RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 TRBV7-1A0A0A6YYK4 115 aa3.46□□□□□ -1.86
SRP54-212ENST00000556992 IGHV3-21A0A0B4J1V1 117 aa3.46□□□□□ -1.86
SRP54-212ENST00000556992 A0A0U1RQK1 487 aa3.46□□□□□ -1.86
SRP54-212ENST00000556992 LOC105371267A0A1B0GV96 52 aa3.46□□□□□ -1.86
SRP54-212ENST00000556992 WI2-2373I1.2A0A1W2PRP0 233 aa3.46□□□□□ -1.86
SRP54-212ENST00000556992 C9JCJ5 164 aa3.46□□□□□ -1.86
SRP54-212ENST00000556992 BRI3O95415 125 aa3.46□□□□□ -1.86
SRP54-212ENST00000556992 TGFAP01135 160 aa3.46□□□□□ -1.86
SRP54-212ENST00000556992 IGKV1-17P01599 117 aa3.46□□□□□ -1.86
SRP54-212ENST00000556992 CTSGP08311 255 aa3.46□□□□□ -1.86
SRP54-212ENST00000556992 OR10J4P0C629 311 aa3.46□□□□□ -1.86
SRP54-212ENST00000556992 HIST1H1EP10412 219 aaKnown RBP3.46□□□□□ -1.86
SRP54-212ENST00000556992 CRYBB3P26998 211 aa3.46□□□□□ -1.86
SRP54-212ENST00000556992 RPL35P42766 123 aaKnown RBP3.46□□□□□ -1.86
SRP54-212ENST00000556992 GNG4P50150 75 aa3.46□□□□□ -1.86
SRP54-212ENST00000556992 RANP62826 216 aaKnown RBP3.46□□□□□ -1.86
SRP54-212ENST00000556992 ATP5G2Q06055 141 aa3.46□□□□□ -1.86
SRP54-212ENST00000556992 ELOBQ15370 118 aa3.46□□□□□ -1.86
SRP54-212ENST00000556992 Q56UQ5 140 aa3.46□□□□□ -1.86
SRP54-212ENST00000556992 KLF17Q5JT82 389 aaPredicted RBP3.46□□□□□ -1.86
SRP54-212ENST00000556992 ASPHD1Q5U4P2 390 aa3.46□□□□□ -1.86
SRP54-212ENST00000556992 KRTAP5-4Q6L8H1 288 aa3.46□□□□□ -1.86
SRP54-212ENST00000556992 ZNF343Q6P1L6 599 aa3.46□□□□□ -1.86
SRP54-212ENST00000556992 C19orf35Q6ZS72 473 aa3.46□□□□□ -1.86
SRP54-212ENST00000556992 LINC01551Q86U37 167 aa3.46□□□□□ -1.86
SRP54-212ENST00000556992 ZNF329Q86UD4 541 aa3.46□□□□□ -1.86
SRP54-212ENST00000556992 BPIFA4PQ86YQ2 179 aa3.46□□□□□ -1.86
SRP54-212ENST00000556992 LYPD1Q8N2G4 141 aa3.46□□□□□ -1.86
SRP54-212ENST00000556992 TEX29Q8N6K0 151 aa3.46□□□□□ -1.86
SRP54-212ENST00000556992 C5orf56Q8N8D9 126 aa3.46□□□□□ -1.86
SRP54-212ENST00000556992 OCC1Q8TAD7 63 aa3.46□□□□□ -1.86
SRP54-212ENST00000556992 ISOC2Q96AB3 205 aa3.46□□□□□ -1.86
SRP54-212ENST00000556992 FXYD5Q96DB9 178 aa3.46□□□□□ -1.86
SRP54-212ENST00000556992 FAM210BQ96KR6 192 aa3.46□□□□□ -1.86
SRP54-212ENST00000556992 YPEL4Q96NS1 127 aa3.46□□□□□ -1.86
SRP54-212ENST00000556992 SHANK2-AS3Q9BTD1 123 aa3.46□□□□□ -1.86
SRP54-212ENST00000556992 FAM103A1Q9BTL3 118 aaKnown RBP3.46□□□□□ -1.86
SRP54-212ENST00000556992 SLC25A39Q9BZJ4 359 aaPredicted RBP3.46□□□□□ -1.86
SRP54-212ENST00000556992 BIN3Q9NQY0 253 aa3.46□□□□□ -1.86
SRP54-212ENST00000556992 EPDR1Q9UM22 224 aa3.46□□□□□ -1.86
SRP54-212ENST00000556992 MOB4Q9Y3A3 225 aa3.46□□□□□ -1.86
SRP54-212ENST00000556992 CACNA1DQ01668 2161 aa3.46□□□□□ -1.86
SRP54-212ENST00000556992 PKDREJQ9NTG1 2253 aa3.46□□□□□ -1.86
SRP54-212ENST00000556992 DYSFO75923 2080 aa3.45□□□□□ -1.86
SRP54-212ENST00000556992 MALRD1Q5VYJ5 2156 aa3.45□□□□□ -1.86
SRP54-212ENST00000556992 MAP1AP78559 2803 aaPredicted RBP3.45□□□□□ -1.86
SRP54-212ENST00000556992 ICE1Q9Y2F5 2266 aa3.45□□□□□ -1.86
SRP54-212ENST00000556992 IGHV3OR16-10A0A075B7F0 116 aa3.45□□□□□ -1.86
SRP54-212ENST00000556992 TRBV9A0A0B4J1U6 114 aa3.45□□□□□ -1.86
SRP54-212ENST00000556992 TRAV41A0A0B4J266 112 aa3.45□□□□□ -1.86
SRP54-212ENST00000556992 PGPA6NDG6 321 aa3.45□□□□□ -1.86
SRP54-212ENST00000556992 A6NDX4 124 aa3.45□□□□□ -1.86
SRP54-212ENST00000556992 FAM223BA6NKX1 122 aa3.45□□□□□ -1.86
SRP54-212ENST00000556992 H3BUA1 57 aa3.45□□□□□ -1.86
SRP54-212ENST00000556992 OR2J3O76001 311 aa3.45□□□□□ -1.86
SRP54-212ENST00000556992 IGKV3-20P01619 116 aa3.45□□□□□ -1.86
SRP54-212ENST00000556992 IGF1P05019 195 aa3.45□□□□□ -1.86
SRP54-212ENST00000556992 CLEC3BP05452 202 aa3.45□□□□□ -1.86
SRP54-212ENST00000556992 S100A6P06703 90 aa3.45□□□□□ -1.86
SRP54-212ENST00000556992 PFN1P07737 140 aaKnown RBP3.45□□□□□ -1.86
SRP54-212ENST00000556992 IGHV4-38-2P0DP08 117 aa3.45□□□□□ -1.86
SRP54-212ENST00000556992 RPS10P46783 165 aaKnown RBP3.45□□□□□ -1.86
SRP54-212ENST00000556992 GALR1P47211 349 aa3.45□□□□□ -1.86
SRP54-212ENST00000556992 RAB9AP51151 201 aa3.45□□□□□ -1.86
SRP54-212ENST00000556992 CNN1P51911 297 aaKnown RBP3.45□□□□□ -1.86
SRP54-212ENST00000556992 CRIP2P52943 208 aaPredicted RBP3.45□□□□□ -1.86
SRP54-212ENST00000556992 LYZP61626 148 aa3.45□□□□□ -1.86
SRP54-212ENST00000556992 RHOGP84095 191 aa3.45□□□□□ -1.86
SRP54-212ENST00000556992 RPL19P84098 196 aaKnown RBP3.45□□□□□ -1.86
SRP54-212ENST00000556992 KIAA0141Q14154 515 aaPredicted RBP3.45□□□□□ -1.86
SRP54-212ENST00000556992 GFI1BQ5VTD9 330 aa3.45□□□□□ -1.86
SRP54-212ENST00000556992 CYB5R2Q6BCY4 276 aa3.45□□□□□ -1.86
SRP54-212ENST00000556992 BRD3OSQ6XYD6 125 aa3.45□□□□□ -1.86
SRP54-212ENST00000556992 ZGRF1Q86YA3 2104 aa3.45□□□□□ -1.86
SRP54-212ENST00000556992 FAM223AQ8IWN6 122 aa3.45□□□□□ -1.86
SRP54-212ENST00000556992 ARL6IP6Q8N6S5 226 aa3.45□□□□□ -1.86
SRP54-212ENST00000556992 ZNF491Q8N8L2 437 aa3.45□□□□□ -1.86
SRP54-212ENST00000556992 OR4F17Q8NGA8 305 aa3.45□□□□□ -1.86
SRP54-212ENST00000556992 OR10G8Q8NGN5 311 aa3.45□□□□□ -1.86
SRP54-212ENST00000556992 CMTM2Q8TAZ6 248 aa3.45□□□□□ -1.86
SRP54-212ENST00000556992 ZNF502Q8TBZ5 544 aa3.45□□□□□ -1.86
SRP54-212ENST00000556992 NRGNQ92686 78 aa3.45□□□□□ -1.86
SRP54-212ENST00000556992 EEF1AKMT3Q96AZ1 226 aa3.45□□□□□ -1.86
SRP54-212ENST00000556992 RNF125Q96EQ8 232 aa3.45□□□□□ -1.86
SRP54-212ENST00000556992 SFRP2Q96HF1 295 aa3.45□□□□□ -1.86
SRP54-212ENST00000556992 USMG5Q96IX5 58 aa3.45□□□□□ -1.86
SRP54-212ENST00000556992 HSPB9Q9BQS6 159 aa3.45□□□□□ -1.86
SRP54-212ENST00000556992 PYGO2Q9BRQ0 406 aa3.45□□□□□ -1.86
SRP54-212ENST00000556992 CHRDL1Q9BU40 450 aa3.45□□□□□ -1.86
SRP54-212ENST00000556992 ELOVL1Q9BW60 279 aa3.45□□□□□ -1.86
SRP54-212ENST00000556992 OTORQ9NRC9 128 aa3.45□□□□□ -1.86
SRP54-212ENST00000556992 KLF12Q9Y4X4 402 aa3.45□□□□□ -1.86
SRP54-212ENST00000556992 URGCP-MRPS24S4R325 110 aa3.45□□□□□ -1.86
SRP54-212ENST00000556992 ABCA4P78363 2273 aa3.45□□□□□ -1.86
SRP54-212ENST00000556992 CCDC168Q8NDH2 2452 aa3.45□□□□□ -1.86
SRP54-212ENST00000556992 ESPL1Q14674 2120 aa3.44□□□□□ -1.86
SRP54-212ENST00000556992 HEATR1Q9H583 2144 aaKnown RBP3.44□□□□□ -1.86
SRP54-212ENST00000556992 HIVEP3Q5T1R4 2406 aa3.44□□□□□ -1.86
SRP54-212ENST00000556992 TRBV19A0A075B6N1 114 aa3.44□□□□□ -1.86
SRP54-212ENST00000556992 TRAV9-1A0A075B6T8 112 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms