.82
ATXN3-246ENST00000557030 DCTN5Q9BTE1 182 aa3.68□□□□□ -1.82
ATXN3-246ENST00000557030 PAXXQ9BUH6 204 aa3.68□□□□□ -1.82
ATXN3-246ENST00000557030 HINT2Q9BX68 163 aa3.68□□□□□ -1.82
ATXN3-246ENST00000557030 Q9H8V8 135 aa3.68□□□□□ -1.82
ATXN3-246ENST00000557030 LINC00574Q9H8X3 128 aa3.68□□□□□ -1.82
ATXN3-246ENST00000557030 HSPB8Q9UJY1 196 aa3.68□□□□□ -1.82
ATXN3-246ENST00000557030 ARHGAP21Q5T5U3 1957 aa3.68□□□□□ -1.82
ATXN3-246ENST00000557030 CNTRLQ7Z7A1 2325 aa3.67□□□□□ -1.82
ATXN3-246ENST00000557030 DOPEY1Q5JWR5 2465 aa3.67□□□□□ -1.82
ATXN3-246ENST00000557030 AHCTF1Q8WYP5 2266 aa3.67□□□□□ -1.82
ATXN3-246ENST00000557030 IGHV3-64DA0A0J9YX35 117 aa3.67□□□□□ -1.82
ATXN3-246ENST00000557030 TEX50A0A1B0GTY4 177 aa3.67□□□□□ -1.82
ATXN3-246ENST00000557030 A0A1B0GW15 77 aa3.67□□□□□ -1.82
ATXN3-246ENST00000557030 TCRBV4S1A1TA0A5B7 111 aa3.67□□□□□ -1.82
ATXN3-246ENST00000557030 PSMB11A5LHX3 300 aa3.67□□□□□ -1.82
ATXN3-246ENST00000557030 HIGD1CA8MV81 97 aa3.67□□□□□ -1.82
ATXN3-246ENST00000557030 K7ERU9 68 aa3.67□□□□□ -1.82
ATXN3-246ENST00000557030 P01737 135 aa3.67□□□□□ -1.82
ATXN3-246ENST00000557030 IGHV3-13P01766 116 aa3.67□□□□□ -1.82
ATXN3-246ENST00000557030 IGLL1P15814 213 aa3.67□□□□□ -1.82
ATXN3-246ENST00000557030 FABP6P51161 128 aa3.67□□□□□ -1.82
ATXN3-246ENST00000557030 CCL11P51671 97 aa3.67□□□□□ -1.82
ATXN3-246ENST00000557030 SLC35B1P78383 322 aa3.67□□□□□ -1.82
ATXN3-246ENST00000557030 HIST1H1AQ02539 215 aaPredicted RBP3.67□□□□□ -1.82
ATXN3-246ENST00000557030 VAMP3Q15836 100 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms